Interferon gamma signaling (Homo sapiens)

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10, 14, 18, 243, 4, 13, 29-31, 396, 41, 472, 32, 3825, 35192, 19, 26, 3744, 467, 12, 20, 434, 17, 23, 4227, 409, 111, 8, 285, 15, 21, 22, 34...8, 28, 33IFNG-activated factor IFNGIFNGR1p-JAK1IFNGR2p-JAK2 IFNG-activated factor IFNG-activated factor STAT1 bound to p-IFNGR1 IFNGR1JAK1INFG2JAK2 IFNGIFNGR1JAK1IFNGR2p-JAK2 IFNGR2p-JAK2 IFNGR2p-JAK2 IFNGR2p-JAK2 p-STAT1 dimerPIASSUMO1 IFNGR1JAK1 IFNGp-IFNGR1p-JAK1IFNGR2p-JAK2 IFNG homodimer IFNGp-IFNGR1p-JAK1IFNGR2p-JAK2 IFNGR1p-JAK1 IFNGIFNGR1JAK1IFNGR2JAK2 IFNG homodimer IFNGR2p-JAK2 IFNGR2JAK2 IFNG homodimer IFNGR1JAK1 endoplasmic reticulum lumenGAF bound to GAS promoter element IFNG homodimer cytosolIFNGR complex with p-JAK p-STAT1 homodimer IFNGIFNGR1JAK1IFNGR2p-JAK2SOCS-1/-3 IFNGR complex with p-JAK2 IFNG homodimer IFNGR2p-JAK2 p-IFNGR1pJAK1IFNGR2p-JAK2 p-IFNGR1p-JAK1 p-STAT1p-IFNGR1p-JAK1 IFNG-activated factor IFNGR1JAK1 SOCS-1 and SOCS-3 IFNG homodimer IFNG homodimer IFNG homodimer p-IFNGR1pJAK1IFNGR2p-JAK2 p-STAT1 dimer bound to p-IFNGR1 p-IFNGR1p-JAK1 lysosomal lumenIFNG homodimer IFNGR complex with p-JAK2 p-IFNGR1pJAK1IFNGR2p-JAK2 IFNG-activated factor p-IFNGR1p-JAK1 nucleoplasmIFNGp-IFNGR1p-JAK1IFNGR2p-JAK2 IFNGR2p-JAK2 HLA II alpha chain IFNGR1JAK1 HLA II beta chain IFNGp-IFNGR1p-JAK1IFNGR2p-JAK2 IFNGR1JAK1INFG2JAK2 IFNGR2JAK2 MHC class II alpha/beta dimer IFNGIFNGR1JAK1IFNGR2p-JAK2 IFNGR2p-JAK2 p-IFNGR1pJAK1IFNGR2p-JAK2 SOCS3 HLA class II histocompatibility antigen, DRB1-1 beta chain HLA class II histocompatibility antigen, DP alpha chain precursor Pip-Y-JAK1 IFNGR1JAK1INFG2JAK2JAK2 HLA class II histocompatibility antigen, DQ ADPIRF 1-9IFNGR1 PTPN2-1IFNGIFNGR1JAK1IFNGR2JAK2IFNG homodimerHLA class II histocompatibility antigen, DRB1-14 beta chain IFNGR1 IFNGR2 IFNGR1 SUMO1 GAS promoter region in IFNG-regulated genesPTPs-SHP1/2/PTP1BIFNG PIAS1 p-Y1007-JAK2 p-Y-JAK1 MT2AMHC class II alpha/beta dimerPip-STAT1 dimer bound to p-IFNGR1PIAS1IFNGR2 IFNGIFNGR1p-JAK1IFNGR2p-JAK2p-Y1007-JAK2 FCGRAHLA class II histocompatibility antigen, DRB1-16 beta chain B2MADPGBPPTPN6IFNGR2 ATPp-Y1007-JAK2 IFN-gamma upregulated CAMsCIITAATPIFNGR1 HLA class II histocompatibility antigen, DR beta 5 chain p-Y440-IFNGR1 PTPN1HLA class II histocompatibility antigen, DQB1*0602 beta chain precursor STAT1-1p-Y1007-JAK2 IFNG IFNGR2 OAS proteinsp-Y1007-JAK2 HLA class II histocompatibility antigen, DR alpha chain precursor HLA class II histocompatibility antigen, DRB1-13 beta chain ATPADPIFNGR2 H2OIFI30p-Y440-IFNGR1 HLA class II histocompatibility antigen, DRB1-12 beta chain IFNGR1 p-Y701-STAT1-1 p-Y-JAK1 PMLCaMKII and PKC-deltaHLA class II histocompatibility antigen, DRB1-7 beta chain ATPIFNG STAT1-1 IFNG SUMO1JAK1 GAF bound to GAS promoter elementp-Y-JAK1 HLA class II histocompatibility antigen, DQ H2OSOCS1 ADPp-S727,Y701-STAT1-1 IFNGR2 p-S727,Y701-STAT1-1 IFNG ADPHLA class II histocompatibility antigen, DRB1-11 beta chain p-STAT1 dimerPIASSUMO1HLA class II histocompatibility antigen, DR-1 beta chain precursor IFNGR2 p-Y440-IFNGR1 HLA class II histocompatibility antigen, DRB3-1 beta chain precursor JAK2 STAT1-1JAK1 IFNG p-Y1007-JAK2 p-STAT1HLA class II histocompatibility antigen, DP PTAFRHLA class II histocompatibility antigen, DRB1-15 beta chain IFNGIFNGR1JAK1IFNGR2p-JAK2SOCS-1/-3IFNG-activated factor ATPp-Y1007-JAK2 p-S727,Y701-STAT1-1 SOCS-1 and SOCS-3HLA class II histocompatibility antigen, DRB1-8 beta chain IFNGR2 IFNG p-S727,Y701-STAT1-1 HLA class II histocompatibility antigen, DRB1-10 beta chain JAK1 IFNGR2 IFNG-activated factor STAT1 bound to p-IFNGR1IFNG JAK1 HLA class II histocompatibility antigen, DR beta 4 chain SP100HLA class II histocompatibility antigen, DRB1-4 beta chain p-Y-JAK1 IFNGp-IFNGR1p-JAK1IFNGR2p-JAK2HLA class II histocompatibility antigen, DRB1-9 beta chain precursor IFNGIFNGR1JAK1IFNGR2p-JAK2Class I MHC heavy chain HLA class II histocompatibility antigen, DQ p-S727,Y701-STAT1-1 p-Y440-IFNGR1 IFNG HLA class II histocompatibility antigen, DQ beta 2 chain 30, 39165, 34


Description

Interferon-gamma (IFN-gamma) belongs to the type II interferon family and is secreted by activated immune cells-primarily T and NK cells, but also B-cells and APC. INFG exerts its effect on cells by interacting with the specific IFN-gamma receptor (IFNGR). IFNGR consists of two chains, namely IFNGR1 (also known as the IFNGR alpha chain) and IFNGR2 (also known as the IFNGR beta chain). IFNGR1 is the ligand binding receptor and is required but not sufficient for signal transduction, whereas IFNGR2 do not bind IFNG independently but mainly plays a role in IFNG signaling and is generally the limiting factor in IFNG responsiveness. Both IFNGR chains lack intrinsic kinase/phosphatase activity and thus rely on other signaling proteins like Janus-activated kinase 1 (JAK1), JAK2 and Signal transducer and activator of transcription 1 (STAT-1) for signal transduction. IFNGR complex in its resting state is a preformed tetramer and upon IFNG association undergoes a conformational change. This conformational change induces the phosphorylation and activation of JAK1, JAK2, and STAT1 which in turn induces genes containing the gamma-interferon activation sequence (GAS) in the promoter. Original Pathway at Reactome: http://www.reactome.org/PathwayBrowser/#DB=gk_current&FOCUS_SPECIES_ID=48887&FOCUS_PATHWAY_ID=877300

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Bibliography

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  1. Kotenko SV, Izotova LS, Pollack BP, Mariano TM, Donnelly RJ, Muthukumaran G, Cook JR, Garotta G, Silvennoinen O, Ihle JN.; ''Interaction between the components of the interferon gamma receptor complex.''; PubMed Europe PMC Scholia
  2. ten Hoeve J, de Jesus Ibarra-Sanchez M, Fu Y, Zhu W, Tremblay M, David M, Shuai K.; ''Identification of a nuclear Stat1 protein tyrosine phosphatase.''; PubMed Europe PMC Scholia
  3. Martinez FO, Gordon S, Locati M, Mantovani A.; ''Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression.''; PubMed Europe PMC Scholia
  4. Briscoe J, Rogers NC, Witthuhn BA, Watling D, Harpur AG, Wilks AF, Stark GR, Ihle JN, Kerr IM.; ''Kinase-negative mutants of JAK1 can sustain interferon-gamma-inducible gene expression but not an antiviral state.''; PubMed Europe PMC Scholia
  5. Aaronson DS, Horvath CM.; ''A road map for those who don't know JAK-STAT.''; PubMed Europe PMC Scholia
  6. Feng J, Witthuhn BA, Matsuda T, Kohlhuber F, Kerr IM, Ihle JN.; ''Activation of Jak2 catalytic activity requires phosphorylation of Y1007 in the kinase activation loop.''; PubMed Europe PMC Scholia
  7. Mowen K, David M.; ''Regulation of STAT1 nuclear export by Jak1.''; PubMed Europe PMC Scholia
  8. Costa-Pereira AP, Hermanns HM, Is'harc H, Williams TM, Watling D, Arulampalam V, Newman SJ, Heinrich PC, Kerr IM.; ''Signaling through a mutant IFN-gamma receptor.''; PubMed Europe PMC Scholia
  9. Pestka S, Kotenko SV, Muthukumaran G, Izotova LS, Cook JR, Garotta G.; ''The interferon gamma (IFN-gamma) receptor: a paradigm for the multichain cytokine receptor.''; PubMed Europe PMC Scholia
  10. Strehlow I, Decker T.; ''Transcriptional induction of IFN-gamma-responsive genes is modulated by DNA surrounding the interferon stimulation response element.''; PubMed Europe PMC Scholia
  11. McBride KM, Reich NC.; ''The ins and outs of STAT1 nuclear transport.''; PubMed Europe PMC Scholia
  12. Krause CD, Mei E, Xie J, Jia Y, Bopp MA, Hochstrasser RM, Pestka S.; ''Seeing the light: preassembly and ligand-induced changes of the interferon gamma receptor complex in cells.''; PubMed Europe PMC Scholia
  13. Krause CD, Lavnikova N, Xie J, Mei E, Mirochnitchenko OV, Jia Y, Hochstrasser RM, Pestka S.; ''Preassembly and ligand-induced restructuring of the chains of the IFN-gamma receptor complex: the roles of Jak kinases, Stat1 and the receptor chains.''; PubMed Europe PMC Scholia
  14. Simoncic PD, Lee-Loy A, Barber DL, Tremblay ML, McGlade CJ.; ''The T cell protein tyrosine phosphatase is a negative regulator of janus family kinases 1 and 3.''; PubMed Europe PMC Scholia
  15. Bach EA, Aguet M, Schreiber RD.; ''The IFN gamma receptor: a paradigm for cytokine receptor signaling.''; PubMed Europe PMC Scholia
  16. Ouellet S, Müller E, Rola-Pleszczynski M.; ''IFN-gamma up-regulates platelet-activating factor receptor gene expression in human monocytes.''; PubMed Europe PMC Scholia
  17. Ealick SE, Cook WJ, Vijay-Kumar S, Carson M, Nagabhushan TL, Trotta PP, Bugg CE.; ''Three-dimensional structure of recombinant human interferon-gamma.''; PubMed Europe PMC Scholia
  18. Walter MR, Windsor WT, Nagabhushan TL, Lundell DJ, Lunn CA, Zauodny PJ, Narula SK.; ''Crystal structure of a complex between interferon-gamma and its soluble high-affinity receptor.''; PubMed Europe PMC Scholia
  19. Shuai K, Horvath CM, Huang LH, Qureshi SA, Cowburn D, Darnell JE.; ''Interferon activation of the transcription factor Stat91 involves dimerization through SH2-phosphotyrosyl peptide interactions.''; PubMed Europe PMC Scholia
  20. Stratowa C, Audette M.; ''Transcriptional regulation of the human intercellular adhesion molecule-1 gene: a short overview.''; PubMed Europe PMC Scholia
  21. Ungureanu D, Vanhatupa S, Kotaja N, Yang J, Aittomaki S, Jänne OA, Palvimo JJ, Silvennoinen O.; ''PIAS proteins promote SUMO-1 conjugation to STAT1.''; PubMed Europe PMC Scholia
  22. Rosenman SJ, Shrikant P, Dubb L, Benveniste EN, Ransohoff RM.; ''Cytokine-induced expression of vascular cell adhesion molecule-1 (VCAM-1) by astrocytes and astrocytoma cell lines.''; PubMed Europe PMC Scholia
  23. Matsuda T, Feng J, Witthuhn BA, Sekine Y, Ihle JN.; ''Determination of the transphosphorylation sites of Jak2 kinase.''; PubMed Europe PMC Scholia
  24. Sakatsume M, Igarashi K, Winestock KD, Garotta G, Larner AC, Finbloom DS.; ''The Jak kinases differentially associate with the alpha and beta (accessory factor) chains of the interferon gamma receptor to form a functional receptor unit capable of activating STAT transcription factors.''; PubMed Europe PMC Scholia
  25. Nair JS, DaFonseca CJ, Tjernberg A, Sun W, Darnell JE, Chait BT, Zhang JJ.; ''Requirement of Ca2+ and CaMKII for Stat1 Ser-727 phosphorylation in response to IFN-gamma.''; PubMed Europe PMC Scholia
  26. Huang F, Xiao H, Sun BL, Yang RG.; ''Characterization of TRIM62 as a RING finger E3 ubiquitin ligase and its subcellular localization.''; PubMed Europe PMC Scholia
  27. Gough DJ, Levy DE, Johnstone RW, Clarke CJ.; ''IFNgamma signaling-does it mean JAK-STAT?''; PubMed Europe PMC Scholia
  28. Shuai K, Stark GR, Kerr IM, Darnell JE.; ''A single phosphotyrosine residue of Stat91 required for gene activation by interferon-gamma.''; PubMed Europe PMC Scholia
  29. Wenta N, Strauss H, Meyer S, Vinkemeier U.; ''Tyrosine phosphorylation regulates the partitioning of STAT1 between different dimer conformations.''; PubMed Europe PMC Scholia
  30. Quintás-Cardama A, Vaddi K, Liu P, Manshouri T, Li J, Scherle PA, Caulder E, Wen X, Li Y, Waeltz P, Rupar M, Burn T, Lo Y, Kelley J, Covington M, Shepard S, Rodgers JD, Haley P, Kantarjian H, Fridman JS, Verstovsek S.; ''Preclinical characterization of the selective JAK1/2 inhibitor INCB018424: therapeutic implications for the treatment of myeloproliferative neoplasms.''; PubMed Europe PMC Scholia
  31. Thiel DJ, le Du MH, Walter RL, D'Arcy A, Chène C, Fountoulakis M, Garotta G, Winkler FK, Ealick SE.; ''Observation of an unexpected third receptor molecule in the crystal structure of human interferon-gamma receptor complex.''; PubMed Europe PMC Scholia
  32. Fountoulakis M, Zulauf M, Lustig A, Garotta G.; ''Stoichiometry of interaction between interferon gamma and its receptor.''; PubMed Europe PMC Scholia
  33. Fridman JS, Scherle PA, Collins R, Burn TC, Li Y, Li J, Covington MB, Thomas B, Collier P, Favata MF, Wen X, Shi J, McGee R, Haley PJ, Shepard S, Rodgers JD, Yeleswaram S, Hollis G, Newton RC, Metcalf B, Friedman SM, Vaddi K.; ''Selective inhibition of JAK1 and JAK2 is efficacious in rodent models of arthritis: preclinical characterization of INCB028050.''; PubMed Europe PMC Scholia
  34. Hanan EJ, van Abbema A, Barrett K, Blair WS, Blaney J, Chang C, Eigenbrot C, Flynn S, Gibbons P, Hurley CA, Kenny JR, Kulagowski J, Lee L, Magnuson SR, Morris C, Murray J, Pastor RM, Rawson T, Siu M, Ultsch M, Zhou A, Sampath D, Lyssikatos JP.; ''Discovery of potent and selective pyrazolopyrimidine janus kinase 2 inhibitors.''; PubMed Europe PMC Scholia
  35. Lew DJ, Decker T, Strehlow I, Darnell JE.; ''Overlapping elements in the guanylate-binding protein gene promoter mediate transcriptional induction by alpha and gamma interferons.''; PubMed Europe PMC Scholia
  36. Igarashi K, Garotta G, Ozmen L, Ziemiecki A, Wilks AF, Harpur AG, Larner AC, Finbloom DS.; ''Interferon-gamma induces tyrosine phosphorylation of interferon-gamma receptor and regulated association of protein tyrosine kinases, Jak1 and Jak2, with its receptor.''; PubMed Europe PMC Scholia
  37. Greenlund AC, Morales MO, Viviano BL, Yan H, Krolewski J, Schreiber RD.; ''Stat recruitment by tyrosine-phosphorylated cytokine receptors: an ordered reversible affinity-driven process.''; PubMed Europe PMC Scholia
  38. Rupper AC, Cardelli JA.; ''Induction of guanylate binding protein 5 by gamma interferon increases susceptibility to Salmonella enterica serovar Typhimurium-induced pyroptosis in RAW 264.7 cells.''; PubMed Europe PMC Scholia
  39. Kaplan DH, Greenlund AC, Tanner JW, Shaw AS, Schreiber RD.; ''Identification of an interferon-gamma receptor alpha chain sequence required for JAK-1 binding.''; PubMed Europe PMC Scholia
  40. Liao J, Fu Y, Shuai K.; ''Distinct roles of the NH2- and COOH-terminal domains of the protein inhibitor of activated signal transducer and activator of transcription (STAT) 1 (PIAS1) in cytokine-induced PIAS1-Stat1 interaction.''; PubMed Europe PMC Scholia
  41. Pearse RN, Feinman R, Shuai K, Darnell JE, Ravetch JV.; ''Interferon gamma-induced transcription of the high-affinity Fc receptor for IgG requires assembly of a complex that includes the 91-kDa subunit of transcription factor ISGF3.''; PubMed Europe PMC Scholia
  42. Decker T, Lew DJ, Mirkovitch J, Darnell JE.; ''Cytoplasmic activation of GAF, an IFN-gamma-regulated DNA-binding factor.''; PubMed Europe PMC Scholia
  43. Palvimo JJ.; ''PIAS proteins as regulators of small ubiquitin-related modifier (SUMO) modifications and transcription.''; PubMed Europe PMC Scholia
  44. Yasukawa H, Misawa H, Sakamoto H, Masuhara M, Sasaki A, Wakioka T, Ohtsuka S, Imaizumi T, Matsuda T, Ihle JN, Yoshimura A.; ''The JAK-binding protein JAB inhibits Janus tyrosine kinase activity through binding in the activation loop.''; PubMed Europe PMC Scholia
  45. Boehm U, Klamp T, Groot M, Howard JC.; ''Cellular responses to interferon-gamma.''; PubMed Europe PMC Scholia
  46. Quelle FW, Thierfelder W, Witthuhn BA, Tang B, Cohen S, Ihle JN.; ''Phosphorylation and activation of the DNA binding activity of purified Stat1 by the Janus protein-tyrosine kinases and the epidermal growth factor receptor.''; PubMed Europe PMC Scholia
  47. Sasaki A, Yasukawa H, Suzuki A, Kamizono S, Syoda T, Kinjyo I, Sasaki M, Johnston JA, Yoshimura A.; ''Cytokine-inducible SH2 protein-3 (CIS3/SOCS3) inhibits Janus tyrosine kinase by binding through the N-terminal kinase inhibitory region as well as SH2 domain.''; PubMed Europe PMC Scholia
  48. Ozato K, Shin DM, Chang TH, Morse HC.; ''TRIM family proteins and their emerging roles in innate immunity.''; PubMed Europe PMC Scholia
  49. DeVries TA, Kalkofen RL, Matassa AA, Reyland ME.; ''Protein kinase Cdelta regulates apoptosis via activation of STAT1.''; PubMed Europe PMC Scholia
  50. Rajsbaum R, Stoye JP, O'Garra A.; ''Type I interferon-dependent and -independent expression of tripartite motif proteins in immune cells.''; PubMed Europe PMC Scholia
  51. Greenlund AC, Farrar MA, Viviano BL, Schreiber RD.; ''Ligand-induced IFN gamma receptor tyrosine phosphorylation couples the receptor to its signal transduction system (p91).''; PubMed Europe PMC Scholia
  52. Shuai K, Schindler C, Prezioso VR, Darnell JE.; ''Activation of transcription by IFN-gamma: tyrosine phosphorylation of a 91-kD DNA binding protein.''; PubMed Europe PMC Scholia
  53. Schroder K, Hertzog PJ, Ravasi T, Hume DA.; ''Interferon-gamma: an overview of signals, mechanisms and functions.''; PubMed Europe PMC Scholia
  54. Argetsinger LS, Kouadio JL, Steen H, Stensballe A, Jensen ON, Carter-Su C.; ''Autophosphorylation of JAK2 on tyrosines 221 and 570 regulates its activity.''; PubMed Europe PMC Scholia
  55. Argetsinger LS, Stuckey JA, Robertson SA, Koleva RI, Cline JM, Marto JA, Myers MG, Carter-Su C.; ''Tyrosines 868, 966, and 972 in the kinase domain of JAK2 are autophosphorylated and required for maximal JAK2 kinase activity.''; PubMed Europe PMC Scholia
  56. Clark JD, Flanagan ME, Telliez JB.; ''Discovery and development of Janus kinase (JAK) inhibitors for inflammatory diseases.''; PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
115093view17:04, 25 January 2021ReactomeTeamReactome version 75
113535view12:01, 2 November 2020ReactomeTeamReactome version 74
112733view16:13, 9 October 2020ReactomeTeamReactome version 73
101649view11:51, 1 November 2018ReactomeTeamreactome version 66
101185view21:39, 31 October 2018ReactomeTeamreactome version 65
100711view20:11, 31 October 2018ReactomeTeamreactome version 64
100261view16:56, 31 October 2018ReactomeTeamreactome version 63
99814view15:20, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99357view12:48, 31 October 2018ReactomeTeamreactome version 62
93905view13:44, 16 August 2017ReactomeTeamreactome version 61
93478view11:24, 9 August 2017ReactomeTeamreactome version 61
86576view09:21, 11 July 2016ReactomeTeamreactome version 56
83234view10:27, 18 November 2015ReactomeTeamVersion54
81633view13:10, 21 August 2015ReactomeTeamVersion53
77096view08:39, 17 July 2014ReactomeTeamFixed remaining interactions
76802view12:18, 16 July 2014ReactomeTeamFixed remaining interactions
76125view10:19, 11 June 2014ReactomeTeamRe-fixing comment source
75837view11:40, 10 June 2014ReactomeTeamReactome 48 Update
75198view09:43, 9 May 2014AnweshaFixing comment source for displaying WikiPathways description
74845view10:07, 30 April 2014ReactomeTeamReactome46
44865view09:58, 6 October 2011MartijnVanIerselOntology Term : 'immune response pathway' added !
42056view21:53, 4 March 2011MaintBotAutomatic update
39862view05:53, 21 January 2011MaintBotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ADPMetaboliteCHEBI:16761 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
B2MProteinP61769 (Uniprot-TrEMBL)
CIITAProteinP33076 (Uniprot-TrEMBL)
CaMKII and PKC-deltaProteinREACT_26704 (Reactome)
Class I MHC heavy chain ProteinREACT_26784 (Reactome)
FCGRAProteinREACT_26475 (Reactome)
GAF bound to GAS promoter elementComplexREACT_25470 (Reactome)
GAS promoter region in IFNG-regulated genesREACT_26763 (Reactome)
GBPProteinREACT_26189 (Reactome)
H2OMetaboliteCHEBI:15377 (ChEBI)
HLA class II histocompatibility antigen, DP ProteinP04440 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DP alpha chain precursor ProteinP20036 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DQ ProteinP01906 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DQ ProteinP01909 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DQ ProteinP01920 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DQ beta 2 chain ProteinP05538 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DQB1*0602 beta chain precursor ProteinP01920 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DR alpha chain precursor ProteinP01903 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DR beta 4 chain ProteinP13762 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DR beta 5 chain ProteinQ30154 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DR-1 beta chain precursor ProteinP01912 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-1 beta chain ProteinP04229 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-10 beta chain ProteinQ30167 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-11 beta chain ProteinP20039 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-12 beta chain ProteinQ95IE3 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-13 beta chain ProteinQ5Y7A7 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-14 beta chain ProteinQ9GIY3 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-15 beta chain ProteinP01911 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-16 beta chain ProteinQ29974 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-4 beta chain ProteinP13760 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-7 beta chain ProteinP13761 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-8 beta chain ProteinQ30134 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB1-9 beta chain precursor ProteinQ9TQE0 (Uniprot-TrEMBL)
HLA class II histocompatibility antigen, DRB3-1 beta chain precursor ProteinP79483 (Uniprot-TrEMBL)
IFI30ProteinP13284 (Uniprot-TrEMBL)
IFN-gamma upregulated CAMsProteinREACT_26072 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

JAK2
ComplexREACT_25865 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2 p-JAK2

SOCS-1/-3
ComplexREACT_26775 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

p-JAK2
ComplexREACT_26738 (Reactome)
IFNG

IFNGR1 p-JAK1 IFNGR2

p-JAK2
ComplexREACT_26286 (Reactome)
IFNG

p-IFNGR1 p-JAK1 IFNGR2

p-JAK2
ComplexREACT_25650 (Reactome)
IFNG ProteinP01579 (Uniprot-TrEMBL)
IFNG homodimerComplexREACT_26955 (Reactome)
IFNG-activated factor ComplexREACT_26144 (Reactome)
IFNG-activated factor ComplexREACT_26637 (Reactome)
IFNGR1

JAK1 INFG2

JAK2
ComplexREACT_25803 (Reactome)
IFNGR1 ProteinP15260 (Uniprot-TrEMBL)
IFNGR2 ProteinP38484 (Uniprot-TrEMBL)
IRF 1-9ProteinREACT_26465 (Reactome)
JAK1 ProteinP23458 (Uniprot-TrEMBL)
JAK2 ProteinO60674 (Uniprot-TrEMBL)
MHC class II alpha/beta dimerComplexREACT_121884 (Reactome)
MT2AProteinP02795 (Uniprot-TrEMBL)
OAS proteinsProteinREACT_26755 (Reactome)
PIAS1 ProteinO75925 (Uniprot-TrEMBL)
PIAS1ProteinO75925 (Uniprot-TrEMBL)
PMLProteinP29590 (Uniprot-TrEMBL)
PTAFRProteinP25105 (Uniprot-TrEMBL)
PTPN1ProteinP18031 (Uniprot-TrEMBL)
PTPN2-1ProteinP17706-2 (Uniprot-TrEMBL)
PTPN6ProteinP29350 (Uniprot-TrEMBL)
PTPs-SHP1/2/PTP1BProteinREACT_26675 (Reactome)
PiMetaboliteCHEBI:18367 (ChEBI)
SOCS-1 and SOCS-3ProteinREACT_25587 (Reactome)
SOCS1 ProteinO15524 (Uniprot-TrEMBL)
SOCS3 ProteinO14543 (Uniprot-TrEMBL)
SP100ProteinP23497 (Uniprot-TrEMBL)
STAT1 bound to p-IFNGR1ComplexREACT_26587 (Reactome)
STAT1-1 ProteinP42224-1 (Uniprot-TrEMBL)
STAT1-1ProteinP42224-1 (Uniprot-TrEMBL)
SUMO1 ProteinP63165 (Uniprot-TrEMBL)
SUMO1ProteinP63165 (Uniprot-TrEMBL)
p-S727,Y701-STAT1-1 ProteinP42224-1 (Uniprot-TrEMBL)
p-STAT1 dimer

PIAS

SUMO1
ComplexREACT_25840 (Reactome)
p-STAT1 dimer bound to p-IFNGR1ComplexREACT_25936 (Reactome)
p-STAT1ComplexREACT_26108 (Reactome)
p-Y-JAK1 ProteinP23458 (Uniprot-TrEMBL)
p-Y1007-JAK2 ProteinO60674 (Uniprot-TrEMBL)
p-Y440-IFNGR1 ProteinP15260 (Uniprot-TrEMBL)
p-Y701-STAT1-1 ProteinP42224-1 (Uniprot-TrEMBL)

Annotated Interactions

View all...
SourceTargetTypeDatabase referenceComment
ADPArrowREACT_24928 (Reactome)
ADPArrowREACT_24933 (Reactome)
ADPArrowREACT_24993 (Reactome)
ADPArrowREACT_25139 (Reactome)
ADPArrowREACT_25369 (Reactome)
ATPREACT_24928 (Reactome)
ATPREACT_24933 (Reactome)
ATPREACT_24993 (Reactome)
ATPREACT_25139 (Reactome)
ATPREACT_25369 (Reactome)
B2MArrowREACT_25082 (Reactome)
CIITAArrowREACT_25082 (Reactome)
CaMKII and PKC-deltaREACT_25369 (Reactome)
Class I MHC heavy chain ArrowREACT_25082 (Reactome)
FCGRAArrowREACT_25082 (Reactome)
GAF bound to GAS promoter elementArrowREACT_25082 (Reactome)
GAS promoter region in IFNG-regulated genesREACT_25118 (Reactome)
GBPArrowREACT_25082 (Reactome)
H2OREACT_25185 (Reactome)
H2OREACT_25190 (Reactome)
IFI30ArrowREACT_25082 (Reactome)
IFN-gamma upregulated CAMsArrowREACT_25082 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

JAK2
ArrowREACT_25190 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

JAK2
REACT_25139 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2 p-JAK2

SOCS-1/-3
TBarREACT_24928 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

p-JAK2
ArrowREACT_25139 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

p-JAK2
REACT_24928 (Reactome)
IFNG

IFNGR1 JAK1 IFNGR2

p-JAK2
REACT_25158 (Reactome)
IFNG

IFNGR1 p-JAK1 IFNGR2

p-JAK2
ArrowREACT_24928 (Reactome)
IFNG

IFNGR1 p-JAK1 IFNGR2

p-JAK2
REACT_24933 (Reactome)
IFNG

IFNGR1 p-JAK1 IFNGR2

p-JAK2
REACT_25190 (Reactome)
IFNG

p-IFNGR1 p-JAK1 IFNGR2

p-JAK2
ArrowREACT_24933 (Reactome)
IFNG

p-IFNGR1 p-JAK1 IFNGR2

p-JAK2
ArrowREACT_24944 (Reactome)
IFNG

p-IFNGR1 p-JAK1 IFNGR2

p-JAK2
REACT_25056 (Reactome)
IFNG homodimerREACT_25347 (Reactome)
IFNG-activated factor ArrowREACT_24944 (Reactome)
IFNG-activated factor REACT_25118 (Reactome)
IFNG-activated factor REACT_25185 (Reactome)
IFNG-activated factor REACT_25331 (Reactome)
IFNGR1

JAK1 INFG2

JAK2
REACT_25347 (Reactome)
IRF 1-9ArrowREACT_25082 (Reactome)
MHC class II alpha/beta dimerArrowREACT_25082 (Reactome)
MT2AArrowREACT_25082 (Reactome)
OAS proteinsArrowREACT_25082 (Reactome)
PIAS1REACT_25331 (Reactome)
PMLArrowREACT_25082 (Reactome)
PTAFRArrowREACT_25082 (Reactome)
PTPN2-1REACT_25185 (Reactome)
PTPN6TBarREACT_24928 (Reactome)
PTPs-SHP1/2/PTP1BREACT_25190 (Reactome)
PiArrowREACT_25185 (Reactome)
PiArrowREACT_25190 (Reactome)
REACT_24928 (Reactome) The initial phosphorylation of JAK1 and JAK2 is mediated by JAK2. Autophosphorylated JAK2 may transphopshorylate JAK1 bound to IFNGR1 chain. Tyrosine 1033 in the activation loop of the JAK1 kinase domain may be the target for transphosphorylation (phosphorylation site mentioned here is based on sequence similarity with all the other JAK kinases).
REACT_24933 (Reactome) The phosphorylated active JAK1 kinase inturn phosphorylates tyrosine residue 440 on each of the IFNGR1 chains to form two adjacent docking sites for the latent STAT1 SH2 domains.
REACT_24944 (Reactome) The phosphorylated STAT1 on IFNGR1 chains homodimerize through reciprocal SH2-phosphotyrosine interactions to form p-STAT1 homodimer called gamma-activated-factor (GAF). This phosphorylated STAT1 homodimer disassociates from the receptor complex and translocates to the nucleus.
REACT_24993 (Reactome) STAT1 pair recruited to the receptor complex is phosphorylated near the C-terminus at residue Y701, probably by JAK2. This phosphorylation enables the STAT1 homodimer formation which is further phosphorylated on residue S727.
REACT_25056 (Reactome) The phosphorylated tyrosine residue 440 in the 440YDKPH444 motif on IFNGR1 chain serves as a docking site and recruits STAT1, an SH2 domain-containing transcription factor to the functional receptor unit.
REACT_25082 (Reactome) IFN-gamma stimulates gene expression of about 200 genes which include the primary response genes like IRFs, Fc-gamma receptor (FCGR), GBPs (guanylate-binding proteins) and also major histocompatibility complex (MHC) class I and class II molecules, proteins involved in antigen presentation, antiviral proteins like PKR, OAS proteins etc. A wonderful list of most of the IFN-gamma inducible proteins with corresponding literature are mentioned in the review article and the supplementary document by Boehm et al 1997.
REACT_25118 (Reactome) GAF transcription factor translocated into nucleus binds to defined DNA sequence called GAS (gamma activated sequence) elements in the promoters of IFN-gamma responsive elements and initiate transcription.
REACT_25139 (Reactome) IFN-gamma binding to the receptor complex, induces JAK2 autophosphorylation and activation. Like all protein tyrosine kinases (PTKs) JAK2 activity also depends on the phosphorylation of tandem tyrosine residues within the activation loop that results in the removal of the activation loop from the active site. Multiple phosphorylation sites have been identified in JAK2 (tyrosines 221, 570, 868, 966, 972, 1007 and 1008 ) of which phosphorylation of tyrosine 1007 is essential for kinase activity. Tyrosine 1007 is in the activation loop and phosphorylation allows access of the catalytic loop to the ATP in the ATP binding domain. Of all the predicted phoshorylation sites only tyrosine 1007 is represented in the reaction.
REACT_25158 (Reactome) SOCS-1 and SOCS-3 coprecipitates with JAK kinases upon IFNG stimulation and are able to inhibit the JAK-STAT pathway, although with different affinity and kinetics. SOCS1 and SOCS3 binds to phosphorylated JAK1/2 and prevent the tyrosine kinase activity of JAKs through their kinase inhibitory region (KIR), thereby inhibiting downstream IFNG signaling. SOCS1 may also prevent IFNG signaling by targeting the signaling machinery to ubiquitin-proteasomal degradation pathway.
REACT_25185 (Reactome) The nuclear isoform of T cell protein tyrosine phosphatase (TC-PTP) referred as TC45 (or TC-PTPa) dephosphorylates p-STAT1 dimer in the nucleus. It can also dephosphorylate p-JAK1/3 in IFNG stimulated cells.
REACT_25190 (Reactome) Protein tyrosine phosphatases (PTPs) SHP1 and SHP2 down regulate the IFNG signaling by dephosphorylating the tyrosine residues critical to the activation of JAK kinases. PTP1B interacts directly with JAK2 but not JAK1 and dephosphorylate the tyrosine Y1007 on JAK2.
REACT_25331 (Reactome) PIAS1 protein interacts directly with phoshorylated STAT1 dimers and inhibit the transcriptional activity of STAT1 by blocking the DNA-binding domain of STAT1. It has also been suggested that PIAS proteins might regulate transcription by promoting small ubiquitin-related modifier (SUMO1) conjugation of STAT1. The significance of STAT1 sumoylation in regulating STAT1 activity is controversial and needs to be clarified.
REACT_25347 (Reactome) The IFNG receptor complex is a pre-assembled entity, as constitutive interactions are seen between IFNGR1 and IFNGR2, and between two IFNGR2 chains in the absence of ligand IFNG. JAK1 and JAK2 constitutively associate with the intracellular domains of the subunits of the IFNG receptor complex, providing it with tyrosine kinase activity. In unstimulated cells JAK1 preferentially associates with IFNGR1 and while JAK2 associates with IFNGR2 chains. JAK1 enhances the interaction between IFNGR1 and IFNGR2 chains, and thus has a major role in the pre-assembly of the IFNGR complex, in contrast the kinase activity of JAK2 is required to observe any signaling by IFNG.
IFNG binds directly to both the receptor chains IFNGR1 and IFNGR2. IFNGR1 is a high affinity receptor and binds directly to IFNG whereas IFNGR2 binds to IFNG in presence of IFNGR1. According to Krause et al. model IFNG binds to IFNGR1 chains first and then IFNGR2 chains interact with the IFNGR1:IFNG:IFNGR1 complex.
REACT_25369 (Reactome) Kinases like Protein kinase C delta (PKC-delta) and Calcium/calmodulin-dependent protein kinase II (CaMK II ) can phosphorylate STAT1 at serine 727 (S727). This phosphorylation is not required for STAT1 homodimer formation, nuclear translocation and DNA binding. However, it is essential for the full transcriptional activation of STAT1.
REACT_25379 (Reactome) Released GAF complex translocates to the nucleus and binds to the gamma-activated sequence (GAS) element present in the promoters of IFNG-regulated genes and induces the transcription of IFNG-responsive genes.
SOCS-1 and SOCS-3REACT_25158 (Reactome)
SP100ArrowREACT_25082 (Reactome)
STAT1 bound to p-IFNGR1REACT_24993 (Reactome)
STAT1-1ArrowREACT_25185 (Reactome)
STAT1-1REACT_25056 (Reactome)
SUMO1REACT_25331 (Reactome)
p-STAT1 dimer bound to p-IFNGR1ArrowREACT_25369 (Reactome)
p-STAT1ArrowREACT_24993 (Reactome)
p-STAT1REACT_25369 (Reactome)
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