Help:DataVisualizationInCytoscape
From WikiPathways
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(→Download and prepare tutorial data) |
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== Download and prepare tutorial data == | == Download and prepare tutorial data == | ||
| + | The experimental data for this tutorial can be found here: [[link to follow]]. | ||
| + | The data is in the form of an Excel spreadsheet, which can be read by Cytoscape. | ||
= Importing and mapping data = | = Importing and mapping data = | ||
Revision as of 22:14, 5 January 2016
UNDER CONSTRUCTION
Contents |
Installation
Install Cytoscape
- Download Cytoscape here: http://www.cytoscape.org/.
- Launch Cytoscape
Install WP Apps
- In Cytoscape, open the App Manager under Apps > App Manager.
- In the Search field, type WikiPathways to search for the WikiPathways app. In the search results, select the WikiPathways app and click Install.
- Next, find and install the BridgeDb app in the same way. When the installation is complete, click Close to exit the App Manager.
Alternatively, Cytoscape apps can be installed directly from the Cytoscape App Store. If Cytoscape is open on your computer, you can click Install on the relevant app page, and the app will install.
Download and prepare tutorial data
The experimental data for this tutorial can be found here: link to follow.
The data is in the form of an Excel spreadsheet, which can be read by Cytoscape.
