Portal:Blau/PathwayAnalysis
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| - | [[Image:NetworkAnalysisPurine.png|left| | + | [[Image:NetworkAnalysisPurine.png|left|350px]] |
With the pathways from the Blau book (as well as with other pathways on WikiPathways), various data analysis approaches can be performed. | With the pathways from the Blau book (as well as with other pathways on WikiPathways), various data analysis approaches can be performed. | ||
For example scripts (in R), please visit [https://bigcat-um.github.io/PathwayAnalysisBlauBook/ PathwayAnalysisBlauBook]. | For example scripts (in R), please visit [https://bigcat-um.github.io/PathwayAnalysisBlauBook/ PathwayAnalysisBlauBook]. | ||
| - | The Figure on the left shows an example of network analysis, where known drug-target interactions from DrugBank have been added to the purine metabolism pathway. | + | The Figure on the left shows an example of network analysis with [https://cytoscape.org/ Cytoscape], where known drug-target interactions from [https://www.drugbank.ca/ DrugBank] using the [https://cytargetlinker.github.io/ CyTargetLinker app] have been added to the [https://www.wikipathways.org/index.php/Pathway:WP4224 purine metabolism pathway]. |
Current revision
With the pathways from the Blau book (as well as with other pathways on WikiPathways), various data analysis approaches can be performed.
For example scripts (in R), please visit PathwayAnalysisBlauBook.
The Figure on the left shows an example of network analysis with Cytoscape, where known drug-target interactions from DrugBank using the CyTargetLinker app have been added to the purine metabolism pathway.
