Photosynthetic carbon reduction (Arabidopsis thaliana)

From WikiPathways

Description

Quality Tags

Ontology Terms

Bibliography

1. Lubert Stryer; ''Biochemistry''; Book Chapter 26: Photosynthesis, 1995
2. Hankamer B, Barber J, Boekema EJ; ''STRUCTURE AND MEMBRANE ORGANIZATION OF PHOTOSYSTEM II IN GREEN PLANTS.''; Annu Rev Plant Physiol Plant Mol Biol, 1997 PubMed Europe PMC Scholia

History

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Compare	Revision	Action	Time	User	Comment
	126352	view	09:33, 23 April 2023	Egonw	License is CCZero
	118333	view	13:09, 27 May 2021	Mkutmon	fixed publication ref
	117247	view	09:59, 19 May 2021	Eweitz	Modified title
	107040	view	14:08, 17 September 2019	MaintBot	ChEBI identifier normalization
	105895	view	11:31, 16 August 2019	Mkutmon	HMDB identifier normalization
	88319	view	15:38, 1 August 2016	Fehrhart	Ontology Term : 'photosynthesis pathway' added !
	79803	view	16:23, 16 April 2015	Mkutmon	fixed unconnected line
	71233	view	09:56, 16 October 2013	Egonw	Added the 'Gramene Arabidopsis' for AT*-TAIR-G identifiers.
	71004	view	16:16, 22 September 2013	Egonw	Added a few identifiers, and cleaned up the oxygen/CO2 reactions to be more separate.
	68453	view	19:37, 5 July 2013	MaintBot	Updated to 2013 gpml schema
	48305	view	04:20, 18 May 2012	Khanspers	Updating PubChem xref
	48175	view	22:58, 9 May 2012	MaintBot	Automatic update of PubChem xrefs
	40485	view	19:12, 1 March 2011	MaintBot	Removed redundant pathway information and comments
	38024	view	17:45, 30 July 2010	MartijnVanIersel	Rubisco complex
	37661	view	12:15, 18 June 2010	MartijnVanIersel	updated plasto*
	37660	view	12:00, 18 June 2010	MartijnVanIersel	added some proteins of PSII
	37659	view	11:51, 18 June 2010	MartijnVanIersel	Periodical save, work in progress
	37658	view	11:39, 18 June 2010	MartijnVanIersel	light reactions further specified
	37218	view	21:30, 21 May 2010	Khanspers	Modified categories
	36800	view	14:11, 4 May 2010	MartijnVanIersel	Rubisco side-reaction and sucrose synthesis
	34945	view	12:59, 5 February 2010	MartijnVanIersel	added missing id
	34944	view	12:58, 5 February 2010	MartijnVanIersel	added some missing database ids
	34943	view	12:53, 5 February 2010	MartijnVanIersel	Modified categories
	34942	view	12:52, 5 February 2010	MartijnVanIersel	New pathway

External references

DataNodes

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Name	Type	Database reference	Comment
3-PGA	Metabolite	HMDB00807 (HMDB)
ADP	Metabolite	HMDB01341 (HMDB)
ATP Synthase	GeneProduct
ATPGLP1	GeneProduct	AT5G36700 (TAIR)
ATP	Metabolite	HMDB01532 (HMDB)
ATPPT2	GeneProduct	AT3G01550 (TAIR)
CAB1	GeneProduct	AT1G29930-TAIR-G (Gramene Arabidopsis)
CAB2	GeneProduct	AT1G29920-TAIR-G (Gramene Arabidopsis)
CAB3	GeneProduct	AT1G29910-TAIR-G (Gramene Arabidopsis)
CO2	Metabolite	HMDB01967 (HMDB)
Ferredoxin	GeneProduct
Ferredoxin-NADP reductase	GeneProduct
Fructose 6P	Metabolite	HMDB00124 (HMDB)
Glucose-UDP	Metabolite
Glycolate	Metabolite	HMDB00115 (HMDB)
H+	Metabolite
LHB1B1	GeneProduct	AT2G34430-TAIR-G (Gramene Arabidopsis)
LHB1B2	GeneProduct	AT2G34420-TAIR-G (Gramene Arabidopsis)
NADPH	Metabolite	HMDB00221 (HMDB)
NADP	Metabolite	HMDB00217 (HMDB)
O2	Metabolite	HMDB01377 (HMDB)
P-glycolate	Metabolite	HMDB00816 (HMDB)
P700	GeneProduct
Plastocyanin	GeneProduct
Plastoquinone	Metabolite	6433402 (PubChem-substance)
RCA	GeneProduct	AT2G39730-TAIR-G (Gramene Arabidopsis)
RbS1Ac	GeneProduct	AT1G67090-TAIR-G
RbcL	GeneProduct
RbcS1B	GeneProduct	AT5G38430-TAIR-G
RbcS2B	GeneProduct	AT5G38420-TAIR-G
RbcS3B	GeneProduct	AT5G38410-TAIR-G
RuBP	Metabolite	16710 (ChEBI)
Rubisco	GeneProduct	AT2G07732-TAIR-G
Sucrose	Metabolite	HMDB00258 (HMDB)
Triose-P	Metabolite
glycoxylate	Metabolite

Annotated Interactions

No annotated interactions