https://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&feed=atom&action=historyWikiPathways:General disclaimer - Revision history2024-03-29T12:27:38ZRevision history for this page on the wikiMediaWiki 1.13.1https://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=46471&oldid=prevAlexanderPico: Protected "WikiPathways:General disclaimer" [edit=sysop:move=sysop]2012-02-01T03:16:10Z<p>Protected "<a href="/index.php/WikiPathways:General_disclaimer" title="WikiPathways:General disclaimer">WikiPathways:General disclaimer</a>" [edit=sysop:move=sysop]</p>
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* Refer to [[WikiPathways:Privacy_policy|our P...'2008-10-13T21:07:41Z<p>Replacing page with '''We have nothing to disclaim at this time...'' <br> <br> * Refer to <a href="/index.php/WikiPathways:License_Terms" title="WikiPathways:License Terms">our License and Terms of Use</a> * Refer to [[WikiPathways:Privacy_policy|our P...'</p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== This page is under construction ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>''<ins class="diffchange diffchange-inline">We have nothing </ins>to <ins class="diffchange diffchange-inline">disclaim </ins>at this time...''</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline"><br></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">== Overview ==</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline"><br></ins></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">If you are like us, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At the same time, we recognize that they are important issues, especially when it comes to promoting and protecting data sharing in scientific domains. So, we have done our homework here at WikiPathways and have settled on an approach developed by [http://sciencecommons.org Science Commons]. We are going to do our best to explain the strategy in clear terms. Please feel free to give us feedback on these issues and voice your opinions and questions on the [http://groups.google.com/group/wikipathways-discuss WikiPathways discussion mailing list].</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* <ins class="diffchange diffchange-inline">Refer to [[</ins>WikiPathways<ins class="diffchange diffchange-inline">:License_Terms|</ins>our License and Terms of Use]] </div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* <ins class="diffchange diffchange-inline">Refer </ins>to [[<ins class="diffchange diffchange-inline">WikiPathways</ins>:<ins class="diffchange diffchange-inline">Privacy_policy|</ins>our <ins class="diffchange diffchange-inline">Privacy Policy</ins>]]</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">Our strategy has three main components:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* </del>''<del class="diffchange diffchange-inline">'The License''' - this is the legal code applicable </del>to <del class="diffchange diffchange-inline">the ''content'' </del>at <del class="diffchange diffchange-inline">WikiPathways. We are using the very permissive [http://creativecommons.org/licenses/by/3.0/legalcode CC-BY] license with ''terms of use'' specified in clear English. ''More details below...''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* '''Terms of Use''' - </del>this <del class="diffchange diffchange-inline">is where we define our own terms for how we expect WikiPathways content to be used. This is not a legally-binding code, but rather an explicit declaration of expectation that is enforceable by the entire community of content contributors and consumers. If you find someone violating the ''terms of use'', let us know and we'll let the community know that they are not playing fair and are not endorsed by our effort. We believe this approach will be less costly than legal action and, at the same </del>time<del class="diffchange diffchange-inline">, more effective at discouraging unfair use. ''More details below</del>...''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* <del class="diffchange diffchange-inline">'''Trademark''' - this is the really clever bit. We can use the trademark of ''</del>WikiPathways<del class="diffchange diffchange-inline">'' as badge of fair use. Anyone using or redistributing WikiPathways content under the terms of </del>our <del class="diffchange diffchange-inline">''license'' and ''terms of use'' can proudly display the WikiPathways trademark as evidence of being a trusted member of the community participating in our effort. If you are in violation of either our ''license'' or ''terms of use'' we can legally enforce the removal of our ''trademark'' and you will no longer be identified as a trusted member. We will actively discourage patronage of resources that can not be trusted. '''''This community is not so big... so you had better play fair!''''' ''More details below...''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">== The </del>License <del class="diffchange diffchange-inline">==</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">WikiPathways content is covered by the [http://creativecommons.org/licenses/by/3.0/ Creative Commons Attribution 3.0 Unported license], which states that you are free to share (copy, distribute </del>and <del class="diffchange diffchange-inline">transmit) and remix (adapt) the work as long as you attribute the work in the manner specified in our ''terms of use''. For any reuse or distribution, you must make clear to others the license terms of the work. The best way to do this is with a link to [http://creativecommons.org/licenses/by/3.0/ this web page]. Again, this license if fairly permissive, so you shouldn't feel paralyzed by legalese if you are interested in using or redistributing WikiPathways content. Just be sure to read the ''terms of use'' and if you have any questions about fair use, don't hesitate to [mailto:wikipathways-discuss@googlegroups.com contact us].</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">== </del>Terms of Use <del class="diffchange diffchange-inline">==</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">A common sense explanation of how we expect WikiPathways content to be used.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Contributing ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">When editing an existing pathway or creating a new pathway, your contributions to WikiPathways content should reflect your best understanding of the biology you are representing. Whenever possible, contributions should be referenced by published, peer-reviewed literature. You can transcribe content from the following resources with appropriate attribution:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* text books</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* research articles and reviews</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* public databases and pathway resources: KEGG and Reactome</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* trusted online resources, including wikipedia</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* your own research and hypotheses (reasonably tested)</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">You should ''not'' make contributions based on work presented by other researchers yet to be published or based on proprietary sources (purchased databases, company secrets, etc).</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Downloading ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">You can download WikiPathways content in any of the available data and image formats we provide, including but not limited to: gpml, mapp, text, eu.gene, html, png, svg, jpeg. But you must cite or give appropriate attribution. ''See Attribution below''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Using ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">You are free to use the pathway images in presentations, documents, websites and publications. You are free to use the pathway data in analyses, qualitative or quantitative. But you must cite or give appropriate attribution. ''See Attribution below''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Redistributing ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content, e.g., as art, on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. We think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Adapting, Dissecting, Augmenting ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">You are free to download, use and redistribute any part of a given pathway at WikiPathways according to the ''terms of use''. You are free to augment, extend and build upon the content outside of WikiPathways and then use or redistribute according to the ''terms of use''. You are free to edit, subtract from and change the content outside of WikiPathways and then use or redistribute according to the ''terms of use''. Of course, it is always better to make edits to the content within WikiPathways to grow the content and share alike, but this is not strictly required. If there is a feature or function you require in order to perform an edit to the content, do not hesitate to [mailto:wikipathways-discuss@googlegroups.com contact us</del>] <del class="diffchange diffchange-inline">and participate in the design and implementation of the new feature yourself. This is an open source project, after all!</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Attribution ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* When using or referencing WikiPathways or WikiPathways content in an article, you should cite our latest publication:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">Pico, A. R., Kelder, T., van Iersel, M. P., Hanspers, K., Conklin, B. R., and Evelo, C. (2008). Wikipathways: Pathway editing for the people. PLoS Biology, 6(7):e184+. [http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794</del>]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* <del class="diffchange diffchange-inline">When using, referencing or redistributing content, you should provide a hyperlink or printed URL </del>to <del class="diffchange diffchange-inline">the main page:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[<del class="diffchange diffchange-inline">http://www.wikipathways.org http://www.wikipathways.org]</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* When using, referencing or redistributing an individual pathway in an online medium, you should provide a hyperlink directly to the pathway, like so:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[<del class="diffchange diffchange-inline">http</del>:<del class="diffchange diffchange-inline">//www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis]</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* Feel free to use </del>our <del class="diffchange diffchange-inline">trademark (our logo) to indicate your participation in our community with using, referencing or redistributing WikiPathways content. ''See trademark terms below''</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* Attribution to individual contributors is not necessary. WikiPathways will track and display contributions from individual authors and curators to each pathway on each pathway page. So as long as hyperlinks are provided to WikiPathways, the evolving list of contributors will be indirectly referenced.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">== Trademark ==</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">The WikiPathways trademark (our logo) can be reproduced with any use and redistribution of WikiPathways content. You do not necessarily have to ask permission before using the logo, if you are confident that you satisfy the license and ''terms of use''. However, we always appreciate hearing about related efforts, so please drop us a line. We will have a wiki page dedicated to listing such efforts.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">If you do not satisfy the license or ''terms of use'' our first measure will be to contact you and request that you change your behavior. Failing that, we will require that you remove the WikiPathways trademark from your site or resource. We will also have a wiki page dedicated to listing these efforts as well :)</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">----</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== References ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* [http://sciencecommons.org/wp-content/uploads/freedom-to-research.pdf Freedom to Research</del>] <del class="diffchange diffchange-inline">- a clear explanation of the motivation behind the Science Commons Protocols for Implementing Open Access Data.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">* [http://sciencecommons.org/projects/publishing/open-access-data-protocol/ Open Access Data Protocol</del>] <del class="diffchange diffchange-inline">- a protocol for implementing Open Access Data by Science Commons.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">=== Definitions ===</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">; Content : The pathway information (in part or in whole) represented in data and image formats at WikiPathways.</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19070&oldid=prevAlexanderPico: /* Overview */2008-09-16T16:18:49Z<p><span class="autocomment">Overview</span></p>
<table style="background-color: white; color:black;">
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 16:18, 16 September 2008</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Our strategy has three main components:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Our strategy has three main components:</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* '''The License''' - this is the legal code applicable to the ''content'' at WikiPathways. We are using the very permissive [http://creativecommons.org/licenses/by/3.0/legalcode CC-BY] license with ''terms of use'' specified in clear English. ''More <del class="diffchange diffchange-inline">detail </del>below...''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* '''The License''' - this is the legal code applicable to the ''content'' at WikiPathways. We are using the very permissive [http://creativecommons.org/licenses/by/3.0/legalcode CC-BY] license with ''terms of use'' specified in clear English. ''More <ins class="diffchange diffchange-inline">details </ins>below...''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* '''Terms of Use''' - this is where we define our own terms for how we expect WikiPathways content to be used. This is not a legally-binding code, but rather an explicit declaration of expectation that is enforceable by the entire community of content contributors and consumers. If you find someone violating the ''terms of use'', let us know and we'll let the community know that they are not playing fair and are not endorsed by our effort. We believe this approach will be less costly than legal action and, at the same time, more effective at discouraging unfair use. ''More <del class="diffchange diffchange-inline">detail </del>below...''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* '''Terms of Use''' - this is where we define our own terms for how we expect WikiPathways content to be used. This is not a legally-binding code, but rather an explicit declaration of expectation that is enforceable by the entire community of content contributors and consumers. If you find someone violating the ''terms of use'', let us know and we'll let the community know that they are not playing fair and are not endorsed by our effort. We believe this approach will be less costly than legal action and, at the same time, more effective at discouraging unfair use. ''More <ins class="diffchange diffchange-inline">details </ins>below...''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* '''Trademark''' - this is the really clever bit. We can use the trademark of ''WikiPathways'' as badge of fair use. Anyone using or redistributing WikiPathways content under the terms of our ''license'' and ''terms of use'' can proudly display the WikiPathways trademark as evidence of being a trusted member of the community participating in our effort. If you are in violation of either our ''license'' or ''terms of use'' we can legally enforce the removal of our ''trademark'' and you will no longer be identified as a trusted member. We will actively discourage patronage of resources that can not be trusted. '''''This community is not so big... so you had better play fair!''''' ''More <del class="diffchange diffchange-inline">detail </del>below...''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* '''Trademark''' - this is the really clever bit. We can use the trademark of ''WikiPathways'' as badge of fair use. Anyone using or redistributing WikiPathways content under the terms of our ''license'' and ''terms of use'' can proudly display the WikiPathways trademark as evidence of being a trusted member of the community participating in our effort. If you are in violation of either our ''license'' or ''terms of use'' we can legally enforce the removal of our ''trademark'' and you will no longer be identified as a trusted member. We will actively discourage patronage of resources that can not be trusted. '''''This community is not so big... so you had better play fair!''''' ''More <ins class="diffchange diffchange-inline">details </ins>below...''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== The License ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== The License ==</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19069&oldid=prevAlexanderPico at 16:17, 16 September 20082008-09-16T16:17:52Z<p></p>
<table style="background-color: white; color:black;">
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 16:17, 16 September 2008</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Overview ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Overview ==</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>If you are like <del class="diffchange diffchange-inline">me</del>, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At the same time, we recognize that they are important issues, especially when it comes to promoting and protecting data sharing in scientific domains. So, we have done our homework here at WikiPathways and have settled on an approach developed by [http://sciencecommons.org Science Commons]. We are going to do our best to explain the strategy in clear terms. Please feel free to give us feedback on these issues and voice your opinions and questions on the [http://groups.google.com/group/wikipathways-discuss WikiPathways discussion mailing list].</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>If you are like <ins class="diffchange diffchange-inline">us</ins>, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At the same time, we recognize that they are important issues, especially when it comes to promoting and protecting data sharing in scientific domains. So, we have done our homework here at WikiPathways and have settled on an approach developed by [http://sciencecommons.org Science Commons]. We are going to do our best to explain the strategy in clear terms. Please feel free to give us feedback on these issues and voice your opinions and questions on the [http://groups.google.com/group/wikipathways-discuss WikiPathways discussion mailing list].</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Our strategy has three main components:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Our strategy has three main components:</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Contributing ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Contributing ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>When editing an existing pathway or creating a new pathway, your contributions to WikiPathways content should reflect your best understanding of the biology you are representing. Whenever possible, contributions should be referenced by published, peer-reviewed literature. You can <del class="diffchange diffchange-inline">reproduce </del>content from the following resources with appropriate attribution:</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>When editing an existing pathway or creating a new pathway, your contributions to WikiPathways content should reflect your best understanding of the biology you are representing. Whenever possible, contributions should be referenced by published, peer-reviewed literature. You can <ins class="diffchange diffchange-inline">transcribe </ins>content from the following resources with appropriate attribution:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* text books</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* text books</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* research articles and reviews</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* research articles and reviews</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* public databases and pathway resources: KEGG<del class="diffchange diffchange-inline">, </del>Reactome<del class="diffchange diffchange-inline">, BioCarta</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* public databases and pathway resources: KEGG <ins class="diffchange diffchange-inline">and </ins>Reactome</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* trusted online resources, including wikipedia</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* trusted online resources, including wikipedia</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* your own research and hypotheses (reasonably tested)</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* your own research and hypotheses (reasonably tested)</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Redistributing ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Redistributing ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content, e.g., as art, on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. <del class="diffchange diffchange-inline">I </del>think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content, e.g., as art, on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. <ins class="diffchange diffchange-inline">We </ins>think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Adapting, Dissecting, Augmenting ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Adapting, Dissecting, Augmenting ===</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19031&oldid=prevAlexanderPico: /* Definitions */2008-09-16T00:18:58Z<p><span class="autocomment">Definitions</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Definitions ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Definitions ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>; Content : The pathway information (in part or in whole) represented in data and image formats.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>; Content : The pathway information (in part or in whole) represented in data and image formats <ins class="diffchange diffchange-inline">at WikiPathways</ins>.</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19030&oldid=prevAlexanderPico: /* Attribution */2008-09-16T00:18:27Z<p><span class="autocomment">Attribution</span></p>
<table style="background-color: white; color:black;">
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* Feel free to use our trademark (our logo) to indicate your participation in our community with using, referencing or redistributing WikiPathways content. ''See trademark terms below''</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* Feel free to use our trademark (our logo) to indicate your participation in our community with using, referencing or redistributing WikiPathways content. ''See trademark terms below''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* Attribution to individual contributors is not necessary. WikiPathways will track and display contributions from individual authors and curators to each pathway on <del class="diffchange diffchange-inline">its dedicated </del>page<del class="diffchange diffchange-inline">, so </del>as long as hyperlinks are provided to WikiPathways, the evolving list of contributors will be indirectly referenced.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* Attribution to individual contributors is not necessary. WikiPathways will track and display contributions from individual authors and curators to each pathway on <ins class="diffchange diffchange-inline">each pathway </ins>page<ins class="diffchange diffchange-inline">. So </ins>as long as hyperlinks are provided to WikiPathways, the evolving list of contributors will be indirectly referenced.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Trademark ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Trademark ==</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19029&oldid=prevAlexanderPico: /* Attribution */2008-09-16T00:17:48Z<p><span class="autocomment">Attribution</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* When using or referencing WikiPathways or WikiPathways content in an article, <del class="diffchange diffchange-inline">please </del>cite our latest publication:</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* When using or referencing WikiPathways or WikiPathways content in an article, <ins class="diffchange diffchange-inline">you should </ins>cite our latest publication:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Pico, A. R., Kelder, T., van Iersel, M. P., Hanspers, K., Conklin, B. R., and Evelo, C. (2008). Wikipathways: Pathway editing for the people. PLoS Biology, 6(7):e184+. [http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Pico, A. R., Kelder, T., van Iersel, M. P., Hanspers, K., Conklin, B. R., and Evelo, C. (2008). Wikipathways: Pathway editing for the people. PLoS Biology, 6(7):e184+. [http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* When using, referencing or redistributing content, <del class="diffchange diffchange-inline">we recommend that </del>you provide a hyperlink or printed URL to the main page:</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* When using, referencing or redistributing content, you <ins class="diffchange diffchange-inline">should </ins>provide a hyperlink or printed URL to the main page:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.wikipathways.org http://www.wikipathways.org]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.wikipathways.org http://www.wikipathways.org]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>* When using, referencing or redistributing an individual pathway in an online medium, <del class="diffchange diffchange-inline">we recommend that </del>you provide a hyperlink directly to the pathway, like so:</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>* When using, referencing or redistributing an individual pathway in an online medium, you <ins class="diffchange diffchange-inline">should </ins>provide a hyperlink directly to the pathway, like so:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19028&oldid=prevAlexanderPico: /* Attribution */2008-09-16T00:16:51Z<p><span class="autocomment">Attribution</span></p>
<table style="background-color: white; color:black;">
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<td colspan='2' style="background-color: white; color:black;">Revision as of 00:16, 16 September 2008</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* When using or referencing WikiPathways or WikiPathways content in an article, please cite our latest publication:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* When using or referencing WikiPathways or WikiPathways content in an article, please cite our latest publication:</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">Alexander R </del>Pico, <del class="diffchange diffchange-inline">Thomas </del>Kelder, <del class="diffchange diffchange-inline">Martijn P </del>van Iersel, <del class="diffchange diffchange-inline">Kristina </del>Hanspers, <del class="diffchange diffchange-inline">Bruce R </del>Conklin, <del class="diffchange diffchange-inline">Chris </del>Evelo <del class="diffchange diffchange-inline"> </del>(2008) <del class="diffchange diffchange-inline"> WikiPathways</del>: <del class="diffchange diffchange-inline">pathway </del>editing for the people. <del class="diffchange diffchange-inline"> </del>PLoS <del class="diffchange diffchange-inline">Biol </del>6<del class="diffchange diffchange-inline">: </del>7. <del class="diffchange diffchange-inline"> Jul </del>[http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Pico, <ins class="diffchange diffchange-inline">A. R., </ins>Kelder, <ins class="diffchange diffchange-inline">T., </ins>van Iersel, <ins class="diffchange diffchange-inline">M. P., </ins>Hanspers, <ins class="diffchange diffchange-inline">K., </ins>Conklin, <ins class="diffchange diffchange-inline">B. R., and </ins>Evelo<ins class="diffchange diffchange-inline">, C. </ins>(2008)<ins class="diffchange diffchange-inline">. Wikipathways</ins>: <ins class="diffchange diffchange-inline">Pathway </ins>editing for the people. PLoS <ins class="diffchange diffchange-inline">Biology, </ins>6<ins class="diffchange diffchange-inline">(</ins>7<ins class="diffchange diffchange-inline">):e184+</ins>. [http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* When using, referencing or redistributing content, we recommend that you provide a hyperlink or printed URL to the main page:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>* When using, referencing or redistributing content, we recommend that you provide a hyperlink or printed URL to the main page:</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19027&oldid=prevAlexanderPico at 00:14, 16 September 20082008-09-16T00:14:52Z<p></p>
<table style="background-color: white; color:black;">
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<col class='diff-marker' />
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 00:14, 16 September 2008</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Redistributing ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Redistributing ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. I think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content<ins class="diffchange diffchange-inline">, e.g., as art, </ins>on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. I think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Adapting, Dissecting, Augmenting ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Adapting, Dissecting, Augmenting ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div> </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">You are free to download, use and redistribute any part of a given pathway at WikiPathways according to the ''terms of use''. You are free to augment, extend and build upon the content outside of WikiPathways and then use or redistribute according to the ''terms of use''. You are free to edit, subtract from and change the content outside of WikiPathways and then use or redistribute according to the ''terms of use''. Of course, it is always better to make edits to the content within WikiPathways to grow the content and share alike, but this is not strictly required. If there is a feature or function you require in order to perform an edit to the content, do not hesitate to [mailto:wikipathways-discuss@googlegroups.com contact us] and participate in the design and implementation of the new feature yourself. This is an open source project, after all!</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Attribution ===</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">* When using or referencing WikiPathways or WikiPathways content in an article, please cite our latest publication:</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">Alexander R Pico, Thomas Kelder, Martijn P van Iersel, Kristina Hanspers, Bruce R Conklin, Chris Evelo (2008) WikiPathways: pathway editing for the people. PLoS Biol 6: 7. Jul [http://www.ncbi.nlm.nih.gov/pubmed/18651794?dopt=AbstractPlus PMID:18651794]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">* When using, referencing or redistributing content, we recommend that you provide a hyperlink or printed URL to the main page:</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[http://www.wikipathways.org http://www.wikipathways.org]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">* When using, referencing or redistributing an individual pathway in an online medium, we recommend that you provide a hyperlink directly to the pathway, like so:</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis http://www.wikipathways.org/index.php/Pathway:Homo_sapiens:Apoptosis]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">* Feel free to use our trademark (our logo) to indicate your participation in our community with using, referencing or redistributing WikiPathways content. ''See trademark terms below''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">* Attribution to individual contributors is not necessary. WikiPathways will track and display contributions from individual authors and curators to each pathway on its dedicated page, so as long as hyperlinks are provided to WikiPathways, the evolving list of contributors will be indirectly referenced.</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Trademark ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Trademark ==</div></td></tr>
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</table>AlexanderPicohttps://classic.wikipathways.org/index.php?title=WikiPathways:General_disclaimer&diff=19026&oldid=prevAlexanderPico: New page: === This page is under construction === == Overview == If you are like me, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At...2008-09-15T23:49:31Z<p>New page: === This page is under construction === == Overview == If you are like me, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At...</p>
<p><b>New page</b></p><div>=== This page is under construction ===<br />
<br />
== Overview ==<br />
If you are like me, issues about licensing, copyrights and trademarks are boring at best and quickly become frustratingly opaque. At the same time, we recognize that they are important issues, especially when it comes to promoting and protecting data sharing in scientific domains. So, we have done our homework here at WikiPathways and have settled on an approach developed by [http://sciencecommons.org Science Commons]. We are going to do our best to explain the strategy in clear terms. Please feel free to give us feedback on these issues and voice your opinions and questions on the [http://groups.google.com/group/wikipathways-discuss WikiPathways discussion mailing list].<br />
<br />
Our strategy has three main components:<br />
* '''The License''' - this is the legal code applicable to the ''content'' at WikiPathways. We are using the very permissive [http://creativecommons.org/licenses/by/3.0/legalcode CC-BY] license with ''terms of use'' specified in clear English. ''More detail below...''<br />
<br />
* '''Terms of Use''' - this is where we define our own terms for how we expect WikiPathways content to be used. This is not a legally-binding code, but rather an explicit declaration of expectation that is enforceable by the entire community of content contributors and consumers. If you find someone violating the ''terms of use'', let us know and we'll let the community know that they are not playing fair and are not endorsed by our effort. We believe this approach will be less costly than legal action and, at the same time, more effective at discouraging unfair use. ''More detail below...''<br />
<br />
* '''Trademark''' - this is the really clever bit. We can use the trademark of ''WikiPathways'' as badge of fair use. Anyone using or redistributing WikiPathways content under the terms of our ''license'' and ''terms of use'' can proudly display the WikiPathways trademark as evidence of being a trusted member of the community participating in our effort. If you are in violation of either our ''license'' or ''terms of use'' we can legally enforce the removal of our ''trademark'' and you will no longer be identified as a trusted member. We will actively discourage patronage of resources that can not be trusted. '''''This community is not so big... so you had better play fair!''''' ''More detail below...''<br />
<br />
== The License ==<br />
WikiPathways content is covered by the [http://creativecommons.org/licenses/by/3.0/ Creative Commons Attribution 3.0 Unported license], which states that you are free to share (copy, distribute and transmit) and remix (adapt) the work as long as you attribute the work in the manner specified in our ''terms of use''. For any reuse or distribution, you must make clear to others the license terms of the work. The best way to do this is with a link to [http://creativecommons.org/licenses/by/3.0/ this web page]. Again, this license if fairly permissive, so you shouldn't feel paralyzed by legalese if you are interested in using or redistributing WikiPathways content. Just be sure to read the ''terms of use'' and if you have any questions about fair use, don't hesitate to [mailto:wikipathways-discuss@googlegroups.com contact us].<br />
<br />
== Terms of Use ==<br />
A common sense explanation of how we expect WikiPathways content to be used.<br />
<br />
=== Contributing ===<br />
When editing an existing pathway or creating a new pathway, your contributions to WikiPathways content should reflect your best understanding of the biology you are representing. Whenever possible, contributions should be referenced by published, peer-reviewed literature. You can reproduce content from the following resources with appropriate attribution:<br />
* text books<br />
* research articles and reviews<br />
* public databases and pathway resources: KEGG, Reactome, BioCarta<br />
* trusted online resources, including wikipedia<br />
* your own research and hypotheses (reasonably tested)<br />
<br />
You should ''not'' make contributions based on work presented by other researchers yet to be published or based on proprietary sources (purchased databases, company secrets, etc).<br />
<br />
=== Downloading ===<br />
You can download WikiPathways content in any of the available data and image formats we provide, including but not limited to: gpml, mapp, text, eu.gene, html, png, svg, jpeg. But you must cite or give appropriate attribution. ''See Attribution below''<br />
<br />
=== Using ===<br />
You are free to use the pathway images in presentations, documents, websites and publications. You are free to use the pathway data in analyses, qualitative or quantitative. But you must cite or give appropriate attribution. ''See Attribution below''<br />
<br />
=== Redistributing ===<br />
You are free to redistribute WikiPathways content on your website, as part of your own resource, with your own software application. You are free to charge for services associated with WikiPathways content, but you are ''not'' allowed to charge for the content it self. This does not prevent you from redistributing the content on a CD along with software that you are charging for as long as it is made clear that the content is free and freely available from WikiPathways.org. This does not prevent you from charging for services including additional curation, modification or analysis of the content as long as it is made clear that the content is free and freely available from WikiPathways.org. You may even sell modified versions of the images of the pathway content on your website as long as it is made clear that the content is free and freely available from WikiPathways.org. I think you get the idea: do not charge for the content as provided by WikiPathways and if you do associate the content with something are are selling, make it clear that the content is free and freely available from WikiPathways.org. ''See Attribution below''<br />
<br />
=== Adapting, Dissecting, Augmenting ===<br />
<br />
<br />
=== Attribution ===<br />
<br />
== Trademark ==<br />
The WikiPathways trademark (our logo) can be reproduced with any use and redistribution of WikiPathways content. You do not necessarily have to ask permission before using the logo, if you are confident that you satisfy the license and ''terms of use''. However, we always appreciate hearing about related efforts, so please drop us a line. We will have a wiki page dedicated to listing such efforts.<br />
<br />
If you do not satisfy the license or ''terms of use'' our first measure will be to contact you and request that you change your behavior. Failing that, we will require that you remove the WikiPathways trademark from your site or resource. We will also have a wiki page dedicated to listing these efforts as well :)<br />
<br />
<br />
----<br />
=== References ===<br />
* [http://sciencecommons.org/wp-content/uploads/freedom-to-research.pdf Freedom to Research] - a clear explanation of the motivation behind the Science Commons Protocols for Implementing Open Access Data.<br />
* [http://sciencecommons.org/projects/publishing/open-access-data-protocol/ Open Access Data Protocol] - a protocol for implementing Open Access Data by Science Commons.<br />
<br />
=== Definitions ===<br />
; Content : The pathway information (in part or in whole) represented in data and image formats.</div>AlexanderPico