Flowering time pathway (Hordeum vulgare)

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To be integrated: 7, 13PhotoperiodHvCENHvLUX1VRN-H1HvGIVRN-H2HvCO2HvELF3(Eam8)VRN-H3(HvFT1)HvCO9Ppd-H2(HvFT3)HvCO1HvFT4Ppd-H1(HvPRR7)HvFT223225, 9, 14, 172, 4, 10, 228, 212082, 14, 2211, 231, 8, 1215, 193, 5, 1716, 186FloweringLegendInhibitionPromotionno direct interaction provenLong Days (LD)Short Days (SD)VernalizationCircadian clockPathway name


Description

Barley (Hordeum vulgare L.), a cereal species with major economic and agricultural impact, is a facultative long-day plant, i.e. it flowers earlier in response to long days than to short days. Flowering time genes of the photoperiod, vernalization and circadian clock pathways are best studied in barley. The Ppd-H1 gene, a pseudo-response regulator gene, is thought to be key for flowering induction under long days. Further important genes which convey flowering in barley under both photoperiods are homologs of FLOWERING LOCUS T (FT) and CONSTANS (CO). Flowering in response to vernalization is economically important in temperate cereals like barley and wheat and is controlled by the interaction of Vrn-H1 and Vrn-H2.

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Bibliography

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History

View all...
CompareRevisionActionTimeUserComment
128704view22:01, 20 February 2024EgonwFixed the data source of a few identifiers
125287view16:44, 31 January 2023LarsgwAdd DOI to reference
117227view09:42, 19 May 2021EweitzModified title
105014view08:28, 28 June 2019FehrhartPathway nodes to labels (there are no pathways to link)
105013view08:19, 28 June 2019Fehrhartconnected lines
88461view17:51, 9 August 2016MbluemelOntology Term : 'signaling pathway' added !
88460view17:50, 9 August 2016MbluemelOntology Term : 'PW:0001115' removed !
81146view14:34, 28 July 2015Mbluemelupdated interactions, connected lines
81145view09:27, 28 July 2015MbluemelModified description
78777view23:59, 26 January 2015AlexanderPicoOntology Term : 'non-visual phototransduction pathway' added !
73627view21:33, 8 February 2014MaintBotremoving false data nodes
73626view21:29, 8 February 2014MaintBotRemoving double-lined rectangle
73625view21:25, 8 February 2014MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
HvCENGeneProductK7QT26 (Uniprot-TrEMBL)
HvCO1GeneProductMLOC_6921 (Ensembl) Chromosome: 7H
HvCO2GeneProductQ8L581 (Uniprot-TrEMBL) Chromosome: 6H
HvCO9GeneProductMLOC_75450 (Ensembl)
HvELF3 (Eam8)GeneProductMLOC_75281 (Ensembl)
HvFT2GeneProductA0S6X4 (Uniprot-TrEMBL) Chromosome: 3H
HvFT4GeneProductMLOC_74854 (Ensembl) Chromosome: 2H
HvGIGeneProductMLOC_18291 (Ensembl)
HvLUX1GeneProductAK357505 (EMBL)
Ppd-H1 (HvPRR7)GeneProductMLOC_81154 (Ensembl)
  • pseudo-response regulator gene
  • Chromosome: 2H
Ppd-H2 (HvFT3)GeneProduct
  • Chromosome: 1H
  • pseudoresponse regulator gene
VRN-H1GeneProductMLOC_61901 (Ensembl)
  • MADS-box transcription factor
  • Chromosome: 5H
VRN-H2GeneProductQ68I23 (Uniprot-TrEMBL)
  • zinc finger motif and CCT domain
  • Chromosome: 4H
VRN-H3 (HvFT1)GeneProductMLOC_68576 (Ensembl) Chromosome: 7H

Annotated Interactions

No annotated interactions

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