Cytoplasmic ribosomal proteins (Danio rerio)

From WikiPathways

Description

Quality Tags

Ontology Terms

Bibliography

1. ''RPG Ribosomal Protein Gene Database''; http://ribosome.med.miyazaki-u.ac.jp/rpg.cgi?mode=orglist&org=Danio%20rerio, 2018

History

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Compare	Revision	Action	Time	User	Comment
	116855	view	10:51, 14 May 2021	Eweitz	Modified title
	96473	view	15:55, 15 March 2018	Mkutmon	Modified description
	96471	view	15:52, 15 March 2018	Mkutmon	removed old GenMAPP comments
	96466	view	15:46, 15 March 2018	Mkutmon	added missing identifiers and removed genes not present in Danio rerio
	84711	view	22:29, 15 March 2016	Khanspers	removed homology mapp label
	84704	view	21:45, 15 March 2016	Khanspers	Quick edit to datanode annotation or property
	71510	view	19:21, 17 October 2013	MaintBot	Automated update of data sources
	68637	view	04:50, 6 July 2013	MaintBot	Updated to 2013 gpml schema
	67138	view	10:11, 26 June 2013	Christine Chichester	Ontology Term : 'ribosome biogenesis pathway' added !
	40804	view	22:16, 1 March 2011	MaintBot	Removed redundant pathway information and comments
	34193	view	21:26, 9 December 2009	MaintBot	Automatic update of empty xrefs
	21361	view	11:31, 14 November 2008	MaintBot	[[Pathway:Danio rerio:Ribosomal Proteins]] moved to [[Pathway:WP324]]: Moved to stable identifier
	12060	view	08:46, 15 May 2008	MaintBot	Added to category $category
	12058	view	08:45, 15 May 2008	Kdahlquist	Uploaded new pathway

External references

DataNodes

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Name	Type	Database reference	Comment
rpl10	GeneProduct	336712 (Entrez Gene)
rpl10a	GeneProduct	323305 (Entrez Gene)	E. coli L1
rpl11	GeneProduct	415229 (Entrez Gene)	E. coli L5
rpl12	GeneProduct	327089 (Entrez Gene)	Also known as L16e. E. coli L11.
rpl13	GeneProduct	378961 (Entrez Gene)
rpl13a	GeneProduct	337766 (Entrez Gene)	E. coli L13
rpl14	GeneProduct	323365 (Entrez Gene)
rpl15	GeneProduct	445053 (Entrez Gene)
rpl17	GeneProduct	336641 (Entrez Gene)	E. coli L22
rpl18	GeneProduct	445038 (Entrez Gene)
rpl18a	GeneProduct	394035 (Entrez Gene)
rpl19	GeneProduct	406489 (Entrez Gene)
rpl21	GeneProduct	336568 (Entrez Gene)
rpl22	GeneProduct	557397 (Entrez Gene)
rpl23	GeneProduct	336812 (Entrez Gene)	E. coli L14
rpl23a	GeneProduct	335539 (Entrez Gene)	E. coli L23
rpl24	GeneProduct	192301 (Entrez Gene)
rpl26	GeneProduct	406387 (Entrez Gene)	E. coli L24
rpl27	GeneProduct	325618 (Entrez Gene)
rpl27a	GeneProduct	336726 (Entrez Gene)	E. coli L15
rpl28l	GeneProduct	394036 (Entrez Gene)
rpl29	GeneProduct	445040 (Entrez Gene)
rpl30	GeneProduct	336713 (Entrez Gene)	Also known as L25e.
rpl31	GeneProduct	677758 (Entrez Gene)
rpl32	GeneProduct	556556 (Entrez Gene)	Also known as S22e.
rpl3	GeneProduct	322571 (Entrez Gene)	E. coli L3
rpl34	GeneProduct	394097 (Entrez Gene)
rpl35	GeneProduct	192299 (Entrez Gene)	E. coli L29
rpl35a	GeneProduct	436760 (Entrez Gene)
rpl36	GeneProduct	405888 (Entrez Gene)
rpl36a	GeneProduct	195819 (Entrez Gene)
rpl37	GeneProduct	415159 (Entrez Gene)
rpl37a	GeneProduct	572109 (Entrez Gene)
rpl38	GeneProduct	436759 (Entrez Gene)
rpl39	GeneProduct	415168 (Entrez Gene)
rpl40	GeneProduct	641289 (Entrez Gene)	also called uba52
rpl41	GeneProduct	553805 (Entrez Gene)	also called mrpl41
rpl4	GeneProduct	337090 (Entrez Gene)	also known as L1e. No E. coli homologue
rpl5a	GeneProduct	326961 (Entrez Gene)	E. coli L18
rpl5b	GeneProduct	415196 (Entrez Gene)	E. coli L18
rpl6	GeneProduct	336727 (Entrez Gene)
rpl7	GeneProduct	336710 (Entrez Gene)	E. coli L30
rpl7a	GeneProduct	337010 (Entrez Gene)
rpl8	GeneProduct	393686 (Entrez Gene)	E. coli L2
rpl9	GeneProduct	336702 (Entrez Gene)	E. coli L6
rplp0	GeneProduct	58101 (Entrez Gene)	E. coli L10.
rplp1	GeneProduct	336719 (Entrez Gene)	E. coli L7/L12
rplp2	GeneProduct	335629 (Entrez Gene)	E. coli L7/L12
rps10	GeneProduct	394121 (Entrez Gene)	No E. coli homologue
rps11	GeneProduct	406686 (Entrez Gene)	E. coli S17
rps12	GeneProduct	337007 (Entrez Gene)	No E. coli homologue
rps13	GeneProduct	415169 (Entrez Gene)	E. coli S15
rps14	GeneProduct	336687 (Entrez Gene)	E. coli S11
rps15	GeneProduct	337148 (Entrez Gene)	E. coli S19
rps15a	GeneProduct	336764 (Entrez Gene)	E. coli S8
rps16	GeneProduct	767765 (Entrez Gene)	E. coli S9
rps17	GeneProduct	393818 (Entrez Gene)	No E. coli homologue
rps18	GeneProduct	ENSDARG00000100392 (Ensembl)	E. coli S13
rps19	GeneProduct	393723 (Entrez Gene)	No E. coli homologue
rps20	GeneProduct	ENSDARG00000036044 (Ensembl)	E. coli S10
rps21	GeneProduct	394166 (Entrez Gene)	No E. coli homologue
rps23	GeneProduct	100000341 (Entrez Gene)	E. coli S12
rps2	GeneProduct	406565 (Entrez Gene)	E. coli S5
rps24	GeneProduct	394194 (Entrez Gene)	Also known as L33e. No E. coli homologue.
rps25	GeneProduct	393788 (Entrez Gene)	No E. coli homologue
rps26	GeneProduct	336662 (Entrez Gene)	No E. coli homologue
rps27	GeneProduct	393738 (Entrez Gene)	No E. coli homologue
rps27a	GeneProduct	337810 (Entrez Gene)	No E. coli homologue
rps28	GeneProduct	406307 (Entrez Gene)	No E. coli homologue
rps29	GeneProduct	405889 (Entrez Gene)	E. coli S14
rps30	GeneProduct	550564 (Entrez Gene)	also called faub
rps3	GeneProduct	336550 (Entrez Gene)	E. coli S3
rps3a	GeneProduct	337240 (Entrez Gene)	No E. coli homologue
rps4x	GeneProduct	449547 (Entrez Gene)	No E. coli homologue
rps5	GeneProduct	192297 (Entrez Gene)	E. coli S7
rps6	GeneProduct	445028 (Entrez Gene)	No E. coli homologue
rps7	GeneProduct	393725 (Entrez Gene)	No E. coli homologue
rps8	GeneProduct	407690 (Entrez Gene)	No E. coli homologue
rps8b	GeneProduct	100000836 (Entrez Gene)	No E. coli homologue
rps9	GeneProduct	114420 (Entrez Gene)	E. coli S4
rpsa	GeneProduct	394027 (Entrez Gene)	E. coli S2

Annotated Interactions

No annotated interactions