RORA activates gene expression (Homo sapiens)

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81, 4, 72, 5, 6, 9cytosolnucleoplasmmitochondrial outer membraneendoplasmic reticulum membraneTGS1 SMARCD3 LINA RORA EPA NCOA1 Peroxisome Proliferator Receptor Element (PPRE) HELZ2 CARM1 PPARA SREBF1 geneRORA RORA:EP300:SREBF1geneALA RORACPT1APalm CREBBP EP300NCOA2 RXRA CHD9 TBL1XR1 AA MED1 CPT1A geneTBL1X CPT1A gene EP300 SREBF1(1-1147)SREBF1 gene RORA:EP300:CPT1AgeneNCOA6 PPARA:RXRACoactivator complexEP300 3


Description

As inferred from mouse, RORA binds ROR elements (ROREs) in DNA and recruits the coactivators PPARGC1A (PGC-1alpha) and p300 (EP300, a histone acetylase) to activate transcription. View original pathway at:Reactome.

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 1368082
Reactome-version 
Reactome version: 66
Reactome Author 
Reactome Author: May, Bruce

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Bibliography

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  1. Giguère V, Tini M, Flock G, Ong E, Evans RM, Otulakowski G.; ''Isoform-specific amino-terminal domains dictate DNA-binding properties of ROR alpha, a novel family of orphan hormone nuclear receptors.''; PubMed Europe PMC Scholia
  2. Kawabe Y, Honda M, Wada Y, Yazaki Y, Suzuki T, Ohba Y, Nabata H, Endo A, Matsumoto A, Itakura H.; ''Sterol mediated regulation of SREBP-1a,1b,1c and SREBP-2 in cultured human cells.''; PubMed Europe PMC Scholia
  3. Wang X, Sato R, Brown MS, Hua X, Goldstein JL.; ''SREBP-1, a membrane-bound transcription factor released by sterol-regulated proteolysis.''; PubMed Europe PMC Scholia
  4. Juge-Aubry C, Pernin A, Favez T, Burger AG, Wahli W, Meier CA, Desvergne B.; ''DNA binding properties of peroxisome proliferator-activated receptor subtypes on various natural peroxisome proliferator response elements. Importance of the 5'-flanking region.''; PubMed Europe PMC Scholia
  5. Britton CH, Schultz RA, Zhang B, Esser V, Foster DW, McGarry JD.; ''Human liver mitochondrial carnitine palmitoyltransferase I: characterization of its cDNA and chromosomal localization and partial analysis of the gene.''; PubMed Europe PMC Scholia
  6. Shimomura I, Shimano H, Horton JD, Goldstein JL, Brown MS.; ''Differential expression of exons 1a and 1c in mRNAs for sterol regulatory element binding protein-1 in human and mouse organs and cultured cells.''; PubMed Europe PMC Scholia
  7. Johnson EF, Hsu MH, Savas U, Griffin KJ.; ''Regulation of P450 4A expression by peroxisome proliferator activated receptors.''; PubMed Europe PMC Scholia
  8. Rakhshandehroo M, Hooiveld G, Müller M, Kersten S.; ''Comparative analysis of gene regulation by the transcription factor PPARalpha between mouse and human.''; PubMed Europe PMC Scholia
  9. Yokoyama C, Wang X, Briggs MR, Admon A, Wu J, Hua X, Goldstein JL, Brown MS.; ''SREBP-1, a basic-helix-loop-helix-leucine zipper protein that controls transcription of the low density lipoprotein receptor gene.''; PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
114909view16:42, 25 January 2021ReactomeTeamReactome version 75
113354view11:42, 2 November 2020ReactomeTeamReactome version 74
112563view15:53, 9 October 2020ReactomeTeamReactome version 73
101476view11:34, 1 November 2018ReactomeTeamreactome version 66
101014view21:13, 31 October 2018ReactomeTeamreactome version 65
100550view19:47, 31 October 2018ReactomeTeamreactome version 64
100098view16:32, 31 October 2018ReactomeTeamreactome version 63
99648view15:04, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99250view12:44, 31 October 2018ReactomeTeamreactome version 62
93649view11:29, 9 August 2017ReactomeTeamreactome version 61
86765view09:25, 11 July 2016ReactomeTeamreactome version 56
83362view10:58, 18 November 2015ReactomeTeamVersion54
81526view13:04, 21 August 2015ReactomeTeamNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
AA MetaboliteCHEBI:15843 (ChEBI)
ALA MetaboliteCHEBI:27432 (ChEBI)
CARM1 ProteinQ86X55 (Uniprot-TrEMBL)
CHD9 ProteinQ3L8U1 (Uniprot-TrEMBL)
CPT1A gene ProteinENSG00000110090 (Ensembl)
CPT1A geneGeneProductENSG00000110090 (Ensembl)
CPT1AProteinP50416 (Uniprot-TrEMBL)
CREBBP ProteinQ92793 (Uniprot-TrEMBL)
EP300 ProteinQ09472 (Uniprot-TrEMBL)
EP300ProteinQ09472 (Uniprot-TrEMBL)
EPA MetaboliteCHEBI:28364 (ChEBI)
HELZ2 ProteinQ9BYK8 (Uniprot-TrEMBL)
LINA MetaboliteCHEBI:17351 (ChEBI)
MED1 ProteinQ15648 (Uniprot-TrEMBL) MED1 is a component of each of the various Mediator complexes, that function as transcription co-activators. The MED1-containing compolexes include the DRIP, ARC, TRIP and CRSP compllexes.
NCOA1 ProteinQ15788 (Uniprot-TrEMBL)
NCOA2 ProteinQ15596 (Uniprot-TrEMBL)
NCOA6 ProteinQ14686 (Uniprot-TrEMBL)
PPARA ProteinQ07869 (Uniprot-TrEMBL)
PPARA:RXRA Coactivator complexComplexR-HSA-400154 (Reactome)
Palm MetaboliteCHEBI:15756 (ChEBI)
Peroxisome Proliferator Receptor Element (PPRE) R-ALL-422139 (Reactome) Peroxisome proliferator receptor elements bind heterodimers containing a peroxisome proliferator receptor and a retinoic acid receptor. The consensus sequence is TGAMCTTTGNCCTAGWTYYG.
RORA ProteinP35398 (Uniprot-TrEMBL)
RORA:EP300:CPT1A geneComplexR-HSA-5663244 (Reactome)
RORA:EP300:SREBF1 geneComplexR-HSA-5663295 (Reactome)
RORAProteinP35398 (Uniprot-TrEMBL)
RXRA ProteinP19793 (Uniprot-TrEMBL)
SMARCD3 ProteinQ6STE5 (Uniprot-TrEMBL)
SREBF1 gene ProteinENSG00000072310 (Ensembl)
SREBF1 geneGeneProductENSG00000072310 (Ensembl)
SREBF1(1-1147)ProteinP36956 (Uniprot-TrEMBL)
TBL1X ProteinO60907 (Uniprot-TrEMBL)
TBL1XR1 ProteinQ9BZK7 (Uniprot-TrEMBL)
TGS1 ProteinQ96RS0 (Uniprot-TrEMBL)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
CPT1A geneR-HSA-1801587 (Reactome)
CPT1A geneR-HSA-5663264 (Reactome)
CPT1AArrowR-HSA-1801587 (Reactome)
EP300R-HSA-5663264 (Reactome)
EP300R-HSA-5663293 (Reactome)
PPARA:RXRA Coactivator complexArrowR-HSA-1801587 (Reactome)
R-HSA-1368081 (Reactome) The SREBF1 (SREBP1) gene is transcribed to yield mRNA and the mRNA is translated to yield protein.
R-HSA-1801587 (Reactome) The CPT1A gene is transcribed to yield mRNA and the mRNA is translated to yield protein.
R-HSA-5663264 (Reactome) As inferred from mouse, RORA binds RRE DNA elements and recruits the coactivators PGC-1alpha (PPARGC1A) and p300 (EP300, a histone acetylase). As inferred from mouse, ROR-alpha binds the promoter of the CPT1A gene and, together with coactivators EP300 and PGC-1alpha, enhances transcription.
R-HSA-5663293 (Reactome) As inferred from mouse, RORA binds the promoter of the SREBF1 gene and recruits coactivators to enhance transcription.
RORA:EP300:CPT1A geneArrowR-HSA-1801587 (Reactome)
RORA:EP300:CPT1A geneArrowR-HSA-5663264 (Reactome)
RORA:EP300:SREBF1 geneArrowR-HSA-1368081 (Reactome)
RORA:EP300:SREBF1 geneArrowR-HSA-5663293 (Reactome)
RORAR-HSA-5663264 (Reactome)
RORAR-HSA-5663293 (Reactome)
SREBF1 geneR-HSA-1368081 (Reactome)
SREBF1 geneR-HSA-5663293 (Reactome)
SREBF1(1-1147)ArrowR-HSA-1368081 (Reactome)
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