Help:Databases/Resources
From WikiPathways
(Difference between revisions)
| Line 2: | Line 2: | ||
* [http://ensembl.org/ Ensembl] for vertebrates, metazoa and fungi | * [http://ensembl.org/ Ensembl] for vertebrates, metazoa and fungi | ||
| - | + | * [http://bacteria.ensembl.org/index.html Ensembl Genomes] for plants and bacterial collections | |
| - | * [http://bacteria.ensembl.org/index.html Ensembl Genomes] for bacterial collections | + | |
Small molecule, metabolite databases are generated from the following resources: | Small molecule, metabolite databases are generated from the following resources: | ||
* [http://www.hmdb.ca/ HMDB] | * [http://www.hmdb.ca/ HMDB] | ||
Revision as of 20:43, 28 June 2010
Gene and protein databases are built in sync with Ensembl's build releases. The BridgeDb system can generate Derby database for WikiPathways from any "ensemblized" genome database. Our current sources include:
- Ensembl for vertebrates, metazoa and fungi
- Ensembl Genomes for plants and bacterial collections
Small molecule, metabolite databases are generated from the following resources:
