WikiPathways

From WikiPathways

(Difference between revisions)

Current revision

Try the New WikiPathways

Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will not be maintained for much longer.

Find Pathways

Search

Browse

Browse by species and category

You can search by:

Pathway name (Apoptosis)
Gene or protein name (p53)
Any page content (cancer)

Get Pathways

	Download Multiple formats and methods			Growth New pathways added each month

Edit Pathways

	Learn Play with the editor tools			Request Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

Deregulation of renin-angiotensin system by SARS-CoV infection (Mus musculus)

Image does not exist

Deregulation of renin-angiotensin system by SARS-CoV infection

Updates

November 2024 Release: 110 edits by 6 contributors and 9 new pathways.
October 2024 Release: 167 edits by 4 contributors and 2 new pathways.
September 2024 Release: 179 edits by 6 contributors and 4 new pathways.
August 2024 Release: 1,114 edits by 4 contributors and 1 new pathway.
July 2024 Release: 53 edits by 8 contributors and 3 new pathways.
June 2024 Release: 345 edits by 13 contributors and 4 new pathways.
May 2024 Release: 110 edits by 10 contributors and 6 new pathways.
April 2024 Release: 290 edits by 11 contributors and 2 new pathways.
March 2024 Release: 542 edits by 9 contributors and 10 new pathways.

more...

Discussions

No recent changes more...

Forum

Google group wikipathways-discuss

@@ Line 1: / Line 1: @@
-__NOEDITSECTION__ <!-- Turn off section editing -->
-__NOTOC__ <!-- Turn off Table of Contents  -->
 {|
+<!-- Special Notice Section-->
+<!--
 |-valign="top"
 |colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel blueFg">Sept 2010 Curation Jamboree Is On!</h2>
+<h2 class="frontPagePanel yellowFg">11 April 2019: Scheduled Downtime</h2>
-<font size=2>'''Have you always wanted to contribute to WikiPathways but didn't know where to start? Here's your chance! We are organizing our third curation event to improve the quality and extent of our pathways. Curation events are open to all registered WikiPathways users, no prior experience necessary! [[Curation_Jamboree_Sep_2010|More about the jamboree...]] [[Support_chat_channel|Join live forum...]]'''</font></div>
+<font size=2>'''We will be taking the site down for an hour at 24:00UTC on April 11th. We are switching over to new and improved infrastructure! Sorry for any inconveniences.'''</font></div>
+-->
+<!-- TECHNICAL DIFFICULTIES -->
+<!--
 |-valign="top"
-|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
+|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel redFg">Welcome to WikiPathways <sup>BETA</sup></h2>
+<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
-<font size=2>'''In the new tradition of [[wikipedia:Main_Page|Wikipedia]], WikiPathways is an open, public platform dedicated to the curation of biological pathways by and for the scientific community. [[WikiPathways:About|More about WikiPathways...]]'''</font></div>
+<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>
+-->
+<!-- ANNOUNCEMENTS -->
+<!--
+|-valign="top" align="center"
+|colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2>
+<font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div>
+-->
+<!-- Page Content -->
+|-valign="top"
+|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel greenFg">Try the New WikiPathways</h2>
+<font size=2>'''Visit https://wikipathways.org to see the new version of WikiPathways.''' This is the "classic" version of WikiPathways will not be maintained for much longer.
+</font></div>
 <div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel blueFg">Finding Pathways</h2>
+<h2 class="frontPagePanel blueFg">Find Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
 |rowspan="2" align="center" style="width:25%;"|
-|align="center" valign="top"|<big>'''Search'''</big>{{#googleCoop:}}
+|align="center" valign="top"|<big>'''Search'''</big><BR>{{#searchPathwaysBox:}}
 |rowspan="2" align="center" style="width:25%;"|
 |rowspan="2" align="center" style="width:25%;"|
-|rowspan="2" align="center" valign="top"|<big>'''Browse'''</big>{{#imgLink:Browse_thumb_200.jpg|200|center||special|BrowsePathwaysPage|Browse}}
+|rowspan="2" align="center" valign="top"|<big>'''Browse'''</big>{{#imgLink:Browse_thumb.png|200|center||special|BrowsePathwaysPage|Browse}}
 '''Browse by species and category'''
 |rowspan="2" align="center" style="width:25%;"|
@@ Line 33: / Line 51: @@
 |}
-<h2 class="frontPagePanel blueFg">Contributing New Pathways</h2>
+<h2 class="frontPagePanel blueFg">Get Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
 |rowspan="1" align="center" style="width:25%;"|
-|align="center" valign="top"|<big>'''Create'''</big>{{#imgLink:Create_thumb_160.jpg|160|center||special|CreatePathwayPage|Create}}
+|align="center" valign="top"|<big>'''Download'''</big>{{#imgLink:Download_label.png|215|center|||Download_Pathways|Download}}
-'''Create a new pathway page'''
+'''Multiple formats and methods'''
 |rowspan="1" align="center" style="width:25%;"|
 |rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" valign="top"|<big>'''Suggest'''</big>{{#imgLink:Wishlist_thumb_200.jpg|200|center||special|SpecialWishList|Wish list}}
+|rowspan="1" align="center" valign="top"|<big>'''Growth'''</big>{{#imgLink:Wp_growth_label.png|200|center|||WikiPathways:Statistics|Growth}}
-'''Add a pathway to the wish list'''
+'''New pathways added each month'''
 |rowspan="1" align="center" style="width:25%;"|
 |-
@@ Line 48: / Line 66: @@
 |}
-<h2 class="frontPagePanel blueFg">Sample Pathway Pages</h2>
+<h2 class="frontPagePanel blueFg">Edit Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
-|rowspan="1" align="center" style="width:4%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" valign="top" style="width:45%;"|<big>'''Sandbox'''</big>{{#imgLink:Sandbox_thumb_200.jpg|200|center||pathway|WP4|Sandbox}}
+|align="center" valign="top"|<big>'''Learn'''</big>{{#imgLink:AcademyPath.png|200|center||external|http://academy.wikipathways.org|WikiPathways Academy}}
 '''Play with the editor tools'''
-|rowspan="1" align="center" style="width:4%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" style="width:1%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|align="left" valign="top" style="width:45%;"|
+|align="center" valign="top"|<big>'''Request'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://github.com/wikipathways/pathway-curation-tasks/issues|Figure Conversion}}
-'''Check out the following pages:'''<br>
+'''Queue figures for conversion'''
-* [[Special:RecentPathwayChanges | Show recent changes]]
+|rowspan="1" align="center" style="width:25%;"|
-* [[Special:NewPathwaysPage | Show new pathways]]
+|-
-* [[Special:MostEditedPathwaysPage | Show most edited pathways]]
+|colspan="7"|
-* [[Special:PopularPathwaysPage | Show most viewed pathways]]
+|}
-* [[Special:SpecialWishList | Show pathway wish list]]
-'''For more information see the [[Help:Contents |Help pages]]'''
+<!-- SURVEY -->
-|rowspan="1" align="center" style="width:1%;"|
+{|style="width:100%;margin-top:3em;" border="0" cellspacing="2" cellpadding="1" align="center"
+|-
+|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel yellowFg">We want your feedback! A quick survey to help us focus development: [https://www.surveymonkey.com/r/wikipathways https://www.surveymonkey.com/r/wikipathways]</h2></div>
 |-
 |colspan="7"|
@@ Line 73: / Line 94: @@
 | valign="top"|
-<div class="frontPagePanel greenBg" style="width:90%;margin:1em;width=100%;">
+<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
-<h2 class="frontPagePanel greenFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}}
+<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}}
-<h2 class="frontPagePanel greenFg">Latest edits</h2><recentChanges class="greenBg" style="border:none" namespace='102' limit='3'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Edits|more...]]
+<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
-<h2 class="frontPagePanel greenFg">Latest discussions</h2><recentChanges class="greenBg" style="border:none" namespace='90' limit='3'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
+* '''November 2024 Release''': [[Special:RecentPathwayChanges|110 edits]] by [[WikiPathways:Statistics#Contribution_scores|6 contributors]] and [https://www.wikipathways.org/browse/new.html 9 new pathways].
-<h2 class="frontPagePanel greenFg">Forum</h2><rss>http://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=3</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss more...]
+* '''October 2024 Release''': [[Special:RecentPathwayChanges|167 edits]] by [[WikiPathways:Statistics#Contribution_scores|4 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-<h2 class="frontPagePanel greenFg">New!</h2>
+* '''September 2024 Release''': [[Special:RecentPathwayChanges|179 edits]] by [[WikiPathways:Statistics#Contribution_scores|6 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways].
-* WikiPathways biotransformation pathways described in [http://www.ncbi.nlm.nih.gov/pubmed/20708095 Drug Discovery Today]
+* '''August 2024 Release''': [[Special:RecentPathwayChanges|1,114 edits]] by [[WikiPathways:Statistics#Contribution_scores|4 contributors]] and [https://www.wikipathways.org/browse/new.html 1 new pathway].
-* [http://www.cirm.ca.gov/Announcement_072710 CIRM partners with WikiPathways]
+* '''July 2024 Release''': [[Special:RecentPathwayChanges|53 edits]] by [[WikiPathways:Statistics#Contribution_scores|8 contributors]] and [https://www.wikipathways.org/browse/new.html 3 new pathways].
-* '''2''' new species supported! ''([[Help:Databases|see all 21]])''
+* '''June 2024 Release''': [[Special:RecentPathwayChanges|345 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways].
-** [http://www.wikipathways.org/index.php?title=Special%3ABrowsePathwaysPage&browse=Sus+scrofa&browseCat=All+Categories Sus scrofa (Pig)]
+* '''May 2024 Release''': [[Special:RecentPathwayChanges|110 edits]] by [[WikiPathways:Statistics#Contribution_scores|10 contributors]] and [https://www.wikipathways.org/browse/new.html 6 new pathways].
-** [http://www.wikipathways.org/index.php?title=Special%3ABrowsePathwaysPage&browse=Mycobacterium+tuberculosis&browseCat=All+Categories Mycobacterium tuberculosis]
+* '''April 2024 Release''': [[Special:RecentPathwayChanges|290 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-* Ongoing: [http://socrates2.cgl.ucsf.edu/GenMAPP/wiki/Google_Summer_of_Code_2010 Google Summer of Code 2010!].
+* '''March 2024 Release''': [[Special:RecentPathwayChanges|542 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 10 new pathways].
-* [http://dx.plos.org/10.1371/journal.pone.0006447 PLoS ONE article] on WikiPathways [[Help:WikiPathways_Webservice|Web Services]].
+&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
-* '''100s''' of new inferred pathways!
+<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
+<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=2</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
-<h2 class="frontPagePanel greenFg">Community Interest</h2>
-Portals within WikiPathways for communities with focused pathway interests:
-* [[Portal:CIRM|CIRM]] stem cell pathways
-* [[Portal:Micronutrient|Micronutrient initiative]] nutrition pathways
-* [[Portal:GenMAPP|GenMAPP]] analysis pathways
-* [[Portal:BiGCaT|BiGCaT]] contributed pathways
-Want to start your own Portal? [[Contact_Us|Contact us!]]
-<h2 class="frontPagePanel greenFg">Statistics</h2>{{ #siteStats: class="greenBg" style="border: 0;"}}
 </div>
 |}
+__NOEDITSECTION__ <!-- Turn off section editing -->
+__NOTOC__ <!-- Turn off Table of Contents  -->

WikiPathways

From WikiPathways

Current revision

Try the New WikiPathways

Find Pathways

Get Pathways

Edit Pathways

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

Updates

Discussions

Forum

Views

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search

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