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| <h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}} | | <h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}} |
| <h2 class="frontPagePanel blueFg">Updates</h2> | | <h2 class="frontPagePanel blueFg">Updates</h2> |
- | * '''February 2017 Update''': 56 edits by 8 contributors this month | + | * '''February 2017 Release''': 56 edits by 8 contributors this month |
| * February 2: Rett syndrome pathway is now live at [https://en.wikipedia.org/wiki/Rett_syndrome#Interactive_pathway_map Wikipedia] | | * February 2: Rett syndrome pathway is now live at [https://en.wikipedia.org/wiki/Rett_syndrome#Interactive_pathway_map Wikipedia] |
- | * '''January 2017 Update''': 25 new human pathways with 181 new genes | + | * '''January 2017 Release''': 25 new human pathways with 181 new genes |
| * December 22: Blog post about our [http://wikipathways.tumblr.com/post/154795992917/new-pathways-a-set-of-23-new-pathways-with-175 translation of mouse pathways] | | * December 22: Blog post about our [http://wikipathways.tumblr.com/post/154795992917/new-pathways-a-set-of-23-new-pathways-with-175 translation of mouse pathways] |
- | * '''December 2016 Update''': 201 edits by 15 contributors this month | + | * '''December 2016 Release''': 201 edits by 15 contributors this month |
| * November 11: [http://wikipathways.tumblr.com/post/153059615192/single-cell-analyses-of-x-chromosome-inactivation Enrichment analysis of single-cell dataset on differentiation] | | * November 11: [http://wikipathways.tumblr.com/post/153059615192/single-cell-analyses-of-x-chromosome-inactivation Enrichment analysis of single-cell dataset on differentiation] |
- | * '''November 2016 Update''': 143 new human genes added to pathways | + | * '''November 2016 Release''': 143 new human genes added to pathways |
- | * '''October 2016 Update''': 12 new human pathways contributed | + | * '''October 2016 Release''': 12 new human pathways contributed |
| * Sept 30: [http://wikipathways.tumblr.com/post/151159398097/new-pathways-the-second-batch-of-pathways-from-a New pathways featured in blog post] | | * Sept 30: [http://wikipathways.tumblr.com/post/151159398097/new-pathways-the-second-batch-of-pathways-from-a New pathways featured in blog post] |
- | * '''September 2016 Update''': 42 new human genes added | + | * '''September 2016 Release''': 42 new human genes added |
- | * '''August 2016 Update''': 60 genes and 10 new human pathways added | + | * '''August 2016 Release''': 60 genes and 10 new human pathways added |
| * Want to add your ORCID id to your WikiPathways account? [http://wikipathways.org/index.php/Template:User_ORCID Learn how] | | * Want to add your ORCID id to your WikiPathways account? [http://wikipathways.org/index.php/Template:User_ORCID Learn how] |
| <h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='3'></recentChanges> [[WikiPathways:Discussions|more...]] | | <h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='3'></recentChanges> [[WikiPathways:Discussions|more...]] |
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Welcome to WikiPathways BETA
WikiPathways is a database of biological pathways maintained by and for the scientific community.
Find Pathways
| Search
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| Browse
Browse by species and category
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You can search by:
- Pathway name (Apoptosis)
- Gene or protein name (p53)
- Any page content (cancer)
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Get Pathways
| Download
Multiple formats and methods
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| Growth
New pathways added each month
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Edit Pathways
| Sandbox
Play with the editor tools
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Check out the following pages:
For more information see our Help topics
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Today's Featured Pathway
Glycosylation and related congenital defects (Homo sapiens) invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/b/b8/WP4521_91371.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/b/b8/WP4521_91371.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'Glycosylation a...', 'https://classic...', 'Glycosylation a...', 'center', 'pwthumb', '300')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4521', '300', 'center', 'Glycosylation a...', 'pathway', 'Glycosylation a...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2986): PPFrame_DOM->expand(Object(PPNode_DOM))
- 9 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 10 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 11 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{{Template:Toda...')
- 12 /var/www/wikipathways/includes/parser/Parser.php(439): Parser->internalParse('{{Template:Toda...')
- 13 /var/www/wikipathways/wpi/extensions/PathwayOfTheDay/PathwayOfTheDay.php(60): Parser->recursiveTagParse('{{Template:Toda...')
- 14 [internal function]: getPathwayOfTheDay(Object(Parser), 'Sunday 9 June 2...', 'Curation:Featur...', 'true')
- 15 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('getPathwayOfThe...', Array)
- 16 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 17 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 18 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('__NOEDITSECTION...')
- 19 /var/www/wikipathways/includes/parser/Parser.php(321): Parser->internalParse('__NOEDITSECTION...')
- 20 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('__NOEDITSECTION...', Object(Title), Object(ParserOptions), true, true, 91372)
- 21 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('__NOEDITSECTION...', Object(Title), true, true)
- 22 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('__NOEDITSECTION...', Object(Title), true)
- 23 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('__NOEDITSECTION...')
- 24 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
- 25 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 26 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 27 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 28 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 29 {main}
Updates
- February 2017 Release: 56 edits by 8 contributors this month
- February 2: Rett syndrome pathway is now live at Wikipedia
- January 2017 Release: 25 new human pathways with 181 new genes
- December 22: Blog post about our translation of mouse pathways
- December 2016 Release: 201 edits by 15 contributors this month
- November 11: Enrichment analysis of single-cell dataset on differentiation
- November 2016 Release: 143 new human genes added to pathways
- October 2016 Release: 12 new human pathways contributed
- Sept 30: New pathways featured in blog post
- September 2016 Release: 42 new human genes added
- August 2016 Release: 60 genes and 10 new human pathways added
- Want to add your ORCID id to your WikiPathways account? Learn how
Discussions more...
Forum Google group wikipathways-discuss
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