Help:DataVisualizationInCytoscape

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UNDER CONSTRUCTION

Contents

1 Installation
2 Importing and mapping data
- 2.1 Data import
- 2.2 Identifier mapping with BridgeDb
3 Viewing data on pathways
- 3.1 Open WikiPathways in Cytoscape
- 3.2 Visual Styles

Installation

Install Cytoscape

Download Cytoscape here: http://www.cytoscape.org/.
Launch Cytoscape

Install WP Apps

Download and prepare tutorial data

Importing and mapping data

Data import

Identifier mapping with BridgeDb

Viewing data on pathways

Open WikiPathways in Cytoscape

Visual Styles

Retrieved from "https://classic.wikipathways.org/index.php/Help:DataVisualizationInCytoscape"

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