miR-targeted genes in squamous cell (Homo sapiens)

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FBXW1BAKAP8GOLGA7NM_032121CBFBFNDC3BDNAJB1OPRS1METSLC38A2METFNDC3ATPM3PISDPKM2PWP1DHX57SLC12A2MTPN RARSSLC4A10TRAM1SPCS3ATP6V0ERHEBCBFBBET1E2F3ANP32BNCLSDCBPTMED2DHX40SH3BP4SLC38A1PDLIM7PXDNACAA2AKAP8LAMC1 / laminin gamma METANXA2TNFRSF10BNPTPM1SLC38A1MOV10POM121HOXA7MTPN GYS1NRASTPM1ATP6V1C1LAMC1 / laminin gamma FMNL2ARCN1HBXIPCTDSP1 THBS1 PICALMHNRPMTMEM59HMOX1IDH1TPM3SPTLC1FGF2NEDD4SLC38A1GAS2L1SFRS9P4HA2AP3D1ADIPOR2 RTN4ATP2A2VCAM1SYNE2SRPRBtuba3TICAM2FAM96AAP2A1GALNT1COMMD9POLD2CUL4BARFIP1RAI14ARF4TXNRD1SMAD1TMED7CPNE8NF2MAP3K8NPTHBS1YWHAQFAM96AMETTHBS1ATRXVEZT / vezatinPKM2GNAI2SMAD1SMAD1TMEM43MTPN ANPEPHES1 RAB34UBE2V1PODXLMRC2AXLTBCADNAJB1UBE2J1HMGA1ADARPOLR2CCHMP2ANRP1ELOVL5SEC23AHSD17B12PICALMPTMAMPZL1KDELC2NPPDCD4ATP6V1FERGGFPT1MRPL20TGFB1GALNT7ANPEPDHX57PPP1R7SH3BGRL3THBS1POM121GALNT7TMED10PRPF40AMRPS33TGFBR2LAMC1let-7bLNA_let-7bmiR-155miR-16miR-1miR-30HSV1-miR-LATmiR-103-1let-7alet-7bmiR-124miR-124amiR-126miR-133miR-133amiR-133bmiR-196miR-199amiR-20amiR-21miR-23miR-26miR-26amiR-29cmiR-30a-3pmiR-34amiR-370miR-375


Description

This catalogue pathway was created using the database from "http://diana.cslab.ece.ntua.gr/tarbase/" with exclusions based on evidance type. This pathway only incldes miR targeted genes expressed in Muscle cells. This pathway is meant for data mapping.

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Quality Tags

Ontology Terms

 

Bibliography

  1. Skoufos G, Kakoulidis P, Tastsoglou S, Zacharopoulou E, Kotsira V, Miliotis M, Mavromati G, Grigoriadis D, Zioga M, Velli A, Koutou I, Karagkouni D, Stavropoulos S, Kardaras FS, Lifousi A, Vavalou E, Ovsepian A, Skoulakis A, Tasoulis SK, Georgakopoulos SV, Plagianakos VP, Hatzigeorgiou AG; ''TarBase-v9.0 extends experimentally supported miRNA-gene interactions to cell-types and virally encoded miRNAs.''; Nucleic Acids Res, 2024 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
135703view16:34, 27 October 2024EweitzAdd literature reference
116534view12:06, 7 May 2021EweitzModified title
103016view15:31, 31 January 2019Marvin M2Updated miRNA ID of MIRLET7B
102159view19:34, 4 December 2018Khanspersupdated xrefs for miRNAs
98365view06:46, 24 August 2018EgonwUpdated the MIR21 identifier.
88592view19:39, 11 August 2016Mkutmonfix unconnected lines
82899view13:50, 11 November 2015JmeliusCorrect outdated id
79984view15:44, 29 April 2015ZariCorrected Ensembl ID for MRPL20 and PISD genes
78523view10:29, 7 January 2015MaintBotadded missing graphIds
75320view21:28, 16 May 2014KhanspersmiRNA xrefs and layout
69040view17:52, 8 July 2013MaintBotUpdated to 2013 gpml schema
64825view21:17, 3 June 2013MaintBotModified title
59220view20:13, 22 February 2013MaintBotUpdated Ensembl and UniProt data source
57856view18:36, 4 February 2013MaintBotOntology Term : 'miRNA pathway' added !
44276view18:12, 30 August 2011MaintBotModified categories
44275view18:12, 30 August 2011MaintBotModified description
43665view17:35, 13 July 2011Samuel SklarNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ACAA2GeneProductENSG00000167315 (Ensembl Human)
ADARGeneProductENSG00000160710 (Ensembl Human)
ADIPOR2 GeneProductENSG00000006831 (Ensembl Human)
AKAP8GeneProductENSG00000105127 (Ensembl Human)
ANP32BGeneProductENSG00000136938 (Ensembl Human)
ANPEPGeneProductENSG00000166825 (Ensembl Human)
ANXA2GeneProductENSG00000182718 (Ensembl Human)
AP2A1GeneProductENSG00000196961 (Ensembl Human)
AP3D1GeneProductENSG00000065000 (Ensembl Human)
ARCN1GeneProductENSG00000095139 (Ensembl Human)
ARF4GeneProductENSG00000168374 (Ensembl Human)
ARFIP1GeneProductENSG00000164144 (Ensembl Human)
ATP2A2GeneProductENSG00000174437 (Ensembl Human)
ATP6V0EGeneProductENSG00000113732 (Ensembl Human)
ATP6V1C1GeneProductENSG00000155097 (Ensembl Human)
ATP6V1FGeneProductENSG00000128524 (Ensembl Human)
ATRXGeneProductENSG00000085224 (Ensembl Human)
AXLGeneProductENSG00000167601 (Ensembl Human)
BET1GeneProductENSG00000105829 (Ensembl Human)
CBFBGeneProductENSG00000067955 (Ensembl Human)
CHMP2AGeneProductENSG00000130724 (Ensembl Human)
COMMD9GeneProductENSG00000110442 (Ensembl Human)
CPNE8GeneProductENSG00000139117 (Ensembl Human)
CTDSP1 GeneProductENSG00000144579 (Ensembl Human)
CUL4BGeneProductENSG00000158290 (Ensembl Human)
DHX40GeneProductENSG00000108406 (Ensembl Human)
DHX57GeneProductENSG00000163214 (Ensembl Human)
DNAJB1GeneProductENSG00000132002 (Ensembl Human)
E2F3GeneProductENSG00000112242 (Ensembl Human)
ELOVL5GeneProductENSG00000012660 (Ensembl Human)
ERGGeneProductENSG00000157554 (Ensembl Human)
FAM96AGeneProductENSG00000166797 (Ensembl Human)
FBXW1BGeneProductENSG00000072803 (Ensembl Human)
FGF2GeneProductENSG00000138685 (Ensembl Human)
FMNL2GeneProductENSG00000157827 (Ensembl Human)
FNDC3AGeneProductENSG00000102531 (Ensembl Human)
FNDC3BGeneProductENSG00000075420 (Ensembl Human)
GALNT1GeneProductENSG00000141429 (Ensembl Human)
GALNT7GeneProductENSG00000109586 (Ensembl Human)
GAS2L1GeneProductENSG00000185340 (Ensembl Human)
GFPT1GeneProductENSG00000198380 (Ensembl Human)
GNAI2GeneProductENSG00000114353 (Ensembl Human)
GOLGA7GeneProductENSG00000147533 (Ensembl Human)
GYS1GeneProductENSG00000104812 (Ensembl Human)
HBXIPGeneProductENSG00000134248 (Ensembl Human)
HES1 GeneProductENSG00000114315 (Ensembl Human)
HMGA1GeneProductENSG00000137309 (Ensembl Human)
HMOX1GeneProductENSG00000100292 (Ensembl Human)
HNRPMGeneProductENSG00000099783 (Ensembl Human)
HOXA7GeneProductENSG00000122592 (Ensembl Human)
HSD17B12GeneProductENSG00000149084 (Ensembl Human)
IDH1GeneProductENSG00000138413 (Ensembl Human)
KDELC2GeneProductENSG00000178202 (Ensembl Human)
LAMC1 / laminin gamma GeneProductENSG00000135862 (Ensembl Human)
LAMC1GeneProductENSG00000135862 (Ensembl Human)
MAP3K8GeneProductENSG00000107968 (Ensembl Human)
METGeneProductENSG00000105976 (Ensembl Human)
MOV10GeneProductENSG00000155363 (Ensembl Human)
MPZL1GeneProductENSG00000197965 (Ensembl Human)
MRC2GeneProductENSG00000011028 (Ensembl Human)
MRPL20GeneProductENSG00000131586 (Ensembl Human)
MRPS33GeneProductENSG00000090263 (Ensembl Human)
MTPN GeneProductENSG00000105887 (Ensembl Human)
NCLGeneProductENSG00000115053 (Ensembl Human)
NEDD4GeneProductENSG00000069869 (Ensembl Human)
NF2GeneProductENSG00000186575 (Ensembl Human)
NM_032121GeneProductENSG00000102158 (Ensembl Human)
NPGeneProductENSG00000198805 (Ensembl Human)
NRASGeneProductENSG00000009307 (Ensembl Human)
NRP1GeneProductENSG00000099250 (Ensembl Human)
OPRS1GeneProductENSG00000147955 (Ensembl Human)
P4HA2GeneProductENSG00000072682 (Ensembl Human)
PDCD4GeneProductENSG00000150593 (Ensembl Human)
PDLIM7GeneProductENSG00000196923 (Ensembl Human)
PICALMGeneProductENSG00000073921 (Ensembl Human)
PISDGeneProductENSG00000100141 (Ensembl Human)
PKM2GeneProductENSG00000067225 (Ensembl Human)
PODXLGeneProductENSG00000128567 (Ensembl Human)
POLD2GeneProductENSG00000106628 (Ensembl Human)
POLR2CGeneProductENSG00000102978 (Ensembl Human)
POM121GeneProductENSG00000135213 (Ensembl Human)
PPP1R7GeneProductENSG00000115685 (Ensembl Human)
PRPF40AGeneProductENSG00000196504 (Ensembl Human)
PTMAGeneProductENSG00000187514 (Ensembl Human)
PWP1GeneProductENSG00000136045 (Ensembl Human)
PXDNGeneProductENSG00000130508 (Ensembl Human)
RAB34GeneProductENSG00000109113 (Ensembl Human)
RAI14GeneProductENSG00000039560 (Ensembl Human)
RARSGeneProductENSG00000113643 (Ensembl Human)
RHEBGeneProductENSG00000106615 (Ensembl Human)
RTN4GeneProductENSG00000115310 (Ensembl Human)
SDCBPGeneProductENSG00000137575 (Ensembl Human)
SEC23AGeneProductENSG00000100934 (Ensembl Human)
SFRS9GeneProductENSG00000111786 (Ensembl Human)
SH3BGRL3GeneProductENSG00000142669 (Ensembl Human)
SH3BP4GeneProductENSG00000130147 (Ensembl Human)
SLC12A2GeneProductENSG00000064651 (Ensembl Human)
SLC38A1GeneProductENSG00000111371 (Ensembl Human)
SLC38A2GeneProductENSG00000134294 (Ensembl Human)
SLC4A10GeneProductENSG00000144290 (Ensembl Human)
SMAD1GeneProductENSG00000170365 (Ensembl Human)
SPCS3GeneProductENSG00000129128 (Ensembl Human)
SPTLC1GeneProductENSG00000090054 (Ensembl Human)
SRPRBGeneProductENSG00000144867 (Ensembl Human)
SYNE2GeneProductENSG00000054654 (Ensembl Human)
TBCAGeneProductENSG00000171530 (Ensembl Human)
TGFB1GeneProductENSG00000105329 (Ensembl Human)
TGFBR2GeneProductENSG00000163513 (Ensembl Human)
THBS1 GeneProductENSG00000137801 (Ensembl Human)
THBS1GeneProductENSG00000137801 (Ensembl Human)
TICAM2GeneProductENSG00000134970 (Ensembl Human)
TMED10GeneProductENSG00000170348 (Ensembl Human)
TMED2GeneProductENSG00000086598 (Ensembl Human)
TMED7GeneProductENSG00000134970 (Ensembl Human)
TMEM43GeneProductENSG00000170876 (Ensembl Human)
TMEM59GeneProductENSG00000116209 (Ensembl Human)
TNFRSF10BGeneProductENSG00000120889 (Ensembl Human)
TPM1GeneProductENSG00000140416 (Ensembl Human)
TPM3GeneProductENSG00000143549 (Ensembl Human)
TRAM1GeneProductENSG00000067167 (Ensembl Human)
TXNRD1GeneProductENSG00000198431 (Ensembl Human)
UBE2J1GeneProductENSG00000198833 (Ensembl Human)
UBE2V1GeneProductENSG00000124208 (Ensembl Human)
VCAM1GeneProductENSG00000162692 (Ensembl Human)
VEZT / vezatinGeneProductENSG00000028203 (Ensembl Human)
YWHAQGeneProductENSG00000134308 (Ensembl Human)
tuba3GeneProductENSG00000167552 (Ensembl Human)

Annotated Interactions

No annotated interactions

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