TCA cycle - detailed (Saccharomyces cerevisiae)

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Revision as of 23:55, 22 October 2024 by Khanspers (Talk | contribs)
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Description

The tricarboxylic acid (TCA) cycle is a catabolic pathway that functions to generate energy and reduced cofactors from the oxidative decarboxylation of acetyl (C2) units. It occupies a central role in the metabolism of aerobic organisms, enabling the production of energy from carbohydrates, fatty acids, amino acids, and potentially any other molecule that can be converted or broken down to acetyl-CoA. In addition to its role in catabolism, the TCA cycle can also serve a biosynthetic role, as several intermediates in the pathway (e.g. oxaloacetate, succinate) provide carbon for the synthesis of amino acids or other biological compounds. Source: https://pathway.yeastgenome.org/

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Ontology Terms

 

Bibliography

  1. ''TCA cycle, aerobic respiration ''; YeastPathways,

History

View all...
CompareRevisionActionTimeUserComment
135687view23:59, 22 October 2024KhanspersOntology Term : 'energy metabolic pathway' added !
135686view23:57, 22 October 2024KhanspersModified description
135685view23:55, 22 October 2024Khanspersupdated reference
135684view23:55, 22 October 2024Khanspersoverhaul
117347view11:53, 20 May 2021EweitzModified title
102417view09:57, 23 December 2018EgonwReplaced a deleted CAS number with the active one.
76239view17:22, 20 June 2014MaintBotModified title
71338view18:01, 17 October 2013MaintBotAutomated update of data sources
67691view11:49, 26 June 2013DdiglesOntology Term : 'citrate cycle pathway' added !
62168view12:05, 25 April 2013EgonwConverted labels into Metabolite DataNode's.
62167view12:01, 25 April 2013EgonwConnected some dots.
41807view04:48, 2 March 2011MaintBotRemoved redundant pathway information and comments
34361view22:30, 9 December 2009MaintBotAutomatic update of empty xrefs
29181view18:13, 9 April 2009KhanspersChanged name
21303view11:31, 14 November 2008MaintBot[[Pathway:Saccharomyces cerevisiae:TCA cycle]] moved to [[Pathway:WP296]]: Moved to stable identifier
12865view08:06, 17 May 2008MaintBotautomated metabolite conversion
8954view14:13, 7 January 2008MaintBotAdded to category $category
8952view14:13, 7 January 2008J.HeckmanUploaded new pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
2-ketoglutarate dehydrogenaseGeneProductS000001387 (SGD)
2-oxoglutarateMetabolite16810 (ChEBI)
ADPMetabolite58-64-0 (CAS)
ATPMetabolite1927-31-7 (CAS)
CHO3Metabolite17544 (ChEBI)
CO2Metabolite16526 (ChEBI)
Coenzyme AMetabolite64885-97-8 (CAS)
D-threo-isocitrate Metabolite15562 (ChEBI)
H+Metabolite15378 (ChEBI)
H2OMetabolite15377 (ChEBI)
NAD+Metabolite57540 (ChEBI)
NADHMetabolite53-84-9 (CAS)
acetyl-CoAMetabolite72-89-9 (CAS)
aconitaseGeneProductS000004295 (SGD)
aconitate hydrataseGeneProductS000003736 (SGD)
cis-aconitateMetabolite16383 (ChEBI)
citrate synthase 1GeneProductS000005284 (SGD)
citrate synthase 2GeneProductS000000598 (SGD)
citrate synthase 3GeneProductS000006205 (SGD)
citrateMetabolite16947 (ChEBI)
cytoplasmic malate dehydrogenaseGeneProductS000005486 (SGD)
dihydrolipoamide dehydrogenaseGeneProductS000001876 (SGD)
dihydrolipoyl transsuccinylaseGeneProductS000002555 (SGD)
fumarate hydrataseGeneProductS000006183 (SGD)
fumarateMetabolite29806 (ChEBI)
isocitrate dehydrogenase 1GeneProductS000004982 (SGD)
isocitrate dehydrogenase 2GeneProductS000005662 (SGD)
malate dehydrogenaseGeneProductS000002236 (SGD)
malateMetabolite15589 (ChEBI)
mitochondrial malate dehydrogenaseGeneProductS000001568 (SGD)
oxaloacetic acidMetaboliteHMDB0000223 (HMDB)
phosphateMetabolite14265-44-2 (CAS)
pyruvate carboxylase 1GeneProductS000003030 (SGD)
pyruvate carboxylase 2GeneProductS000000422 (SGD)
pyruvateMetaboliteHMDB0000243 (HMDB)
succinate dehydrogenase 1GeneProductS000001631 (SGD)
succinate dehydrogenase 2GeneProductS000003964 (SGD)
succinate dehydrogenase 3GeneProductS000001624 (SGD)
succinate dehydrogenase 4GeneProductS000002585 (SGD)
succinateMetabolite30031 (ChEBI)
succinyl-CoA ligase 1GeneProductS000005668 (SGD)
succinyl-CoA ligase 2GeneProductS000003476 (SGD)
succinyl-CoAMetabolite57292 (ChEBI)
ubiqionolMetabolite17976 (ChEBI)
ubiquinoneMetabolite303-97-9 (CAS)

Annotated Interactions

No annotated interactions

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