Tyrosine biosynthesis (Saccharomyces cerevisiae)

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Description

Biosynthesis of the aromatic amino acids tyrosine, phenylalanine, and tryptophan proceeds via a common pathway to chorismate, at which point the pathway branches(CITS:[Jones][1943992]). One branch proceeds to tyrosine and phenylalanine, and the other to tryptophan (CITS:[Jones]). The series of reactions to chorismate, called the shikimate pathway, and the series of reactions from chorismate to tryptophan have been found to be common to all eukaryotes and prokaryotes studied thus far (as reported in (CITS:[1943992])). In contrast, there appears to be two separate routes for tyrosine and phenylalanine biosynthesis from chorismate, only one of which has been found in S. cerevisiae (CITS:[1943992]). S. cerevisiae, similar to E. coli, synthesize tyrosine and phenylalanine via the intermediate 4-hydroxyphenylpyruvate and phenylpyruvate, respectively, whereas some other organisms synthesize them via arogenate (CITS:[1943992]). Aromatic amino acid biosynthesis in S. cerevisiae is controlled by a combination of feedback inhibition, activation of enzyme activity, and regulation of enzyme synthesis (CITS:[Jones][1943992]). The carbon flow through the pathways is regulated primarily at the initial step and the branching points by the terminal end-products. The initial step of chorismate biosynthesis can be catalyzed by two isoenzymes Aro3p or Aro4p, whereby Aro3p is inhibited by phenylalanine, and Aro4p by tyrosine (CITS:[Jones][1943992]). The first step in the phenylalanine-tyrosine branch is feedback inhibited by tyrosine and activated by tryptophan, and the first step in the tryptophan branch is feedback inhibited by tryptophan (CITS:[1943992]). The transcriptional activator GCN4 regulates most of the genes encoding for the aromatic amino acid biosynthetic enzymes; however, no GCN4 regulation was found for TYR1 of the tyrosine branch, ARO7 of the tyrosine and phenylalanine branch or TRP1 of the tryptophan branch, (CITS:[1943992]). SOURCE: SGD pathways, http://pathway.yeastgenome.org/server.html

Comments

GenMAPP remarks 
Based on http://pathway.yeastgenome.org/biocyc/

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Bibliography

  1. Urrestarazu A, Vissers S, Iraqui I, Grenson M; ''Phenylalanine- and tyrosine-auxotrophic mutants of Saccharomyces cerevisiae impaired in transamination.''; Mol Gen Genet, 1998 PubMed Europe PMC Scholia
  2. Braus GH; ''Aromatic amino acid biosynthesis in the yeast Saccharomyces cerevisiae: a model system for the regulation of a eukaryotic biosynthetic pathway.''; Microbiol Rev, 1991 PubMed Europe PMC Scholia
  3. ''tyrosine biosynthesis''; YeastPathways,

History

View all...
CompareRevisionActionTimeUserComment
135665view19:31, 18 October 2024KhanspersOntology Term : 'classic metabolic pathway' added !
135664view19:31, 18 October 2024Khanspersupdated reference
135663view19:30, 18 October 2024Khanspersadded reference
135662view19:29, 18 October 2024KhanspersModified description
135661view19:20, 18 October 2024Khanspersadded branch, updated interaction type
117357view11:56, 20 May 2021EweitzModified title
96355view17:12, 9 March 2018EgonwReplaced secondary ChEBI identifiers with primary identifiers.
91898view19:29, 3 April 2017Khanspersoverhaul
89706view06:55, 27 September 2016EgonwReplace the CAS number of the salt with that of just the metabolite.
69941view20:15, 11 July 2013EgonwMarked a few DataNodes with CAS registry numbers as metabolites.
69667view20:40, 8 July 2013MaintBotUpdated to 2013 gpml schema
67734view11:56, 26 June 2013DdiglesOntology Term : 'tyrosine biosynthetic pathway' added !
41910view04:54, 2 March 2011MaintBotRemoved redundant pathway information and comments
36637view22:36, 9 April 2010MaintBotDescription and bibliography added from SGD
21812view11:32, 14 November 2008MaintBot[[Pathway:Saccharomyces cerevisiae:Tyrosine Biosynthesis]] moved to [[Pathway:WP538]]: Moved to stable identifier
12887view08:07, 17 May 2008MaintBotautomated metabolite conversion
8990view14:14, 7 January 2008MaintBotAdded to category $category
8988view14:14, 7 January 2008M.BraymerUploaded new pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
2-oxoglutarateMetaboliteCHEBI:16810 (ChEBI)
3-(4-hydroxyphenyl)pyruvate MetaboliteCHEBI:36242 (ChEBI)
ARO7GeneProductS000006264 (SGD)
ARO8GeneProductS000003170 (SGD)
ARO9GeneProductS000001179 (SGD)
CO2MetaboliteCHEBI:16526 (ChEBI)
L-GlutamateMetaboliteCHEBI:16015 (ChEBI)
L-alanineMetaboliteCHEBI:I57972 (ChEBI)
L-tyrosineMetaboliteCHEBI:17895 (ChEBI)
NADPMetaboliteCHEBI:44409 (ChEBI)
NADPHMetabolite53-57-6 (CAS)
PyruvateMetaboliteCHEBI:15361 (ChEBI)
TYR1GeneProductS000000370 (SGD)
chorismateMetaboliteCHEBI:29748 (ChEBI)
prephenateMetaboliteCHEBI:29934 (ChEBI)

Annotated Interactions

No annotated interactions
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