Photosynthetic carbon reduction (Arabidopsis thaliana)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none ChloroplastLightCalvin Cycle(Dark reactions)LightLight reactionsPhotosystem IICAB3LHB1B2CAB2LHB1B1CAB1Photosystem IFerredoxinFerredoxin-NADP reductaseP700CO2ATP SynthaseH+Fructose 6PSucroseO2RCANADPADP3-PGAPlastoquinoneADPATPRuBPATPPT2glycoxylateATPATPGLP1P-glycolatePlastocyaninNADPHGlucose-UDPTriose-PGlycolateRbcS1BRubiscoRbS1AcRbcS2BRbcS3BRbcLName: Photosynthetic carbon reductionLast Modified: 5/9/2012Organism: Arabidopsis thaliana


Description

No description

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Quality Tags

Image:MissingXref.pngAnnotate nodes
Image:MissingDescription.pngAdd description
Image:Curated.pngApproved version

Ontology Terms

Pathway Ontology : disease pathway
 

Bibliography

  1. Lubert Stryer; ''Biochemistry''; Book Chapter 26: Photosynthesis, 1995
  2. Hankamer B, Barber J, Boekema EJ; ''STRUCTURE AND MEMBRANE ORGANIZATION OF PHOTOSYSTEM II IN GREEN PLANTS.''; Annu Rev Plant Physiol Plant Mol Biol, 1997 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
126352
Approved
view09:33, 23 April 2023EgonwLicense is CCZero
118333view13:09, 27 May 2021Mkutmonfixed publication ref
117247view09:59, 19 May 2021EweitzModified title
107040view14:08, 17 September 2019MaintBotChEBI identifier normalization
105895view11:31, 16 August 2019MkutmonHMDB identifier normalization
88319view15:38, 1 August 2016FehrhartOntology Term : 'photosynthesis pathway' added !
79803view16:23, 16 April 2015Mkutmonfixed unconnected line
71233view09:56, 16 October 2013EgonwAdded the 'Gramene Arabidopsis' for AT*-TAIR-G identifiers.
71004view16:16, 22 September 2013EgonwAdded a few identifiers, and cleaned up the oxygen/CO2 reactions to be more separate.
68453view19:37, 5 July 2013MaintBotUpdated to 2013 gpml schema
48305view04:20, 18 May 2012KhanspersUpdating PubChem xref
48175view22:58, 9 May 2012MaintBotAutomatic update of PubChem xrefs
40485view19:12, 1 March 2011MaintBotRemoved redundant pathway information and comments
38024view17:45, 30 July 2010MartijnVanIerselRubisco complex
37661view12:15, 18 June 2010MartijnVanIerselupdated plasto*
37660view12:00, 18 June 2010MartijnVanIerseladded some proteins of PSII
37659view11:51, 18 June 2010MartijnVanIerselPeriodical save, work in progress
37658view11:39, 18 June 2010MartijnVanIersellight reactions further specified
37218view21:30, 21 May 2010KhanspersModified categories
36800view14:11, 4 May 2010MartijnVanIerselRubisco side-reaction and sucrose synthesis
34945view12:59, 5 February 2010MartijnVanIerseladded missing id
34944view12:58, 5 February 2010MartijnVanIerseladded some missing database ids
34943view12:53, 5 February 2010MartijnVanIerselModified categories
34942view12:52, 5 February 2010MartijnVanIerselNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
3-PGAMetaboliteHMDB0000807 (HMDB)
ADPMetaboliteHMDB0001341 (HMDB)
ATP SynthaseGeneProduct
ATPGLP1GeneProductAT5G36700 (TAIR)
ATPMetaboliteHMDB0001532 (HMDB)
ATPPT2GeneProductAT3G01550 (TAIR)
CAB1GeneProductAT1G29930-TAIR-G (Gramene Arabidopsis)
CAB2GeneProductAT1G29920-TAIR-G (Gramene Arabidopsis)
CAB3GeneProductAT1G29910-TAIR-G (Gramene Arabidopsis)
CO2MetaboliteHMDB0001967 (HMDB)
FerredoxinGeneProduct
Ferredoxin-NADP reductaseGeneProduct
Fructose 6PMetaboliteHMDB0000124 (HMDB)
Glucose-UDPMetaboliteCHEBI:18066 (ChEBI)
GlycolateMetaboliteHMDB0000115 (HMDB)
H+Metabolite1010 (Chemspider)
LHB1B1GeneProductAT2G34430-TAIR-G (Gramene Arabidopsis)
LHB1B2GeneProductAT2G34420-TAIR-G (Gramene Arabidopsis)
NADPHMetaboliteHMDB0000221 (HMDB)
NADPMetaboliteHMDB0000217 (HMDB)
O2MetaboliteHMDB0001377 (HMDB)
P-glycolateMetaboliteHMDB0000816 (HMDB)
P700GeneProduct
PlastocyaninGeneProduct
PlastoquinoneMetabolite5375177 (PubChem-compound)
RCAGeneProductAT2G39730-TAIR-G (Gramene Arabidopsis)
RbS1AcGeneProductAT1G67090-TAIR-G (Gramene Arabidopsis)
RbcLGeneProduct
RbcS1BGeneProductAT5G38430-TAIR-G (Gramene Arabidopsis)
RbcS2BGeneProductAT5G38420-TAIR-G (Gramene Arabidopsis)
RbcS3BGeneProductAT5G38410-TAIR-G (Gramene Arabidopsis)
RuBPMetaboliteCHEBI:16710 (ChEBI)
RubiscoGeneProductAT2G07732-TAIR-G (Gramene Arabidopsis)
SucroseMetaboliteHMDB0000258 (HMDB)
Triose-PMetabolite
glycoxylateMetabolite

Annotated Interactions

No annotated interactions

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