Activation of NLRP3 inflammasome by SARS-CoV-2 (Homo sapiens)

From WikiPathways

Revision as of 00:48, 1 April 2020 by AlexanderPico (Talk | contribs)
Jump to: navigation, search
1Cytokine StormNucleusIL1BTRAF3NLRP3RELANFKB1NFKB1 p105Orf3aUbIL1Bpro-IL1Bpro-IL1BASCUbCASP1pro-CASP1


Description

Orf3a from SARS-CoV has been shown to bind TRAF3 and activate the NLRP3 inflammasome. The activation occurs at two points. First, by ubiquinating NF-kB (p105) to stimulate its proteolytic processing into mature NF-kB (p50), which can then go on to promote the transcription of pro-IL-1B together with RELA (p65). And second, by ubiquitinating ASC (PYCARD) in the NLRP3 inflammasome, which leads to its degradtion and the activation of caspase-1 (CASP1) that goes on to catalyze the production of mature IL-1B, leading to a cytokine storm. While Orf3a of SARS-CoV-2 only has 72.7% sequence identity with that of SARS-CoV, the TRAF3 binding motif PxQxS is 100% conserved: https://alexanderpico.github.io/SARS-CoV-2_Alignments/#Orf3a.

Try the New WikiPathways

View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

  1. Siu KL, Yuen KS, Castaño-Rodriguez C, Ye ZW, Yeung ML, Fung SY, Yuan S, Chan CP, Yuen KY, Enjuanes L, Jin DY; ''Severe acute respiratory syndrome coronavirus ORF3a protein activates the NLRP3 inflammasome by promoting TRAF3-dependent ubiquitination of ASC.''; FASEB J, 2019 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
134900view21:56, 28 July 2024EweitzRefine layering
128078view01:05, 24 January 2024EweitzUpgrade text node to identified pathway node
128077view00:59, 24 January 2024EweitzUpgrade TBar to mim-inhibition
124661view13:38, 18 November 2022NhungPupdate viral proteins shapes
124626view12:09, 18 November 2022NhungPChange viral protein shape
124426view12:29, 27 October 2022Mkutmonlower case SARS-CoV-2 protein names
120600view21:52, 17 December 2021EweitzRefine case
118876view12:04, 3 June 2021EweitzOntology Term : 'COVID-19' added !
116806view10:10, 14 May 2021EweitzModified title
110321view22:52, 3 May 2020Marvin M2Changed the two unconnected lines into graphical lines
110211view13:12, 24 April 2020EgonwTyped proteins as Type="Protein"
109977view18:20, 8 April 2020AlexanderPicoupdated sars nodes per #covidpathways guidelines
109841view01:49, 2 April 2020AlexanderPicoupdated Orf3a with protein xref
109834view00:22, 2 April 2020AlexanderPicoModified description
109833view00:18, 2 April 2020AlexanderPicoAdded chloroquine and lit ref
109786view00:54, 1 April 2020AlexanderPicoModified description
109783view00:49, 1 April 2020AlexanderPicoOntology Term : 'regulatory pathway' added !
109782view00:49, 1 April 2020AlexanderPicoOntology Term : 'interleukin-1 signaling pathway' added !
109781view00:48, 1 April 2020AlexanderPicoOntology Term : 'severe acute respiratory syndrome' added !
109780view00:48, 1 April 2020AlexanderPicoOntology Term : 'viral infectious disease' added !
109779view00:37, 1 April 2020AlexanderPicoModified description
109778view00:34, 1 April 2020AlexanderPicoNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ASCGeneProductENSG00000103490 (Ensembl)
CASP1GeneProductENSG00000137752 (Ensembl)
IL1BGeneProductENSG00000125538 (Ensembl)
NFKB1 p105GeneProductENSG00000109320 (Ensembl)
NFKB1GeneProductENSG00000109320 (Ensembl)
NLRP3GeneProductENSG00000162711 (Ensembl)
Orf3aGeneProduct43740569 (Entrez Gene)
RELAGeneProductENSG00000173039 (Ensembl)
TRAF3GeneProductENSG00000131323 (Ensembl)
pro-CASP1GeneProductENSG00000137752 (Ensembl)
pro-IL1BRnaENSG00000125538 (Ensembl)

Annotated Interactions

No annotated interactions

Personal tools