Phenylpropanoid biosynthesis (Zea mays)

From WikiPathways

Revision as of 14:42, 8 September 2015 by Anwesha (Talk | contribs)
Jump to: navigation, search
cytosolquinateCoA-SHCoA-SHGRMZM2G035584caffeoyl-CoAO-methyltransferaseNADPHCoA-SHGRMZM5G844562CoA-SHPPiGRMZM2G131205SKMsinapaldehydeH+NADPHNADPHNADP+NADPHGRMZM2G1312054-coumarateSKMO24-coumarate--CoAligaseconiferyl alcoholquinateH+AdoHcyO2NADP+NADP+coniferyl aldehydeH2ONADP+GRMZM2G035584H+AdoMetAdoHcyNADPHCoA-SHNADP+NADPH4-coumaroyl-CoANADPHO2ATPGRMZM2G100158NADP+GRMZM5G844562H+NADP+H+H+H2OH+GRMZM2G082007AdoMetGRMZM2G140817AMPferuloyl-CoANADPHGRMZM5G8445624-coumaroylshikimateH2ONADP+caffeoyl-CoA


Description

This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.<p>Details of projection methods and parameters may be found <a href="/projection.html">here.</a><p> Source:Plant Reactome.</div>

Try the New WikiPathways

View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

No bibliography


History

CompareRevisionActionTimeUserComment
118223view11:57, 26 May 2021EweitzModified title
82083view14:42, 8 September 2015Anweshafixing title, data source, & tagging incomplete pathways
80527view14:49, 25 June 2015AnweshaNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
Metabolite
4-coumarate--CoA ligaseProtein5405191 (Reactome)
4-coumarateMetaboliteCHEBI:32374 (ChEBI)
4-coumaroyl-CoAMetaboliteCHEBI:15499 (ChEBI)
4-coumaroylshikimateMetaboliteCHEBI:16428 (ChEBI)
AMPMetaboliteCHEBI:16027 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
AdoHcyMetaboliteCHEBI:16680 (ChEBI)
AdoMetMetaboliteCHEBI:15414 (ChEBI)
CoA-SHMetaboliteCHEBI:15346 (ChEBI)
GRMZM2G035584ProteinGRMZM2G035584 (MaizeGDB)
GRMZM2G082007ProteinGRMZM2G082007 (MaizeGDB)
GRMZM2G100158ProteinGRMZM2G100158 (MaizeGDB)
GRMZM2G131205ProteinGRMZM2G131205 (MaizeGDB)
GRMZM2G140817ProteinGRMZM2G140817 (MaizeGDB)
GRMZM5G844562ProteinGRMZM5G844562 (MaizeGDB)
H+MetaboliteCHEBI:15378 (ChEBI)
H2OMetaboliteCHEBI:15377 (ChEBI)
NADP+MetaboliteCHEBI:18009 (ChEBI)
NADPHMetaboliteCHEBI:16474 (ChEBI)
O2MetaboliteCHEBI:15379 (ChEBI)
PPiMetaboliteCHEBI:29888 (ChEBI)
SKMMetaboliteCHEBI:16119 (ChEBI)
caffeoyl-CoA O-methyltransferaseProtein5405677 (Reactome)
caffeoyl-CoAMetaboliteCHEBI:15518 (ChEBI)
coniferyl alcoholMetaboliteCHEBI:17745 (ChEBI)
coniferyl aldehydeMetaboliteCHEBI:16547 (ChEBI)
feruloyl-CoAMetaboliteCHEBI:15511 (ChEBI)
quinateMetaboliteCHEBI:17521 (ChEBI)
sinapaldehydeMetaboliteCHEBI:27949 (ChEBI)

Annotated Interactions

View all...
SourceTargetTypeDatabase referenceComment
4-coumarate--CoA ligasemim-catalysis5405193 (Reactome)
4-coumarate5405193 (Reactome)
4-coumaroyl-CoA5403580 (Reactome)
4-coumaroyl-CoA5404733 (Reactome)
4-coumaroyl-CoA5405210 (Reactome)
4-coumaroyl-CoAArrow5405193 (Reactome)
4-coumaroylshikimate5404226 (Reactome)
4-coumaroylshikimateArrow5405210 (Reactome)
5402566 (Reactome)
5403331 (Reactome)
5403383 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5403580 (Reactome)
5403643 (Reactome)
5404226 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5404496 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5404733 (Reactome)
5405193 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5405195 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5405210 (Reactome)
5405452 (Reactome)
5405606 (Reactome)
5405679 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5405852 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


AMPArrow5405193 (Reactome)
ATP5405193 (Reactome)
AdoHcyArrow5405452 (Reactome)
AdoHcyArrow5405679 (Reactome)
AdoMet5405452 (Reactome)
AdoMet5405679 (Reactome)
Arrow5403383 (Reactome)
Arrow5403580 (Reactome)
Arrow5403643 (Reactome)
Arrow5404226 (Reactome)
Arrow5404496 (Reactome)
Arrow5404733 (Reactome)
Arrow5405606 (Reactome)
CoA-SH5402566 (Reactome)
CoA-SH5403331 (Reactome)
CoA-SH5405193 (Reactome)
CoA-SHArrow5403580 (Reactome)
CoA-SHArrow5404733 (Reactome)
CoA-SHArrow5405195 (Reactome)
CoA-SHArrow5405210 (Reactome)
GRMZM2G035584mim-catalysis5402566 (Reactome)
GRMZM2G035584mim-catalysis5403331 (Reactome)
GRMZM2G035584mim-catalysis5404733 (Reactome)
GRMZM2G035584mim-catalysis5405210 (Reactome)
GRMZM2G082007mim-catalysis5405452 (Reactome)
GRMZM2G100158mim-catalysis5403383 (Reactome)
GRMZM2G131205mim-catalysis5403580 (Reactome)
GRMZM2G131205mim-catalysis5405195 (Reactome)
GRMZM2G140817mim-catalysis5403643 (Reactome)
GRMZM2G140817mim-catalysis5404226 (Reactome)
GRMZM5G844562mim-catalysis5404496 (Reactome)
GRMZM5G844562mim-catalysis5405606 (Reactome)
GRMZM5G844562mim-catalysis5405852 (Reactome)
H+5403383 (Reactome)
H+5403580 (Reactome)
H+5403643 (Reactome)
H+5404226 (Reactome)
H+5404496 (Reactome)
H+5405606 (Reactome)
H+5405852 (Reactome)
H2OArrow5403383 (Reactome)
H2OArrow5403643 (Reactome)
H2OArrow5404226 (Reactome)
NADP+Arrow5403383 (Reactome)
NADP+Arrow5403580 (Reactome)
NADP+Arrow5403643 (Reactome)
NADP+Arrow5404226 (Reactome)
NADP+Arrow5404496 (Reactome)
NADP+Arrow5405195 (Reactome)
NADP+Arrow5405606 (Reactome)
NADP+Arrow5405852 (Reactome)
NADPH5403383 (Reactome)
NADPH5403580 (Reactome)
NADPH5403643 (Reactome)
NADPH5404226 (Reactome)
NADPH5404496 (Reactome)
NADPH5405195 (Reactome)
NADPH5405606 (Reactome)
NADPH5405852 (Reactome)
O25403383 (Reactome)
O25403643 (Reactome)
O25404226 (Reactome)
PPiArrow5405193 (Reactome)
SKM5405210 (Reactome)
SKMArrow5402566 (Reactome)
caffeoyl-CoA O-methyltransferasemim-catalysis5405679 (Reactome)
caffeoyl-CoA5405679 (Reactome)
caffeoyl-CoAArrow5402566 (Reactome)
caffeoyl-CoAArrow5403331 (Reactome)
coniferyl alcoholArrow5405852 (Reactome)
coniferyl aldehyde5403383 (Reactome)
coniferyl aldehyde5405852 (Reactome)
coniferyl aldehydeArrow5405195 (Reactome)
feruloyl-CoA5405195 (Reactome)
feruloyl-CoAArrow5405679 (Reactome)
quinate5404733 (Reactome)
quinateArrow5403331 (Reactome)
sinapaldehyde5404496 (Reactome)
sinapaldehydeArrow5405452 (Reactome)

Personal tools