Help:Viewing Pathways
From WikiPathways
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<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%"> | <div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%"> | ||
<h2 class="frontPagePanel blueFg">Viewing Pathways</h2> | <h2 class="frontPagePanel blueFg">Viewing Pathways</h2> | ||
| - | <h4> | + | <h4>Contents of the ''Pathway Page''</h4> |
| - | <font size=2> | + | <font size=2>Each ''Pathway Page'' in WikiPathays has a defined structure:</font> |
| - | < | + | <h5>Graphical representation</h5> |
| + | <font size=2>The graphical representation of the pathway is at the top of the ''Pathway Page''. You can click on the image of the pathway to view the SVG version of the image. The pathway image is also available for [[:Help:Download|download]] in SVG and PNG formats. You can also click the ''Edit pathway'' link under the pathway image to start [[:Help:Editing Pathways|editing]] the pathway.</font> | ||
| + | |||
| + | <h5>Description</h5> | ||
| + | <font size=2>Directly under the image of the pathway is the ''Description'' section, which contains information about the pathway.</font> | ||
| + | |||
| + | <h5>Bibliography</h5> | ||
| + | <font size=2>Directly under the image of the pathway is the ''Description'' section, which contains information about the pathway.</font> | ||
| + | |||
| + | <h5>Text</h5> | ||
<font size=2>Each Pathway Page has a text description, itemized gene list, references and relevant links.</font> | <font size=2>Each Pathway Page has a text description, itemized gene list, references and relevant links.</font> | ||
| - | < | + | <h5>Data</h5> |
<font size=2>Each pathway is also available for download as a GPML data file (GenMAPP Pathway Markup Language), an XML for annotated, curated pathway content. This format can be used with PathVisio. Pathways are also available as .mapp files for use in GenMAPP.</font> | <font size=2>Each pathway is also available for download as a GPML data file (GenMAPP Pathway Markup Language), an XML for annotated, curated pathway content. This format can be used with PathVisio. Pathways are also available as .mapp files for use in GenMAPP.</font> | ||
| + | <h5>History</h5> | ||
| + | <font size=2>Under the </font> | ||
<p><font size=2>[[:Help:Contents|Return to Help Contents]]</font></p> | <p><font size=2>[[:Help:Contents|Return to Help Contents]]</font></p> | ||
Revision as of 00:05, 26 April 2007
Viewing Pathways
Contents of the Pathway Page
Each Pathway Page in WikiPathays has a defined structure:
Graphical representation
The graphical representation of the pathway is at the top of the Pathway Page. You can click on the image of the pathway to view the SVG version of the image. The pathway image is also available for download in SVG and PNG formats. You can also click the Edit pathway link under the pathway image to start editing the pathway.
Description
Directly under the image of the pathway is the Description section, which contains information about the pathway.
Bibliography
Directly under the image of the pathway is the Description section, which contains information about the pathway.
Text
Each Pathway Page has a text description, itemized gene list, references and relevant links.
Data
Each pathway is also available for download as a GPML data file (GenMAPP Pathway Markup Language), an XML for annotated, curated pathway content. This format can be used with PathVisio. Pathways are also available as .mapp files for use in GenMAPP.
History
Under the
