WikiPathways

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
(Oct data release)
(387 intermediate revisions not shown.)
Line 1: Line 1:
-
__NOEDITSECTION__ <!-- Turn off section editing -->
 
-
__NOTOC__ <!-- Turn off Table of Contents  -->
 
-
 
{|  
{|  
<!-- Special Notice Section-->
<!-- Special Notice Section-->
-
<!-- TECHNICAL DIFFICULTIES -->
 
-
<!--|-valign="top"
 
-
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
 
-
<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
 
-
<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>-->
 
-
<!-- SURVEY -->
 
<!--
<!--
|-valign="top"
|-valign="top"
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel yellowFg">We want your feedback! A quick survey to help us focus development and renew funding.  [https://www.surveymonkey.com/r/wikipathways https://www.surveymonkey.com/r/wikipathways]</h2></div>  
+
<h2 class="frontPagePanel yellowFg">11 April 2019: Scheduled Downtime</h2>
 +
<font size=2>'''We will be taking the site down for an hour at 24:00UTC on April 11th. We are switching over to new and improved infrastructure! Sorry for any inconveniences.'''</font></div>
-->
-->
-
<!-- CC0 ANNOUNCEMENT -->
+
 
 +
<!-- TECHNICAL DIFFICULTIES -->
 +
<!--
|-valign="top"
|-valign="top"
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel yellowFg">We made the switch to CC0 for the most unrestricted access possible. [[WikiPathways:CC0_Announcement|Read all about it...]]</h2></div>  
+
<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
-
<!-- PAGE CONTENT -->
+
<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>
 +
-->
 +
 
 +
<!-- ANNOUNCEMENTS -->
 +
<!--
 +
|-valign="top" align="center"
 +
|colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
 +
<h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2>
 +
<font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div>  
 +
-->
 +
 
 +
<!-- Page Content -->
|-valign="top"
|-valign="top"
|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
-
<h2 class="frontPagePanel greenFg">Welcome to WikiPathways <sup>BETA</sup></h2>
+
<h2 class="frontPagePanel greenFg">Try the New WikiPathways</h2>
-
<font size=2>'''WikiPathways is a database of biological pathways maintained by and for the scientific community.'''</font></div>
+
<font size=2>'''Visit https://wikipathways.org to see the new version of WikiPathways.''' This is the "classic" version of WikiPathways will not be maintained for much longer.
 +
</font></div>
<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
Line 63: Line 69:
{|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
{|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
|-
|-
-
|rowspan="1" align="center" style="width:4%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|rowspan="1" align="center" valign="top" style="width:45%;"|<big>'''Sandbox'''</big>{{#imgLink:Sandbox_thumb_200.jpg|200|center||pathway|WP4|Sandbox}}
+
|align="center" valign="top"|<big>'''Learn'''</big>{{#imgLink:AcademyPath.png|200|center||external|http://academy.wikipathways.org|WikiPathways Academy}}
'''Play with the editor tools'''
'''Play with the editor tools'''
-
|rowspan="1" align="center" style="width:4%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|rowspan="1" align="center" style="width:1%;"|
+
|rowspan="1" align="center" style="width:25%;"|
-
|align="left" valign="top" style="width:45%;"|
+
|align="center" valign="top"|<big>'''Request'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://github.com/wikipathways/pathway-curation-tasks/issues|Figure Conversion}}
-
'''Check out the following pages:'''<br>
+
'''Queue figures for conversion'''
-
* [[Help:Overview | Overview]]
+
|rowspan="1" align="center" style="width:25%;"|
-
* [[Special:RecentPathwayChanges | Recent changes]]
+
|-
-
* [[Special:NewPathwaysPage | New pathways]]
+
|colspan="7"|
-
* [[Special:SpecialWishList | Pathway wish list]]
+
|}
-
* [http://wikipathways.tumblr.com/ WikiPathways Blog].
+
 
-
'''For more information see our [[Help:Contents |Help topics]]'''
+
<!-- SURVEY -->
-
|rowspan="1" align="center" style="width:1%;"|
+
{|style="width:100%;margin-top:3em;" border="0" cellspacing="2" cellpadding="1" align="center"
 +
|-
 +
|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
 +
<h2 class="frontPagePanel yellowFg">We want your feedback! A quick survey to help us focus development: [https://www.surveymonkey.com/r/wikipathways https://www.surveymonkey.com/r/wikipathways]</h2></div>
|-
|-
|colspan="7"|
|colspan="7"|
Line 86: Line 95:
| valign="top"|
| valign="top"|
<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
-
<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}}
+
<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}}
-
<h2 class="frontPagePanel blueFg">Updates</h2>
+
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
-
* '''June 2017 Release''': 124 edits by 21 contributors, and 6 new pathways this month
+
* '''October 2024 Release''': [[Special:RecentPathwayChanges|167 edits]] by [[WikiPathways:Statistics#Contribution_scores|4 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-
* '''April 2017 Release''': 80 edits by 8 contributors this month
+
* '''September 2024 Release''': [[Special:RecentPathwayChanges|179 edits]] by [[WikiPathways:Statistics#Contribution_scores|6 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways].
-
* '''March 2017 Release''': 54 edits by 10 contributors this month
+
* '''August 2024 Release''': [[Special:RecentPathwayChanges|1,114 edits]] by [[WikiPathways:Statistics#Contribution_scores|4 contributors]] and [https://www.wikipathways.org/browse/new.html 1 new pathway].
-
* '''February 2017 Release''': 56 edits by 8 contributors this month
+
* '''July 2024 Release''': [[Special:RecentPathwayChanges|53 edits]] by [[WikiPathways:Statistics#Contribution_scores|8 contributors]] and [https://www.wikipathways.org/browse/new.html 3 new pathways].
-
* February 2: Rett syndrome pathway is now live at [https://en.wikipedia.org/wiki/Rett_syndrome#Interactive_pathway_map Wikipedia]
+
* '''June 2024 Release''': [[Special:RecentPathwayChanges|345 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways].
-
* '''January 2017 Release''': 25 new human pathways with 181 new genes
+
* '''May 2024 Release''': [[Special:RecentPathwayChanges|110 edits]] by [[WikiPathways:Statistics#Contribution_scores|10 contributors]] and [https://www.wikipathways.org/browse/new.html 6 new pathways].
-
* December 22: Blog post about our [http://wikipathways.tumblr.com/post/154795992917/new-pathways-a-set-of-23-new-pathways-with-175 translation of mouse pathways]
+
* '''April 2024 Release''': [[Special:RecentPathwayChanges|290 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-
* '''December 2016 Release''': 201 edits by 15 contributors this month
+
* '''March 2024 Release''': [[Special:RecentPathwayChanges|542 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 10 new pathways].
-
* November 11: [http://wikipathways.tumblr.com/post/153059615192/single-cell-analyses-of-x-chromosome-inactivation Enrichment analysis of single-cell dataset on differentiation]
+
* '''February 2024 Release''': [[Special:RecentPathwayChanges|586 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [https://www.wikipathways.org/browse/new.html 16 new pathways].
-
* '''November 2016 Release''': 143 new human genes added to pathways
+
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
-
* '''October 2016 Release''': 12 new human pathways contributed
+
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
-
* Sept 30: [http://wikipathways.tumblr.com/post/151159398097/new-pathways-the-second-batch-of-pathways-from-a New pathways featured in blog post]
+
<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=2</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
-
* '''September 2016 Release''': 42 new human genes added
+
-
* '''August 2016 Release''': 60 genes and 10 new human pathways added
+
-
* Want to add your ORCID id to your WikiPathways account? [http://wikipathways.org/index.php/Template:User_ORCID Learn how]
+
-
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='3'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
+
-
<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=3</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
+
-
<h2 class="frontPagePanel blueFg">Curator of the week</h2><rss>https://wikipathways.github.io/academy/curators/curators_list.xml|max=1</rss>
+
</div>
</div>
|}
|}
 +
 +
__NOEDITSECTION__ <!-- Turn off section editing -->
 +
__NOTOC__ <!-- Turn off Table of Contents  -->

Revision as of 20:08, 15 October 2024

Try the New WikiPathways

Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will not be maintained for much longer.

Find Pathways

Search

Browse

Browse by species and category

You can search by:
  • Pathway name (Apoptosis)
  • Gene or protein name (p53)
  • Any page content (cancer)

Get Pathways

Download

Multiple formats and methods

Growth

New pathways added each month

Edit Pathways

Learn

Play with the editor tools

Request

Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways


Today's Featured Pathway

Host-pathogen interaction of human coronaviruses - interferon induction (Homo sapiens)

Image does not exist
Host-pathogen interaction of human coronaviruses - interferon induction

Updates

    more...

Discussions

No recent changes    more...

Forum

        Google group wikipathways-discuss


    Personal tools