Glucosinolate biosynthesis from branched-chain amino acid (Arabidopsis thaliana)

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1Valine, leucine and isoleucine biosynthesisL-ValineCYP79D2(E)-2-Methylpropanal oximeMetaboliteMetaboliteMetaboliteCatalystCatalystCatalystCatalystCatalyst2-Oxo-3-methyl-butanoic acid2-Oxo-4-methyl-pentanoic acid2-Oxo-3-methyl-pentanoic acidL-leucineL-isoleucine1-Methylethyl glucosinolateCatalystCatalyst3-Methylbutyraldehyde oximeMetaboliteMetaboliteMetabolite2-Methylpropyl glucosinolate(E)-2-Methylbutanal oximeMetaboliteMetaboliteMetabolite1-Methylpropyl glucosinolateCatalystCatalystCatalystCatalystCatalystCatalystCatalystCatalystCatalystCYP79D4CYP79D1CYP79D3


Description

This pathway describes the glucosinolate derived from branched-chain amino acid (Val, Leu, Ile) in Arabidopsis thaliana. This is based on the KEGG pathway. Some pathway entities are unknown and being investigated, these are denoted as "Catalyst" and "Metabolite" for now.

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Quality Tags

Ontology Terms

 

Bibliography

  1. Wittstock U, Burow M; ''Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological significance.''; Arabidopsis Book, 2010 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
118601view16:26, 28 May 2021EweitzModified title
107048view14:13, 17 September 2019MaintBotChEBI identifier normalization
105285view17:47, 26 July 2019KhanspersModified description
105268view21:06, 25 July 2019KhanspersOntology Term : 'classic metabolic pathway' added !
104269view09:20, 14 May 2019AfukushimaModified title
104264view04:21, 14 May 2019MikikotModified description
104263view04:19, 14 May 2019MikikotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
(E)-2-Methylbutanal oximeMetaboliteC19491 (KEGG Compound)
(E)-2-Methylpropanal oximeMetaboliteC03219 (KEGG Compound)
1-Methylethyl glucosinolateMetabolite5414 (ChEBI)
1-Methylpropyl glucosinolateMetaboliteC08407 (KEGG Compound)
2-Methylpropyl glucosinolateMetaboliteC17256 (KEGG Compound)
2-Oxo-3-methyl-butanoic acidMetaboliteCHEBI:16530 (ChEBI)
2-Oxo-3-methyl-pentanoic acidMetabolite47 (PubChem-compound)
2-Oxo-4-methyl-pentanoic acidMetabolite70 (PubChem-compound)
3-Methylbutyraldehyde oximeMetaboliteC17255 (KEGG Compound)
CYP79D1GeneProductK13401 (KEGG Genes)
CYP79D2GeneProductK13401 (KEGG Genes)
CYP79D3GeneProductK14984 (KEGG Genes)
CYP79D4GeneProductK14984 (KEGG Genes)
CatalystGeneProduct
L-ValineMetaboliteCHEBI:16414 (ChEBI)
L-isoleucineMetaboliteCHEBI:17191 (ChEBI)
L-leucineMetaboliteCHEBI:15603 (ChEBI)
MetaboliteMetabolite

Annotated Interactions

No annotated interactions

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