Selenoamino acid metabolism (Homo sapiens)

From WikiPathways

Revision as of 16:26, 25 January 2021 by ReactomeTeam (Talk | contribs)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search
37161714451, 1322164312, 3572932, 36, 38251415, 302, 10, 243, 1972223, 276, 111, 13299, 18, 34712, 139, 18, 342820, 2621, 338cytosoltRNA(Met)SARC 5S rRNA ATPRPS12 RPS4Y1 RPL3L Met-tRNAi SARS RPS11 80S:Met-tRNAi:mRNA:SECISBP2:SecPAPSS1,2RPL23 RPS4Y2 RPL23 PXLP-K119-CBStetramerRPS27 PAPSS1 RPL38 H+RPL37 RPL23A RPS4Y2 PXLP-K259-SCLY dimerFAD RPL3 reduced acceptorRPS20 MNA SECISBP2 RPS4X RPS7 PAPSeRheme GTP MSDMRPL21 RPS9 NADPHH2OSecRPS3A RPL7A RPS10 SEPHS2RPS10 mRNA RPL41 ATPFAU AdoSeMetNADP+L-SerRPL28 PPiATPMAT1A multimersRPL13A RPS4Y2 MeSeHINMTtRNA(Sec)RPL10L HSeMTRPS25 SECISBP2PXLP-K284-SEPSECStetramerRPL7 EEFSEC RPL10 RPL24 18S rRNA K+ H2ORPS7 RPS14 RPL36A RPL39L RPS23 RPL18 RARS 80S:Met-tRNAi:mRNA5S rRNA Sec-tRNA(Sec)RPL22 RPS2 RPS13 RPS10 PiRPL6 NAM RPS18 RPS26 RPL35A RPS3A RPS3A RPL31 RPL37 RPL23A RPL3 IARS RPL15 KARS bGalNAc derivativeRPL11 RPS29 MeSebGalNacSELPRPL38 RPS4X RPS26 PXLP-K212-CTH RPLP0 RPS19 RPS20 L-AlaRPS12 aminoacyl-tRNAsynthetasemultienzyme complexRPL22L1 RPL5 GSSebGalNacAMPGly GSSGRPLP1 RPL34 RPS26 SECISBP2 RPL27A RPS27A(77-156) RPS15A EEFSEC RPL22 RPL10A RPL36 RPL36AL PAPSS2 Mg2+ RPL27A RPL34 RPS15A AdoMetTXNRD1 RPS9 GDP RPL32 RPL13A ADPH2Se28S rRNA RPL21 RPL11 RPS20 PPiH2ORPL12 Sec RPL9 Me2SePiRPL35 RPL39 Sec-tRNA(Sec) PAPSS1,2RPL12 Met-tRNAi RPL22L1 RPL10 2OBUTARPS8 RPL37 H2ORPL5 RPL10A AdeSeHCysRPL39L RPL26L1 NH3GTP RPL26L1 pyruvic acidRPL26 RPS17 RPL18 RPS15 PXLP-K259-SCLY GSHRPL37A RPL9 RPS27 RPL34 RPL29 PSTK RPS28 RPL35A NADPHRPL18A 5S rRNA PPiRPL3L AdoHcyAMPRPS28 H+RPL23A RPL10A RPL18 RPS17 RPL27 RPL36 MeHist,N1MNA,MeGlyRPL8 FAD GSR-2 RPL15 AdoMetRPL22 RPS4X RPSA RPS27 RPL3 NADP+ADPATPRPS3 H+H2ORPL14 RPL30 RPL8 RPS11 RPL3L RPS13 GSSeHRPL38 GSHTXNRD1 RPSA MARS 5.8S rRNA RPL4 RPL9 RPL35A RPL10L H2OMeSeOHRPL27 RPS6 EEF1E1 TXNRD1 Hist AHCYRPS3 5.8S rRNA RPL7 LARS H2ORPS27L RPS13 RPL6 AdoMetRPL39 28S rRNA RPS8 PXLP-K284-SEPSECS 5.8S rRNA RPL41 RPL39 FAD 28S rRNA FAD RPS16 RPS12 H+RPS25 RPL13A RPL31 PXLP-K119-CBS RPSA ATPSeMetRPL10L RPS23 PAPSePXLP-K212-CTHtetramerMe3Se+RPL26L1 RPL40 RPLP0 RPL7A RPS3 FAU TNXRD1:FAD dimerGSHRPL4 SeMet-tRNA(Met)RPS2 GSSGRPS15A RPL32 RPL18A RPS21 H2ORPL17 RPL23 Mg2+ mRNA Sep-tRNA(Sec)MeHist RPS24 SeCystaSeHCysRPS8 RPL30 RPL36A RPS16 RPL35 RPLP2 RPL36AL ATPRPL17 18S rRNA RPS14 RPL26 H2ORPS4Y1 SARS dimerRPL8 AIMP2 RPL36A RPL19 RPL14 GNMT RPL37A H2SeO4RPS15 RPL32 RPL21 RPL4 RPS14 RPS18 RPS5 RPL40 RPL39L bGalNAcAde-RibNH3EEFSEC:GTPRPL14 RPL18A PiNNMT 80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPRPL27 PXLP-K212-CTH Sec-tRNA(Sec):EEFSEC:GTPH+acceptorMeOHAPSeH+NADPHRPS2 MetTrans(1)TNXRD1:FAD dimerGSHRPL22L1 RPS9 RPL41 RPL35 RPS27L H+RPS5 NADPHRPS6 RPL10 RPL36 RPL24 RPS27L RPLP1 RPL36AL H2OPAPRPS21 FAU RPL37A RPL6 RPLP2 RPS7 MeSecRPL26 mRNA RPS6 RPS29 RPS5 AMPRPS11 RPS24 H2ORPS25 RPLP2 RPS16 MeSeO2HRPL40 NADPHAIMP1(1-312) Sec-tRNA(Sec) RPL28 MAT1A RPL13 GSSeSGRPS27A(77-156) ATPPSTK:Mg2+PXLP-K212-CTHtetramerRPS27A(77-156) RPL19 RPS17 GTP SeO3(2-)NADP+AdoHcyRPL19 RPS28 RPLP0 RPL11 DARS RPL28 RPS15 PAPSS2 GSR-2:FAD dimerHNMT RPL27A RPL7 TNXRD1:FAD dimerPPiEEFSEC:GDPRPL5 RPS24 H2ORPL31 MeSeHMTL-SerAdoHcyEPRS QARS NADP+RPL29 RPL29 2-acetamidoglucalRPL13 NADP+EEFSEC RPL7A AdoHcyH2ORPS19 RPS18 RPS4Y1 Met-tRNAi RPLP1 EEFSEC Hist,NAM,Gly18S rRNA RPL12 RPL15 RPS21 RPS29 PAPSS1 RPL30 RPL17 RPS19 Ser-tRNA(Sec)RPL13 RPL24 2OBUTAPiRPS23 H2O31


Description

Selenium (Se) is a trace element essential for the normal function of the body. Selenoamino acids are defined as those amino acids where selenium has been substituted for sulphur. Selenium and sulphur share many chemical properties and so the substitution of normal amino acids with selenoamino acids has little effect on protein structure and function. Both inorganic (selenite, SeO3(2-); and selenate, SeO4(2-)) and organic (selenocysteine, Sec; and selenomethionine, SeMet) forms of selenium can be introduced in the diet where they are transformed into the intermediate selenide (Se(2-)) and then utilized for the de novo synthesis of Sec through a phosphorylated intermediate in a tRNA-dependent fashion. The final step of Sec formation is catalyzed by O-phosphoseryl-tRNA:selenocysteinyl-tRNA synthase (SEPSECS) that converts phosphoseryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec).

All nutritional selenium is metabolised into selenide directly or through methylselenol (MeSeH). Sec liberated from selenoproteins is transformed to Se(2-) by selenocysteine lyase (SCLY). SeMet liberated from general proteins and from free SeMet sources is transformed into Se(2-) either through MeSeH by cystathionine gamma-lyase (CTH) followed by demethylation (SeMet to CH3SeH to H2Se), or through Sec by SCLY after the trans-selenation pathway (SeMet to Sec to H2Se). MeSec is hydrolysed into MeSeH by CTH. Methylseleninic acid (MeSeO2H) is reduced to methylselenol. MeSeH is demethylated to Se(2-) for further utilization for selenoprotein synthesis or oxidised to selenite (SeO3(2-)) for excretion in the form of selenosugar. Additionally, MeSeH is further methylated to dimethylselenide (Me2Se) and trimethylselenonium (Me3Se+) for excretion. View original pathway at Reactome.

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 2408522
Reactome-version 
Reactome version: 74
Reactome Author 
Reactome Author: Williams, MG

Try the New WikiPathways

View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

View all...
  1. Sun QA, Wu Y, Zappacosta F, Jeang KT, Lee BJ, Hatfield DL, Gladyshev VN.; ''Redox regulation of cell signaling by selenocysteine in mammalian thioredoxin reductases.''; PubMed Europe PMC Scholia
  2. Björnstedt M, Kumar S, Holmgren A.; ''Selenodiglutathione is a highly efficient oxidant of reduced thioredoxin and a substrate for mammalian thioredoxin reductase.''; PubMed Europe PMC Scholia
  3. Chavatte L, Brown BA, Driscoll DM.; ''Ribosomal protein L30 is a component of the UGA-selenocysteine recoding machinery in eukaryotes.''; PubMed Europe PMC Scholia
  4. Gromer S, Gross JH.; ''Methylseleninate is a substrate rather than an inhibitor of mammalian thioredoxin reductase. Implications for the antitumor effects of selenium.''; PubMed Europe PMC Scholia
  5. Bánszky L, Simonics T, Maráz A.; ''Sulphate metabolism of selenate-resistant Schizosaccharomyces pombe mutants.''; PubMed Europe PMC Scholia
  6. Wolfe CL, Warrington JA, Davis S, Green S, Norcum MT.; ''Isolation and characterization of human nuclear and cytosolic multisynthetase complexes and the intracellular distribution of p43/EMAPII.''; PubMed Europe PMC Scholia
  7. Tujebajeva RM, Copeland PR, Xu XM, Carlson BA, Harney JW, Driscoll DM, Hatfield DL, Berry MJ.; ''Decoding apparatus for eukaryotic selenocysteine insertion.''; PubMed Europe PMC Scholia
  8. Okuno T, Kubota T, Kuroda T, Ueno H, Nakamuro K.; ''Contribution of enzymic alpha, gamma-elimination reaction in detoxification pathway of selenomethionine in mouse liver.''; PubMed Europe PMC Scholia
  9. Tamura T, Yamamoto S, Takahata M, Sakaguchi H, Tanaka H, Stadtman TC, Inagaki K.; ''Selenophosphate synthetase genes from lung adenocarcinoma cells: Sps1 for recycling L-selenocysteine and Sps2 for selenite assimilation.''; PubMed Europe PMC Scholia
  10. Mozier NM, McConnell KP, Hoffman JL.; ''S-adenosyl-L-methionine:thioether S-methyltransferase, a new enzyme in sulfur and selenium metabolism.''; PubMed Europe PMC Scholia
  11. Vincent C, Tarbouriech N, Härtlein M.; ''Genomic organization, cDNA sequence, bacterial expression, and purification of human seryl-tRNA synthase.''; PubMed Europe PMC Scholia
  12. Palioura S, Sherrer RL, Steitz TA, Söll D, Simonovic M.; ''The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.''; PubMed Europe PMC Scholia
  13. Heckl M, Busch K, Gross HJ.; ''Minimal tRNA(Ser) and tRNA(Sec) substrates for human seryl-tRNA synthetase: contribution of tRNA domains to serylation and tertiary structure.''; PubMed Europe PMC Scholia
  14. Xu ZH, Otterness DM, Freimuth RR, Carlini EJ, Wood TC, Mitchell S, Moon E, Kim UJ, Xu JP, Siciliano MJ, Weinshilboum RM.; ''Human 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 (PAPSS1) and PAPSS2: gene cloning, characterization and chromosomal localization.''; PubMed Europe PMC Scholia
  15. Suzuki KT, Somekawa L, Suzuki N.; ''Distribution and reuse of 76Se-selenosugar in selenium-deficient rats.''; PubMed Europe PMC Scholia
  16. Fagegaltier D, Hubert N, Yamada K, Mizutani T, Carbon P, Krol A.; ''Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation.''; PubMed Europe PMC Scholia
  17. Carlson BA, Xu XM, Kryukov GV, Rao M, Berry MJ, Gladyshev VN, Hatfield DL.; ''Identification and characterization of phosphoseryl-tRNA[Ser]Sec kinase.''; PubMed Europe PMC Scholia
  18. Omi R, Kurokawa S, Mihara H, Hayashi H, Goto M, Miyahara I, Kurihara T, Hirotsu K, Esaki N.; ''Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.''; PubMed Europe PMC Scholia
  19. Hsieh HS, Ganther HE.; ''Biosynthesis of dimethyl selenide from sodium selenite in rat liver and kidney cell-free systems.''; PubMed Europe PMC Scholia
  20. Okuno T, Ueno H, Nakamuro K.; ''Cystathionine gamma-lyase contributes to selenomethionine detoxification and cytosolic glutathione peroxidase biosynthesis in mouse liver.''; PubMed Europe PMC Scholia
  21. Kumar S, Björnstedt M, Holmgren A.; ''Selenite is a substrate for calf thymus thioredoxin reductase and thioredoxin and elicits a large non-stoichiometric oxidation of NADPH in the presence of oxygen.''; PubMed Europe PMC Scholia
  22. Eustice DC, Kull FJ, Shrift A.; ''Selenium toxicity: aminoacylation and Peptide bond formation with selenomethionine.''; PubMed Europe PMC Scholia
  23. Fairweather-Tait SJ, Bao Y, Broadley MR, Collings R, Ford D, Hesketh JE, Hurst R.; ''Selenium in human health and disease.''; PubMed Europe PMC Scholia
  24. Kajander EO, Harvima RJ, Kauppinen L, Akerman KK, Martikainen H, Pajula RL, Kärenlampi SO.; ''Effects of selenomethionine on cell growth and on S-adenosylmethionine metabolism in cultured malignant cells.''; PubMed Europe PMC Scholia
  25. Pinto JT, Lee JI, Sinha R, MacEwan ME, Cooper AJ.; ''Chemopreventive mechanisms of α-keto acid metabolites of naturally occurring organoselenium compounds.''; PubMed Europe PMC Scholia
  26. Kajander EO, Harvima RJ, Eloranta TO, Martikainen H, Kantola M, Kärenlampi SO, Akerman K.; ''Metabolism, cellular actions, and cytotoxicity of selenomethionine in cultured cells.''; PubMed Europe PMC Scholia
  27. Ohta Y, Suzuki KT.; ''Methylation and demethylation of intermediates selenide and methylselenol in the metabolism of selenium.''; PubMed Europe PMC Scholia
  28. Venkatachalam KV, Akita H, Strott CA.; ''Molecular cloning, expression, and characterization of human bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase and its functional domains.''; PubMed Europe PMC Scholia
  29. Burnell JN.; ''Methionyl-tRNA Synthetase from Phaseolus aureus: Purification and Properties.''; PubMed Europe PMC Scholia
  30. Okuno T, Motobayashi S, Ueno H, Nakamuro K.; ''Purification and characterization of mouse hepatic enzyme that converts selenomethionine to methylselenol by its alpha,gamma-elimination.''; PubMed Europe PMC Scholia
  31. Kajander EO, Raina AM.; ''Affinity-chromatographic purification of S-adenosyl-L-homocysteine hydrolase. Some properties of the enzyme from rat liver.''; PubMed Europe PMC Scholia
  32. Daher R, Van Lente F.; ''Characterization of selenocysteine lyase in human tissues and its relationship to tissue selenium concentrations.''; PubMed Europe PMC Scholia
  33. Kobayashi Y, Ogra Y, Ishiwata K, Takayama H, Aimi N, Suzuki KT.; ''Selenosugars are key and urinary metabolites for selenium excretion within the required to low-toxic range.''; PubMed Europe PMC Scholia
  34. Esaki N, Nakamura T, Tanaka H, Suzuki T, Morino Y, Soda K.; ''Enzymatic synthesis of selenocysteine in rat liver.''; PubMed Europe PMC Scholia
  35. Yu M, Martin RL, Jain S, Chen LJ, Segel IH.; ''Rat liver ATP-sulfurylase: purification, kinetic characterization, and interaction with arsenate, selenate, phosphate, and other inorganic oxyanions.''; PubMed Europe PMC Scholia
  36. Suzuki KT, Kurasaki K, Suzuki N.; ''Selenocysteine beta-lyase and methylselenol demethylase in the metabolism of Se-methylated selenocompounds into selenide.''; PubMed Europe PMC Scholia
  37. Amberg R, Mizutani T, Wu XQ, Gross HJ.; ''Selenocysteine synthesis in mammalia: an identity switch from tRNA(Ser) to tRNA(Sec).''; PubMed Europe PMC Scholia
  38. Yuan J, Palioura S, Salazar JC, Su D, O'Donoghue P, Hohn MJ, Cardoso AM, Whitman WB, Söll D.; ''RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea.''; PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
114774view16:26, 25 January 2021ReactomeTeamReactome version 75
113218view11:28, 2 November 2020ReactomeTeamReactome version 74
112442view15:38, 9 October 2020ReactomeTeamReactome version 73
101347view11:23, 1 November 2018ReactomeTeamreactome version 66
100885view20:57, 31 October 2018ReactomeTeamreactome version 65
100426view19:31, 31 October 2018ReactomeTeamreactome version 64
99976view16:15, 31 October 2018ReactomeTeamreactome version 63
99530view14:51, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99168view12:42, 31 October 2018ReactomeTeamreactome version 62
93759view13:34, 16 August 2017ReactomeTeamreactome version 61
93281view11:19, 9 August 2017ReactomeTeamreactome version 61
87653view08:55, 25 July 2016LindarieswijkOntology Term : 'selenoamino acid metabolic pathway' added !
86360view09:16, 11 July 2016ReactomeTeamNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
18S rRNA ProteinX03205 (EMBL)
2-acetamidoglucalMetaboliteCHEBI:73979 (ChEBI)
28S rRNA ProteinM11167 (EMBL)
2OBUTAMetaboliteCHEBI:30831 (ChEBI)
5.8S rRNA ProteinJ01866 (EMBL)
5S rRNA ProteinV00589 (EMBL)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPComplexR-HSA-5359044 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:SecComplexR-HSA-5359053 (Reactome)
80S:Met-tRNAi:mRNAComplexR-HSA-72505 (Reactome)
ADPMetaboliteCHEBI:456216 (ChEBI)
AHCYProteinP23526 (Uniprot-TrEMBL)
AIMP1(1-312) ProteinQ12904 (Uniprot-TrEMBL)
AIMP2 ProteinQ13155 (Uniprot-TrEMBL)
AMPMetaboliteCHEBI:16027 (ChEBI)
APSeMetaboliteCHEBI:2485 (ChEBI)
ATPMetaboliteCHEBI:30616 (ChEBI)
Ade-RibMetaboliteCHEBI:16335 (ChEBI)
AdeSeHCysMetaboliteCHEBI:77028 (ChEBI)
AdoHcyMetaboliteCHEBI:16680 (ChEBI)
AdoMetMetaboliteCHEBI:15414 (ChEBI)
AdoSeMetMetaboliteCHEBI:9066 (ChEBI)
DARS ProteinP14868 (Uniprot-TrEMBL)
EEF1E1 ProteinO43324 (Uniprot-TrEMBL)
EEFSEC ProteinP57772 (Uniprot-TrEMBL)
EEFSEC:GDPComplexR-HSA-5359051 (Reactome)
EEFSEC:GTPComplexR-HSA-5359045 (Reactome)
EPRS ProteinP07814 (Uniprot-TrEMBL)
FAD MetaboliteCHEBI:16238 (ChEBI)
FAU ProteinP62861 (Uniprot-TrEMBL)
GDP MetaboliteCHEBI:17552 (ChEBI)
GNMT ProteinQ14749 (Uniprot-TrEMBL)
GSHMetaboliteCHEBI:16856 (ChEBI)
GSR-2 ProteinP00390-2 (Uniprot-TrEMBL)
GSR-2:FAD dimerComplexR-HSA-71680 (Reactome)
GSSGMetaboliteCHEBI:17858 (ChEBI)
GSSeHMetaboliteCHEBI:64729 (ChEBI)
GSSeSGMetaboliteCHEBI:26634 (ChEBI)
GSSebGalNacMetaboliteCHEBI:77008 (ChEBI)
GTP MetaboliteCHEBI:15996 (ChEBI)
Gly MetaboliteCHEBI:57305 (ChEBI)
H+MetaboliteCHEBI:15378 (ChEBI)
H2OMetaboliteCHEBI:15377 (ChEBI)
H2SeMetaboliteCHEBI:16503 (ChEBI)
H2SeO4MetaboliteCHEBI:18170 (ChEBI)
HNMT ProteinP50135 (Uniprot-TrEMBL)
HSeMTR-HSA-5359039 (Reactome)
Hist MetaboliteCHEBI:18295 (ChEBI)
Hist,NAM,GlyComplexR-ALL-5359033 (Reactome)
IARS ProteinP41252 (Uniprot-TrEMBL)
INMTProteinO95050 (Uniprot-TrEMBL)
K+ MetaboliteCHEBI:29103 (ChEBI)
KARS ProteinQ15046 (Uniprot-TrEMBL)
L-AlaMetaboliteCHEBI:57972 (ChEBI)
L-SerMetaboliteCHEBI:33384 (ChEBI)
LARS ProteinQ9P2J5 (Uniprot-TrEMBL)
MARS ProteinP56192 (Uniprot-TrEMBL)
MAT1A ProteinQ00266 (Uniprot-TrEMBL)
MAT1A multimersComplexR-HSA-174383 (Reactome)
MNA MetaboliteCHEBI:16797 (ChEBI)
MSDMR-HSA-5357666 (Reactome)
Me2SeMetaboliteCHEBI:4610 (ChEBI)
Me3Se+MetaboliteCHEBI:77058 (ChEBI)
MeHist MetaboliteCHEBI:29009 (ChEBI)
MeHist,N1MNA,MeGlyComplexR-ALL-5359014 (Reactome)
MeOHMetaboliteCHEBI:17790 (ChEBI)
MeSeHMetaboliteCHEBI:64685 (ChEBI)
MeSeHMTR-HSA-5359068 (Reactome)
MeSeO2HMetaboliteCHEBI:77012 (ChEBI)
MeSeOHMetaboliteCHEBI:77062 (ChEBI)
MeSebGalNacMetaboliteCHEBI:77010 (ChEBI)
MeSecMetaboliteCHEBI:27812 (ChEBI)
Met-tRNAi R-ALL-72393 (Reactome)
MetTrans(1)ComplexR-HSA-5359013 (Reactome)
Mg2+ MetaboliteCHEBI:18420 (ChEBI)
NADP+MetaboliteCHEBI:18009 (ChEBI)
NADPHMetaboliteCHEBI:16474 (ChEBI)
NAM MetaboliteCHEBI:17154 (ChEBI)
NH3MetaboliteCHEBI:16134 (ChEBI)
NNMT ProteinP40261 (Uniprot-TrEMBL)
PAPMetaboliteCHEBI:17985 (ChEBI)
PAPSS1 ProteinO43252 (Uniprot-TrEMBL)
PAPSS1,2ComplexR-HSA-174400 (Reactome)
PAPSS2 ProteinO95340 (Uniprot-TrEMBL)
PAPSeMetaboliteCHEBI:28450 (ChEBI)
PAPSeRR-HSA-5359054 (Reactome)
PPiMetaboliteCHEBI:29888 (ChEBI)
PSTK ProteinQ8IV42 (Uniprot-TrEMBL)
PSTK:Mg2+ComplexR-HSA-5359062 (Reactome)
PXLP-K119-CBS tetramerComplexR-HSA-1614610 (Reactome)
PXLP-K119-CBS ProteinP35520 (Uniprot-TrEMBL)
PXLP-K212-CTH tetramerComplexR-HSA-1625212 (Reactome)
PXLP-K212-CTH ProteinP32929 (Uniprot-TrEMBL)
PXLP-K259-SCLY ProteinQ96I15 (Uniprot-TrEMBL)
PXLP-K259-SCLY dimerComplexR-HSA-5359018 (Reactome)
PXLP-K284-SEPSECS tetramerComplexR-HSA-5357724 (Reactome)
PXLP-K284-SEPSECS ProteinQ9HD40 (Uniprot-TrEMBL)
PiMetaboliteCHEBI:43474 (ChEBI)
QARS ProteinP47897 (Uniprot-TrEMBL)
RARS ProteinP54136 (Uniprot-TrEMBL)
RPL10 ProteinP27635 (Uniprot-TrEMBL)
RPL10A ProteinP62906 (Uniprot-TrEMBL)
RPL10L ProteinQ96L21 (Uniprot-TrEMBL)
RPL11 ProteinP62913 (Uniprot-TrEMBL)
RPL12 ProteinP30050 (Uniprot-TrEMBL)
RPL13 ProteinP26373 (Uniprot-TrEMBL)
RPL13A ProteinP40429 (Uniprot-TrEMBL)
RPL14 ProteinP50914 (Uniprot-TrEMBL)
RPL15 ProteinP61313 (Uniprot-TrEMBL)
RPL17 ProteinP18621 (Uniprot-TrEMBL)
RPL18 ProteinQ07020 (Uniprot-TrEMBL)
RPL18A ProteinQ02543 (Uniprot-TrEMBL)
RPL19 ProteinP84098 (Uniprot-TrEMBL)
RPL21 ProteinP46778 (Uniprot-TrEMBL)
RPL22 ProteinP35268 (Uniprot-TrEMBL)
RPL22L1 ProteinQ6P5R6 (Uniprot-TrEMBL)
RPL23 ProteinP62829 (Uniprot-TrEMBL)
RPL23A ProteinP62750 (Uniprot-TrEMBL)
RPL24 ProteinP83731 (Uniprot-TrEMBL)
RPL26 ProteinP61254 (Uniprot-TrEMBL)
RPL26L1 ProteinQ9UNX3 (Uniprot-TrEMBL)
RPL27 ProteinP61353 (Uniprot-TrEMBL)
RPL27A ProteinP46776 (Uniprot-TrEMBL)
RPL28 ProteinP46779 (Uniprot-TrEMBL)
RPL29 ProteinP47914 (Uniprot-TrEMBL)
RPL3 ProteinP39023 (Uniprot-TrEMBL)
RPL30 ProteinP62888 (Uniprot-TrEMBL)
RPL31 ProteinP62899 (Uniprot-TrEMBL)
RPL32 ProteinP62910 (Uniprot-TrEMBL)
RPL34 ProteinP49207 (Uniprot-TrEMBL)
RPL35 ProteinP42766 (Uniprot-TrEMBL)
RPL35A ProteinP18077 (Uniprot-TrEMBL)
RPL36 ProteinQ9Y3U8 (Uniprot-TrEMBL)
RPL36A ProteinP83881 (Uniprot-TrEMBL)
RPL36AL ProteinQ969Q0 (Uniprot-TrEMBL)
RPL37 ProteinP61927 (Uniprot-TrEMBL)
RPL37A ProteinP61513 (Uniprot-TrEMBL)
RPL38 ProteinP63173 (Uniprot-TrEMBL)
RPL39 ProteinP62891 (Uniprot-TrEMBL)
RPL39L ProteinQ96EH5 (Uniprot-TrEMBL)
RPL3L ProteinQ92901 (Uniprot-TrEMBL)
RPL4 ProteinP36578 (Uniprot-TrEMBL)
RPL40 ProteinP62987 (Uniprot-TrEMBL)
RPL41 ProteinP62945 (Uniprot-TrEMBL)
RPL5 ProteinP46777 (Uniprot-TrEMBL)
RPL6 ProteinQ02878 (Uniprot-TrEMBL)
RPL7 ProteinP18124 (Uniprot-TrEMBL)
RPL7A ProteinP62424 (Uniprot-TrEMBL)
RPL8 ProteinP62917 (Uniprot-TrEMBL)
RPL9 ProteinP32969 (Uniprot-TrEMBL)
RPLP0 ProteinP05388 (Uniprot-TrEMBL)
RPLP1 ProteinP05386 (Uniprot-TrEMBL)
RPLP2 ProteinP05387 (Uniprot-TrEMBL)
RPS10 ProteinP46783 (Uniprot-TrEMBL)
RPS11 ProteinP62280 (Uniprot-TrEMBL)
RPS12 ProteinP25398 (Uniprot-TrEMBL)
RPS13 ProteinP62277 (Uniprot-TrEMBL)
RPS14 ProteinP62263 (Uniprot-TrEMBL)
RPS15 ProteinP62841 (Uniprot-TrEMBL)
RPS15A ProteinP62244 (Uniprot-TrEMBL)
RPS16 ProteinP62249 (Uniprot-TrEMBL)
RPS17 ProteinP08708 (Uniprot-TrEMBL)
RPS18 ProteinP62269 (Uniprot-TrEMBL)
RPS19 ProteinP39019 (Uniprot-TrEMBL)
RPS2 ProteinP15880 (Uniprot-TrEMBL)
RPS20 ProteinP60866 (Uniprot-TrEMBL)
RPS21 ProteinP63220 (Uniprot-TrEMBL)
RPS23 ProteinP62266 (Uniprot-TrEMBL)
RPS24 ProteinP62847 (Uniprot-TrEMBL)
RPS25 ProteinP62851 (Uniprot-TrEMBL)
RPS26 ProteinP62854 (Uniprot-TrEMBL)
RPS27 ProteinP42677 (Uniprot-TrEMBL)
RPS27A(77-156) ProteinP62979 (Uniprot-TrEMBL)
RPS27L ProteinQ71UM5 (Uniprot-TrEMBL)
RPS28 ProteinP62857 (Uniprot-TrEMBL)
RPS29 ProteinP62273 (Uniprot-TrEMBL)
RPS3 ProteinP23396 (Uniprot-TrEMBL)
RPS3A ProteinP61247 (Uniprot-TrEMBL)
RPS4X ProteinP62701 (Uniprot-TrEMBL)
RPS4Y1 ProteinP22090 (Uniprot-TrEMBL)
RPS4Y2 ProteinQ8TD47 (Uniprot-TrEMBL)
RPS5 ProteinP46782 (Uniprot-TrEMBL)
RPS6 ProteinP62753 (Uniprot-TrEMBL)
RPS7 ProteinP62081 (Uniprot-TrEMBL)
RPS8 ProteinP62241 (Uniprot-TrEMBL)
RPS9 ProteinP46781 (Uniprot-TrEMBL)
RPSA ProteinP08865 (Uniprot-TrEMBL)
SARC MetaboliteCHEBI:15611 (ChEBI)
SARS ProteinP49591 (Uniprot-TrEMBL)
SARS dimerComplexR-HSA-379557 (Reactome)
SECISBP2 ProteinQ96T21 (Uniprot-TrEMBL)
SECISBP2ProteinQ96T21 (Uniprot-TrEMBL)
SELPMetaboliteCHEBI:16144 (ChEBI)
SEPHS2ProteinQ99611 (Uniprot-TrEMBL)
SeCystaMetaboliteCHEBI:27760 (ChEBI)
SeHCysMetaboliteCHEBI:9096 (ChEBI)
SeMet-tRNA(Met)R-HSA-5357731 (Reactome)
SeMetMetaboliteCHEBI:30021 (ChEBI)
SeO3(2-)MetaboliteCHEBI:18212 (ChEBI)
Sec MetaboliteCHEBI:16633 (ChEBI)
Sec-tRNA(Sec) R-HSA-5357708 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPComplexR-HSA-5359036 (Reactome)
Sec-tRNA(Sec)R-HSA-5357708 (Reactome)
SecMetaboliteCHEBI:16633 (ChEBI)
Sep-tRNA(Sec)R-HSA-5357712 (Reactome)
Ser-tRNA(Sec)R-HSA-5357730 (Reactome)
TNXRD1:FAD dimerComplexR-HSA-73532 (Reactome)
TXNRD1 ProteinQ16881 (Uniprot-TrEMBL)
acceptorR-ALL-5359011 (Reactome)
aminoacyl-tRNA

synthetase

multienzyme complex
ComplexR-HSA-379688 (Reactome)
bGalNAc derivativeMetaboliteCHEBI:17806 (ChEBI)
bGalNAcMetaboliteCHEBI:28497 (ChEBI)
heme MetaboliteCHEBI:17627 (ChEBI)
mRNA R-HSA-72323 (Reactome)
pyruvic acidMetaboliteCHEBI:15361 (ChEBI)
reduced acceptorR-ALL-5359016 (Reactome)
tRNA(Met)R-HSA-379742 (Reactome)
tRNA(Sec)R-HSA-5357732 (Reactome)

Annotated Interactions

View all...
SourceTargetTypeDatabase referenceComment
2-acetamidoglucalArrowR-HSA-5333612 (Reactome)
2OBUTAArrowR-HSA-2408537 (Reactome)
2OBUTAArrowR-HSA-2408543 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPArrowR-HSA-2408529 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPmim-catalysisR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:SecArrowR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNAR-HSA-2408529 (Reactome)
ADPArrowR-HSA-2408507 (Reactome)
ADPArrowR-HSA-2408540 (Reactome)
AHCYmim-catalysisR-HSA-2408532 (Reactome)
AMPArrowR-HSA-2408526 (Reactome)
AMPArrowR-HSA-2408546 (Reactome)
AMPArrowR-HSA-8959510 (Reactome)
APSeArrowR-HSA-2408525 (Reactome)
APSeR-HSA-2408540 (Reactome)
ATPR-HSA-2408507 (Reactome)
ATPR-HSA-2408525 (Reactome)
ATPR-HSA-2408526 (Reactome)
ATPR-HSA-2408540 (Reactome)
ATPR-HSA-2408546 (Reactome)
ATPR-HSA-2408551 (Reactome)
ATPR-HSA-8959510 (Reactome)
Ade-RibArrowR-HSA-2408532 (Reactome)
AdeSeHCysArrowR-HSA-2408544 (Reactome)
AdeSeHCysR-HSA-2408532 (Reactome)
AdoHcyArrowR-HSA-2408536 (Reactome)
AdoHcyArrowR-HSA-2408541 (Reactome)
AdoHcyArrowR-HSA-2408554 (Reactome)
AdoHcyArrowR-HSA-5333608 (Reactome)
AdoMetR-HSA-2408536 (Reactome)
AdoMetR-HSA-2408541 (Reactome)
AdoMetR-HSA-2408554 (Reactome)
AdoMetR-HSA-5333608 (Reactome)
AdoSeMetArrowR-HSA-2408551 (Reactome)
AdoSeMetR-HSA-2408544 (Reactome)
EEFSEC:GDPArrowR-HSA-5333615 (Reactome)
EEFSEC:GTPR-HSA-2408509 (Reactome)
GSHArrowR-HSA-2408542 (Reactome)
GSHArrowR-HSA-5333608 (Reactome)
GSHR-HSA-2408500 (Reactome)
GSHR-HSA-2408556 (Reactome)
GSR-2:FAD dimermim-catalysisR-HSA-2408542 (Reactome)
GSSGArrowR-HSA-2408500 (Reactome)
GSSGArrowR-HSA-2408556 (Reactome)
GSSeHArrowR-HSA-2408542 (Reactome)
GSSeHR-HSA-2408500 (Reactome)
GSSeHR-HSA-5333607 (Reactome)
GSSeSGArrowR-HSA-2408556 (Reactome)
GSSeSGR-HSA-2408542 (Reactome)
GSSebGalNacArrowR-HSA-5333607 (Reactome)
GSSebGalNacR-HSA-5333608 (Reactome)
H+ArrowR-HSA-8959510 (Reactome)
H+R-HSA-2408542 (Reactome)
H+R-HSA-2408548 (Reactome)
H+R-HSA-2408556 (Reactome)
H+R-HSA-2408558 (Reactome)
H+R-HSA-5263614 (Reactome)
H+R-HSA-5263616 (Reactome)
H2OArrowR-HSA-2408548 (Reactome)
H2OArrowR-HSA-2408556 (Reactome)
H2OArrowR-HSA-2408558 (Reactome)
H2OArrowR-HSA-2408559 (Reactome)
H2OArrowR-HSA-5263614 (Reactome)
H2OArrowR-HSA-5263616 (Reactome)
H2OR-HSA-2408530 (Reactome)
H2OR-HSA-2408532 (Reactome)
H2OR-HSA-2408537 (Reactome)
H2OR-HSA-2408539 (Reactome)
H2OR-HSA-2408543 (Reactome)
H2OR-HSA-2408551 (Reactome)
H2OR-HSA-2408555 (Reactome)
H2OR-HSA-5333609 (Reactome)
H2OR-HSA-5333615 (Reactome)
H2OR-HSA-8959510 (Reactome)
H2SeArrowR-HSA-2408500 (Reactome)
H2SeArrowR-HSA-2408524 (Reactome)
H2SeArrowR-HSA-2408530 (Reactome)
H2SeArrowR-HSA-2408558 (Reactome)
H2SeO4R-HSA-2408525 (Reactome)
H2SeR-HSA-2408536 (Reactome)
H2SeR-HSA-8959510 (Reactome)
HSeMTmim-catalysisR-HSA-2408536 (Reactome)
Hist,NAM,GlyR-HSA-2408544 (Reactome)
INMTmim-catalysisR-HSA-2408554 (Reactome)
L-AlaArrowR-HSA-2408524 (Reactome)
L-SerR-HSA-2408526 (Reactome)
L-SerR-HSA-2408559 (Reactome)
MAT1A multimersmim-catalysisR-HSA-2408551 (Reactome)
MSDMmim-catalysisR-HSA-2408530 (Reactome)
Me2SeArrowR-HSA-2408541 (Reactome)
Me2SeR-HSA-2408554 (Reactome)
Me3Se+ArrowR-HSA-2408554 (Reactome)
MeHist,N1MNA,MeGlyArrowR-HSA-2408544 (Reactome)
MeOHArrowR-HSA-2408530 (Reactome)
MeSeHArrowR-HSA-2408536 (Reactome)
MeSeHArrowR-HSA-2408537 (Reactome)
MeSeHArrowR-HSA-2408539 (Reactome)
MeSeHArrowR-HSA-5263614 (Reactome)
MeSeHArrowR-HSA-5333609 (Reactome)
MeSeHMTmim-catalysisR-HSA-2408541 (Reactome)
MeSeHR-HSA-2408530 (Reactome)
MeSeHR-HSA-2408541 (Reactome)
MeSeO2HArrowR-HSA-5333612 (Reactome)
MeSeO2HR-HSA-5263616 (Reactome)
MeSeOHArrowR-HSA-5263616 (Reactome)
MeSeOHR-HSA-5263614 (Reactome)
MeSebGalNacArrowR-HSA-5333608 (Reactome)
MeSebGalNacR-HSA-5333609 (Reactome)
MeSebGalNacR-HSA-5333612 (Reactome)
MeSecR-HSA-2408539 (Reactome)
MetTrans(1)mim-catalysisR-HSA-2408544 (Reactome)
NADP+ArrowR-HSA-2408542 (Reactome)
NADP+ArrowR-HSA-2408548 (Reactome)
NADP+ArrowR-HSA-2408558 (Reactome)
NADP+ArrowR-HSA-5263614 (Reactome)
NADP+ArrowR-HSA-5263616 (Reactome)
NADPHR-HSA-2408542 (Reactome)
NADPHR-HSA-2408548 (Reactome)
NADPHR-HSA-2408558 (Reactome)
NADPHR-HSA-5263614 (Reactome)
NADPHR-HSA-5263616 (Reactome)
NH3ArrowR-HSA-2408537 (Reactome)
NH3ArrowR-HSA-2408539 (Reactome)
NH3ArrowR-HSA-2408543 (Reactome)
PAPArrowR-HSA-2408548 (Reactome)
PAPSS1,2mim-catalysisR-HSA-2408525 (Reactome)
PAPSS1,2mim-catalysisR-HSA-2408540 (Reactome)
PAPSeArrowR-HSA-2408540 (Reactome)
PAPSeR-HSA-2408548 (Reactome)
PAPSeRmim-catalysisR-HSA-2408548 (Reactome)
PPiArrowR-HSA-2408525 (Reactome)
PPiArrowR-HSA-2408526 (Reactome)
PPiArrowR-HSA-2408546 (Reactome)
PPiArrowR-HSA-2408551 (Reactome)
PSTK:Mg2+mim-catalysisR-HSA-2408507 (Reactome)
PXLP-K119-CBS tetramermim-catalysisR-HSA-2408559 (Reactome)
PXLP-K212-CTH tetramermim-catalysisR-HSA-2408537 (Reactome)
PXLP-K212-CTH tetramermim-catalysisR-HSA-2408539 (Reactome)
PXLP-K212-CTH tetramermim-catalysisR-HSA-2408543 (Reactome)
PXLP-K259-SCLY dimermim-catalysisR-HSA-2408524 (Reactome)
PXLP-K284-SEPSECS tetramermim-catalysisR-HSA-2408555 (Reactome)
PiArrowR-HSA-2408551 (Reactome)
PiArrowR-HSA-2408555 (Reactome)
PiArrowR-HSA-5333615 (Reactome)
PiArrowR-HSA-8959510 (Reactome)
R-HSA-2408500 (Reactome) Gluthathioselenol (GSSeH) and reduced glutathione (GSH) condense to form hydrogen selenide (H2Se) and glutathione disulfide (GSSG). This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408507 (Reactome) L-seryl-tRNA(Sec) kinase (PSTK) phosphorylates the serylated transfer RNA (tRNA) for Sec (Ser-tRNASec) to form Sep-tRNASec in the presence of ATP and Mg2+. PSTK exhibits a strict selectivity for Ser-tRNASec. It does not phosphorylate free Ser or Ser attached to its cognate tRNASer. This reaction involving PSTK is inferred from the equivalent reaction in mouse.
R-HSA-2408509 (Reactome) The final product, selenocysteinyl transfer RNA (tRNA) for Sec (Sec-tRNASec) binds to selenocysteine-specific elongation factor (EEFSEC) aka SelB complexed with GTP. This complex is now ready to be delivered to the 80S ribosome. This reaction is inferred from the equivalent reaction in mouse.
R-HSA-2408524 (Reactome) Selenocysteine lyase (SCLY) homodimer is involved in the reduction of selenocysteine (Sec) to hydrogen selenide (H2Se) and alanine (Ala) (Daher and Van Lente 1992).
R-HSA-2408525 (Reactome) Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthases 1 and 2 (PAPSS1,2) (Venkatachalam et al. 1998, Xu et al. 2000) are involved in transforming adenosine triphosphate (ATP) and selenic acid (H2SeO4) into adenylylselenate (APSe) and diphosphate via its ATP sulphurylase domain. This reaction is inferred from the event in rat (Yu et al. 1989).
R-HSA-2408526 (Reactome) The synthetic cycle of selenocysteine (Sec) synthesis starts with misacylation (serylation) of the cognate transfer RNA (tRNA) for Sec, tRNASec, with serine (Ser) by Serine--tRNA ligase (SARS) homodimer. The structural homology of tRNASec and tRNASer enables SARS to form Ser-tRNASec (Vincent et al. 1997, Amberg et al. 1996, Heckl et al. 1998).
R-HSA-2408529 (Reactome) The complex consisting of selenocysteinyl (Sec) transfer RNA (tRNA) for Sec (Sec-tRNASec), selenocysteine-specific elongation factor (EEFSEC) aka SelB, selenocysteine insertion sequence-binding protein 2 (SECISBP2) aka SBP2 and GTP interacts with the 80S ribosomal protein complex (80S:Met-tRNAi:mRNA). This reaction is inferred from events occurring in rats.
R-HSA-2408530 (Reactome) A yet to be identified enzyme with methylselenol demethylase (MSDM) activity is involved in the hydrolysis of methylselenol aka methaneselenol (MeSeH) into hydrogen selenide (H2Se) and methanol. This reaction is inferred from the event in rat (Suzuki et al. 2007, Ohta and Suzuki 2008).
R-HSA-2408532 (Reactome) Adenosylhomocysteinase (AHCY) is involved in the hydrolysis of adenosylselenohomocysteine (AdeSeHCys) into adenosine and selenohomocysteine (SeHCys). This reaction is inferred from the event in rat involving the protein adenosylhomocysteinase (Ahcy) (Kajander et al. 1991, Kajander and Raina 1981).
R-HSA-2408536 (Reactome) A yet to be identified enzyme with hydrogen selenide methyltransferase (HSeMT) activity is involved in the methylation of hydrogen selenide (H2Se) into methylselenol aka methaneselenol (MeSeH) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in rat (Ohta and Suzuki 2008, Hsieh and Ganther 1977).
R-HSA-2408537 (Reactome) Excess selenomethionine (SeMet) undergoes an alpha,gamma-elimination reaction by cystathionine gamma-lyase (CTH) to produce methylselenol aka methaneselenol (MeSeH), ammonia, and 2-oxobutanoic acid. This reaction is inferred from the event in mouse involving the protein cystathionine gamma-lyase (Cth) (Okuno et al. 2001, Okuno et al. 2005, Okuno et al. 2006).
R-HSA-2408539 (Reactome) Methylselenocysteine (MeSec) undergoes an alpha,gamma-elimination reaction by cystathionine gamma-lyase (CTH) to produce methylselenol aka methaneselenol (MeSeH), ammonia, and pyruvic acid. This reaction is inferred from the event in rat involving the protein cystathionine gamma-lyase (Cth) (Pinto et al. 2011, Suzuki et al. 2007).
R-HSA-2408540 (Reactome) Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthases 1 and 2 (PAPSS1,2) (Venkatachalam et al. 1998, Xu et al. 2000) are involved in phosphorylating adenylylselenate (APSe) into 3'-phosphoadenylyl selenate (PAPSe) via its APS kinase domain. This reaction is inferred from the event in Penicillium chrysogenum involving APS kinase (Kaps) (Yu et al. 1989).
R-HSA-2408541 (Reactome) A yet to be identified enzyme with methylselenol methyltransferase (MeSeHMT) activity is involved in the methylation of methylselenol aka methaneselenol (MeSeH) into dimethyl selenide (Me2Se) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in rat (Ohta and Suzuki 2008, Hsieh and Ganther 1977).
R-HSA-2408542 (Reactome) Glutathione reductase (GSR) homodimer is involved in the reduction of selenodiglutathione (GSSeSG) into gluthathioselenol (GSSeH) and reduced glutathione (GSH). This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408543 (Reactome) Cystathionine gamma-lyase (CTH) homotetramer is involved in the hydrolysis of selenocystathionine (SeCysta) into selenocysteine (Sec), ammonia and 2-oxobutanoic acid by an alpha,gamma-elimination reaction. This reaction is inferred from the event in rat involving the protein cystathionine gamma-lyase (Cth) homotetramer (Esaki et al. 1981).
R-HSA-2408544 (Reactome) A set of methyltransferases (MetTrans(1)) consisting of the proteins histamine-N-methyltransferase (HNMT), glycine-N-methyltransferase (GNMT), and nicotinamide-N-methyltransferase (NNMT) remove a methyl group from adenosylselenomethionine (AdoSeMet) to leave adenosylselenohomocysteine (AdeSeHCys). This reaction is inferred from the event in rat involving the set of methyltransferases (MetTrans(2)) consisting of the proteins histamine-N-methyltransferase (Hnmt), glycine-N-methyltransferase (Gnmt), and nicotinamide-N-methyltransferase (Nnmt) (Kajander et al. 1991).
R-HSA-2408546 (Reactome) As a first step in the incorporation of selenomethionine into proteins, tRNA(Met) is converted into selenomethionyl-tRNA(Met) (SeMet-tRNA(Met)) by methionine-tRNA ligase (MARS) component of a multisynthetase complex comprised of a bifunctional glutamyl-prolyl-tRNA synthetase, the monospecific isoleucyl, leucyl, glutaminyl, methionyl, lysyl, arginyl, and aspartyl-tRNA synthetases as well as three auxiliary proteins, p18, p48 and p43. It is involved in the selenomethionylation of tRNA(Met) into selenomethionyl-tRNA(Met) (SeMet-tRNA(Met)). This reaction is inferred from the event in mung bean (Burnell 1981) and in wheat germ (Eustice et al. 1981).
R-HSA-2408548 (Reactome) A yet to be identified enzyme with 3'-phosphoadenylyl selenate reductase (PAPSeR) activity is involved in the reduction of 3'-phosphoadenylyl selenate (PAPSe) into selenite (SeO3(2-)) and adenosine 3',5'-bismonophosphate (PAP). This reaction is inferred from the event in yeast (Banszky et al. 2003).
R-HSA-2408551 (Reactome) Methionine adenosyltransferases (MAT multimers) consisting of a S-adenosylmethionine synthase isoform type-1 (MAT1A) homodimer and a MAT1A: S-adenosylmethionine synthase isoform type-2 (MAT2A) heterodimer are responsible for the conversion of selenomethionine (SeMet) and ATP into Se-adenosylselenomethionine (AdoSeMet), orthophosphate (Pi), and diphosphate (PPi) (Kajander et al. 1990).
R-HSA-2408554 (Reactome) Indolethylamine N-methyltransferase (INMT) is involved in the methylation of dimethyl selenide (Me2Se) into trimethylselenonium (Me3Se+) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in mouse (Mozier et al. 1988).
R-HSA-2408555 (Reactome) O-phosphoseryl-tRNA(Sec) selenium transferase (SEPSECS) tetramer catalyses the transformation of phosphoserine (Sep) into selenocysteine (Sec) by using selenophosphate (SELP) as a selenium donor to convert the phosphoserylated transfer RNA (tRNA) for Sec (Sep-tRNASec) into Sec-tRNASec (Palioura et al. 2009, Yuan et al. 2006).
R-HSA-2408556 (Reactome) Selenite (SeO3(2-)) and reduced glutathione (GSH) spontaneously react to form selenodiglutathione (GSSeSG) and glutathione disulfide (GSSG). This has been proposed to be the major form of entry of selenium compounds into metabolism. This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408558 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer (Sun et al. 1999) is involved in the reduction of selenite (SeO3(2-)) into hydrogen selenide (H2Se). This reaction is inferred from the event in cow (Kumar et al. 1992).
R-HSA-2408559 (Reactome) Cystathionine beta-synthase (CBS) is involved in the dehydration of selenohomocysteine (SeHCys) and serine that produces selenocystathionine (SeCysta). This reaction is inferred from the event in rat involving the protein cystathionine beta-synthase (Cbs) (Esaki et al. 1981).
R-HSA-5263614 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer is involved in the reduction of methylselenenic acid (MeSeOH) into methylselenol (MeSeH) (Gromer and Gross 2002).
R-HSA-5263616 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer is involved in the reduction of methylseleninic acid (MeSeO2H) into methylselenenic acid (MeSeOH) (Gromer and Gross 2002).
R-HSA-5333607 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (bGalNAc ) derivative combines with glutathioselenol (GSSeH) to form 1beta-glutathionylseleno-N-acetyl-D-galactosamine (GSSebGalNac) aka selenosugar A by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Kobayashi et al. 2002).
R-HSA-5333608 (Reactome) 1beta-glutathionylseleno-N-acetyl-D-galactosamine (GSSebGalNac) aka selenosugar A is converted into 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Kobayashi et al. 2002).
R-HSA-5333609 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B is hydrolysed to methylselenol (MeSeH) and N-acetyl-beta-D-galactosamine (bGalNac) by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Suzuki et al. 2006).
R-HSA-5333612 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B is oxidatively cleaved to methylseleninic acid (MeSeO2H) and 2-acetamidoglucal by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Suzuki et al. 2006).
R-HSA-5333615 (Reactome) The complex consisting of selenocysteinyl (Sec) transfer RNA (tRNA) for Sec (Sec-tRNASec), selenocysteine-specific elongation factor (EEFSEC) aka SelB, selenocysteine insertion sequence-binding protein 2 (SECISBP2) aka SBP2 and GTP interacts with the 80S ribosomal protein complex (80S:Met-tRNAi:mRNA). This triggers the hydrolysis of GTP (to GDP) by EEFSEC and delivery of Sec-tRNASec to the ribosomal A site. Before the Sec residue is inserted into the nascent polypeptide chain, EEFSEC:GDP is released. This reaction is inferred from events occurring in rats.
R-HSA-8959510 (Reactome) Selenoproteins are proteins that incorporate the nonstandard amino acid selenocysteine (Sec) in response to the UGA codon. Sec is synthesised in several steps from hydrogen selenide (H2Se), an intermediate formed from dietary sources of selenium. In the first step, cytosolic selenide water dikinase 2 (SEPHS2 aka SPS2) mediates the phosphorylation of H2Se using ATP as the phosphate donor, forming selenophosphate (SELP) (Tamura et al. 2004).
SARS dimermim-catalysisR-HSA-2408526 (Reactome)
SECISBP2R-HSA-2408529 (Reactome)
SELPArrowR-HSA-8959510 (Reactome)
SELPR-HSA-2408555 (Reactome)
SEPHS2mim-catalysisR-HSA-8959510 (Reactome)
SeCystaArrowR-HSA-2408559 (Reactome)
SeCystaR-HSA-2408543 (Reactome)
SeHCysArrowR-HSA-2408532 (Reactome)
SeHCysR-HSA-2408559 (Reactome)
SeMet-tRNA(Met)ArrowR-HSA-2408546 (Reactome)
SeMetR-HSA-2408537 (Reactome)
SeMetR-HSA-2408546 (Reactome)
SeMetR-HSA-2408551 (Reactome)
SeO3(2-)ArrowR-HSA-2408548 (Reactome)
SeO3(2-)R-HSA-2408556 (Reactome)
SeO3(2-)R-HSA-2408558 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPArrowR-HSA-2408509 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPR-HSA-2408529 (Reactome)
Sec-tRNA(Sec)ArrowR-HSA-2408555 (Reactome)
Sec-tRNA(Sec)R-HSA-2408509 (Reactome)
SecArrowR-HSA-2408543 (Reactome)
SecR-HSA-2408524 (Reactome)
Sep-tRNA(Sec)ArrowR-HSA-2408507 (Reactome)
Sep-tRNA(Sec)R-HSA-2408555 (Reactome)
Ser-tRNA(Sec)ArrowR-HSA-2408526 (Reactome)
Ser-tRNA(Sec)R-HSA-2408507 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-2408558 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-5263614 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-5263616 (Reactome)
acceptorArrowR-HSA-2408524 (Reactome)
aminoacyl-tRNA

synthetase

multienzyme complex
mim-catalysisR-HSA-2408546 (Reactome)
bGalNAc derivativeR-HSA-5333607 (Reactome)
bGalNAcArrowR-HSA-5333609 (Reactome)
pyruvic acidArrowR-HSA-2408539 (Reactome)
reduced acceptorR-HSA-2408524 (Reactome)
tRNA(Met)R-HSA-2408546 (Reactome)
tRNA(Sec)ArrowR-HSA-5333615 (Reactome)
tRNA(Sec)R-HSA-2408526 (Reactome)
Personal tools