Download Pathways

From WikiPathways

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Click on one of the links below to download all pathways in the Portable Network Graphics (png) format.
Click on one of the links below to download all pathways in the Portable Network Graphics (png) format.
<batchDownload filetype="png"></batchDownload>
<batchDownload filetype="png"></batchDownload>
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== Flatfile ==
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Click on one of the links below to download all pathways in either a tab-delimited or HTML table format. The output only includes gene content encoded by Entrez Gene identifiers.
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* '''All species''' ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?output=html html])
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* Homo sapiens ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Homo%20sapiens&output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Homo%20sapiens&output=html html])
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* Mus Musculus ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Mus%20musculus tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Mus%20musculus&output=html html])
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* Rattus norvegicus ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Rattus%20norvegicus&output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Rattus%20norvegicus&output=html html])
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* Drosophila melanogaster ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Drosophila%20melanogaster&output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Drosophila%20melanogaster&output=html html])
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* Caenorhabditis elegans ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Caenorhabditis%20elegans&output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Caenorhabditis%20elegans&output=html html])
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* Saccharomyces cerevisiae ([http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Saccharomyces%20cerevisiae&output=tab tab], [http://www.wikipathways.org/wpi/pathway_content_flatfile.php?species=Saccharomyces%20cerevisiae&output=html html])

Revision as of 20:35, 20 February 2008


GPML

Click on one of the links below to download all pathways in GPML format. You can view and edit GPML files in PathVisio. From PathVisio you can also export these files to the [www.genmapp.org GenMAPP] mapp format and PDF.

Eu.Gene

Click on one of the links below to download all pathways in the Eu.Gene format (pwf). Eu.Gene is a tool for microarray analysis in context of biological pathways (read more).

Plain text

Click on one of the links below to download all pathways in plain text format. This format contains a list of all datanodes, with the identifier in the first column, and the database system in the second column.

PDF

Click on one of the links below to download all pathways in Portable Document Format (PDF).

SVG

Click on one of the links below to download all pathways in SVG format. The SVG files can be used to create high quality images for publication purposes. You can edit and convert the SVG files using Inkscape.

PNG

Click on one of the links below to download all pathways in the Portable Network Graphics (png) format.

Flatfile

Click on one of the links below to download all pathways in either a tab-delimited or HTML table format. The output only includes gene content encoded by Entrez Gene identifiers.

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