Glucosinolate biosynthesis (from aromatic amino acid) (Arabidopsis thaliana)
From WikiPathways
Description
This pathway describes the glucosinolate derived from aromatic amino acid (Phe, Tyr, Trp) in Arabidopsis thaliana. This is based on the KEGG pathway and PlantCyc.
Some pathway entities are unknown and being investigated, these are denoted as "Catalyst" and "Metabolite" for now.
Quality Tags
Ontology Terms
Bibliography
- Grubb CD, Zipp BJ, Ludwig-Mテシller J, Masuno MN, Molinski TF, Abel S; ''Arabidopsis glucosyltransferase UGT74B1 functions in glucosinolate biosynthesis and auxin homeostasis.''; Plant J, 2004 PubMed Europe PMC Scholia
- Klein M, Papenbrock J; ''Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana.''; Physiol Plant, 2009 PubMed Europe PMC Scholia
- Wittstock U, Burow M; ''Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological significance.''; Arabidopsis Book, 2010 PubMed Europe PMC Scholia
- Klein M, Reichelt M, Gershenzon J, Papenbrock J; ''The three desulfoglucosinolate sulfotransferase proteins in Arabidopsis have different substrate specificities and are differentially expressed.''; FEBS J, 2006 PubMed Europe PMC Scholia
History
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External references
DataNodes
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Name | Type | Database reference | Comment |
---|---|---|---|
(E)-4-Hydroxyphenylacetaldehyde oxime | Metabolite | C04350 (KEGG Compound) ![]() | |
(E)-Phenylacetaldoxime | Metabolite | C19714 (KEGG Compound) ![]() | |
1-Hydroxy-3-indolylmethylglucosinolate | Metabolite | 123131529 (PubChem-compound) ![]() | |
1-Methoxy-3-indolylmethylglucosinolate | Metabolite | C00000126 (KNApSAcK) ![]() | |
2-Phenylethyl glucosinolate | Metabolite | C08417 (KEGG Compound) ![]() | |
3-Phenylpropionaldoxim | Metabolite | C17236 (KEGG Compound) ![]() | |
3-indolylmethyl glucosinolate | Metabolite | C00000125 (KNApSAcK) ![]() | |
4-Hydroxy-3-indolylmethylglucosinolate | Metabolite | C00000127 (KNApSAcK) ![]() | |
4-Methoxy-3-indolylmethylglucosinolate | Metabolite | C00000128 (KNApSAcK) ![]() | |
Benzyl glucosinolate | Metabolite | CHEBI:17127 (ChEBI) ![]() | |
CYP79A1 | GeneProduct | K13027 (KEGG Genes) ![]() | |
CYP79A2 | GeneProduct | AT5G05260 (TAIR) ![]() | |
CYP79B2 | GeneProduct | AT4G39950 (TAIR) ![]() | |
CYP79B3 | GeneProduct | AT2G22330 (TAIR) ![]() | |
CYP81F1 | GeneProduct | AT4G37430 (TAIR) ![]() | |
CYP81F2 | GeneProduct | AT5G57220 (TAIR) ![]() | |
CYP81F3 | GeneProduct | AT4G37400 (TAIR) ![]() | |
CYP81F4 | GeneProduct | AT4G37410 (TAIR) ![]() | |
CYP83B1 | GeneProduct | AT4G31500 (TAIR) ![]() | |
Catalyst | GeneProduct | ||
Desulfoglucotropeolin | Metabolite | C01069 (KEGG Compound) ![]() | |
Indole-3-acetaldehyde oxime | Metabolite | C02937 (KEGG Compound) ![]() | |
Indolylmethyl-desulfoglucosinolate | Metabolite | C16517 (KEGG Compound) ![]() | |
Indolylmethylthiohydroximate | Metabolite | C16516 (KEGG Compound) ![]() | |
L-Homophenylalanine | Metabolite | C17235 (KEGG Compound) ![]() | |
L-Phenylalanine | Metabolite | C00079 (KEGG Compound) ![]() | |
L-Tryptophan | Metabolite | C00078 (KEGG Compound) ![]() | |
L-Tyrosine | Metabolite | C00082 (KEGG Compound) ![]() | |
Metabolite | Metabolite | ||
O-methyltransferase | GeneProduct | IGMT5 (TAIR) ![]() | |
Phenylacetothiohydroximate | Metabolite | C03719 (KEGG Compound) ![]() | |
S-(Hydroxyphenylacetothiohydroximoyl)-L-cysteine | Metabolite | C17238 (KEGG Compound) ![]() | |
S-(Indolylmethylthiohydroximoyl)-L-cysteine | Metabolite | C16518 (KEGG Compound) ![]() | |
S-(Phenylacetothiohydroximoyl)-L-cysteine | Metabolite | C17237 (KEGG Compound) ![]() | |
SOT16 | GeneProduct | AT1G74100 (TAIR) ![]() | |
SUR1 | GeneProduct | AT2G20610 (Gramene Arabidopsis) ![]() | |
SUR1 | GeneProduct | AT2G20610 (TAIR) ![]() | |
UGT74B1 | GeneProduct | AT1G24100 (TAIR) ![]() | |
indole glucosinolate methyltransferase | GeneProduct | IGMT1 (TAIR) ![]() | |
p-Hydroxybenzyl glucosinolate | Metabolite | C08426 (KEGG Compound) ![]() | |
p-Hydroxybenzyldesulphoglucosinolate | Metabolite | C17240 (KEGG Compound) ![]() | |
p-Hydroxyphenylacetothiohydroximate | Metabolite | C17239 (KEGG Compound) ![]() |
Annotated Interactions
No annotated interactions