De novo biosynthesis of pyrimidine ribonucleotides (Saccharomyces cerevisiae)

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carbamoyl-L-aspartatedihydroorotateH+orotidine-5’-phosphateUTPCTPUMPH2OacceptorUDPHCO3-L-aspartateCO2H2OH2Ocarbomoyl-phosphatereduced acceptororotateURA10CDPADPATPURA4YNK12 ADPphosphateL-glutamateL-glutamateURA1URA5L-glutaminepyrophosphateURA6ATPURA3ADPPRPPADPL-glutamineURA7ATPATPURA2ADPphosphateURA8phosphateURA22 ATP


Description

No description

Comments

GenMAPP remarks 
Based on http://pathway.yeastgenome.org/biocyc/

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Quality Tags

Ontology Terms

 

Bibliography

  1. Wagner R, de Montigny J, de Wergifosse P, Souciet JL, Potier S; ''The ORF YBL042 of Saccharomyces cerevisiae encodes a uridine permease.''; FEMS Microbiol Lett, 1998 PubMed Europe PMC Scholia
  2. ''de novo biosynthesis of pyrimidine ribonucleotides''; YeastPathways,

History

View all...
CompareRevisionActionTimeUserComment
135756view12:01, 9 November 2024EgonwNormalized a EC identifier
135633view04:22, 8 October 2024Khanspersboard size
135632view04:21, 8 October 2024Khanspersupdated reference
135631view04:19, 8 October 2024Khanspersoverhaul
135621view21:49, 7 October 2024KhanspersOntology Term : 'classic metabolic pathway' added !
135620view21:44, 7 October 2024Khanspersremoved GenMAPP comments
135619view21:42, 7 October 2024KhanspersModified description
117290view11:02, 20 May 2021EweitzModified title
107032view13:48, 17 September 2019MaintBotHMDB identifier normalization
102792view13:45, 24 January 2019EgonwBetter PubChem ID.
87230view14:47, 19 July 2016SusanOntology Term : 'de novo pyrimidine biosynthetic pathway' added !
87229view14:47, 19 July 2016SusanOntology Term : 'PW:0000861' removed !
87226view14:44, 19 July 2016SusanOntology Term : 'pyrimidine biosynthetic pathway' added !
71184view15:09, 11 October 2013EgonwFixed a metabolite label and added its identifier.
71183view15:01, 11 October 2013EgonwAdded missing metabolite identifiers.
71182view14:48, 11 October 2013EgonwPeriodical save, work in progress
70996view15:30, 22 September 2013EgonwAdded metabolite identifiers.
70248view21:36, 15 July 2013MaintBotupdated to 2013 schema
70053view06:01, 12 July 2013EgonwMarked a few DataNodes with CAS registry numbers as metabolites.
69729view08:03, 11 July 2013EgonwGive water HMDB ids.
54773view07:18, 9 December 2012EgonwReplaced multiple general nodes by Metabolite DataNode's.
54772view07:14, 9 December 2012EgonwConnecting dots
41915view04:54, 2 March 2011MaintBotRemoved redundant pathway information and comments
36648view22:38, 9 April 2010MaintBotDescription and bibliography added from SGD
20875view11:30, 14 November 2008MaintBot[[Pathway:Saccharomyces cerevisiae:De Novo Biosynthesis of Pyrimidine Ribonucleotides]] moved to [[Pathway:WP92]]: Moved to stable identifier
12686view07:58, 17 May 2008MaintBotautomated metabolite conversion
8690view14:06, 7 January 2008MaintBotAdded to category $category
8688view14:06, 7 January 2008M.BraymerUploaded new pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
2 ADP58-64-0 (CAS)
2 ATP1927-31-7 (CAS)
ADP58-64-0 (CAS)
ATP1927-31-7 (CAS)
CDP63-38-7 (CAS)
L-glutamate56-86-0 (CAS)
L-glutamine56-85-9 (CAS)
PRPP97-55-2 (CAS)
URA10GeneProductS000004884 (SGD)
URA1GeneProductS000001699 (SGD)
URA2GeneProductS000003666 (SGD)
URA3GeneProductS000000747 (SGD)
URA4GeneProductS000004412 (SGD)
URA5GeneProductS000004574 (SGD)
URA6GeneProductS000001507 (SGD)
URA7GeneProductS000000135 (SGD)
URA8GeneProductS000003864 (SGD)
YNK1GeneProductS000001550 (SGD)
phosphate14265-44-2 (CAS)
pyrophosphate2466-09-3 (CAS)

Annotated Interactions

No annotated interactions
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