Help:WikiPathways RDF

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Current revision (17:35, 26 July 2017) (view source)
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Two subsets of pathways from WikiPathways are now available in the [http://www.w3.org/RDF/ RDF] format:
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#REDIRECT [[Portal:Semantic Web]]
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the [http://wikipathways.org/index.php?title=Special%3ABrowsePathways&browse=---&tag=Curation%3AAnalysisCollection&view=thumbs Curated] and the [http://wikipathways.org/index.php?title=Special%3ABrowsePathways&browse=---&tag=Curation%3AReactome_Approved&view=thumbs Reactome] collections.
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= Download RDF =
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The RDF can be [http://rdf.wikipathways.org/ downloaded].
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= Open PHACTS API =
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The [http://www.openphacts.org/ Open PHACTS projects] provides an alternative to work with the WikiPathways RDF, as it is loaded in the data cache of Open PHACTS. The [https://dev.openphacts.org/docs Open PHACTS API] provides various queries, like "give me all targets in a pathway". It requires a [https://dev.openphacts.org/signup (free) account] to use this system.
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= SPARQL Endpoint =
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There is also [http://sparql.wikipathways.org/ an (experimental) SPARQL endpoint] where data queries can be done. Example queries are available from [http://www.wikipathways.org/index.php/Help:WikiPathways_Sparql_queries this page].
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Current revision

  1. REDIRECT Portal:Semantic Web
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