Tissue fate map (Homo sapiens)

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Nodose NucleusParietal LobeFetal LungsAnal CanalFetal BrainSomatic MesodermSubstantia Nigra ReticulataHeartPleuraPituitary GlandVulvaStroma of GonadsStomach CardiacFallopian TubeCerebral CortexCD8+EpimyocardiumPenisCD14+Joint Tissue SynoviumAllantoisGlobus PallidusSkull and Branchial CartilagesPonsFetal Adrenal CortexTongue Main CorpusLungsMiddle earBronchiMesendodermOccipital LobeMesentariesThymusFetal Large IntestineNeural ProgenitorSubthalamic NucleusCaudateLateral MesodermMotor Spinal Nerve RootsHemangioblastic Stem CellsMyeloid ProgenitorMesonephric DuctsFetal PancreasAxial SkeletonMidbrainAmygdalaThalamus Lateral NucleiOsteoblastsPlacentaTonsillar RecessesVena CavaArm MuscleEpicardiumFetal HeartKidneyThalamus Subthalamic NucleusVentral Tegmental AreaSplanchnic MesodermCerebellar HemisphereNK CellsDorsal Root GangliaEsophagusEctoderm ProgenitorSmooth Muscle CellsHindbrainBone MarrowBlastocystSynovial MembraneChondrocytesCerebellumVaginaHematopoietic ProgenitorCervixCortexCrainial Motor NervesCephalic Connective tissueHypothalamusDermatomesAdipose TissueNippleDorsal-Paraxial MesodermParathyroidsTemporal LobeMedulla of AdrenalSubcorticalVentral MesodermOuter Layers of EyeProstate GlandVas DeferensOuter Epithelium of BodyOligodendrocyte ProgenitorSmall Intestine JejunumNailsPancreasTeeth EnamelTongueMesoderm ProgentiorHead MesenchymePrefrontal CortexConnective TissueVisceral PeritoneumPathwayPrimitive GutGlial CellsMullerian DuctsSkinSubcutaneous TissueRetrocervical InfiltrateCorpus CallosumHypophysis Anteriror LobeSympathetic GangliaSensory Sinal Nerve RootsMesenchymeHead MusclesVisceraColon CecumCD4+ForebrainSebacious GlandsStomach PyloricOmental AdiposeEndothelium of Blood VesselsGloubus Pallidum ExternalTracheaEpididymisFetal Leg MuscleFetal Arm MusclePeritoneumUrinary BladderAstrocyte ProgenitorKidney MedullaCholinergic ProgenitorTongue Superior With PapillaeEndothelial CellsPericardiumTrigeminal GangliaDeltoid MuscleAuditory VescicleBreastNasal-Olfactory EpitheliumFetal ThymusZygoteOvariesPharyngeal PouchesMyoblastSpinal Dorsal Root GangliaCD34+EndometriumSmall IntestineAdipocyte ProgenitorOral MucosaFrontal CortexLymph NodesSubstantia Nigra Pars CompactaCerebellar VermisSyncytiotrophoblastUrethraSubstantia NigraVisceral PleuraBrainGloubus Pallidum InternalNeural Crest Mesenchymal Stem CellsCytotrophoblastDopaminergic ProgenitorT CellsConnective Tissue Layers of SkinNeural Stem CellsSchwann Cell ProgenitorMyometriumOviductsPharynxPars Neuralis of HypophysisSpinal CordNeural TubeMicroglia ProgenitorPutamenErythroblast ProgenitorStomodaeal EpitheliumHairItermediate MesodermFetal ThyroidMyocardiumB CellsEndocardiumOral EpitheliumFetal Sinal CordAppendage MusclesSaphenous VeinVentricleFetal Small IntestineSerotonergic ProgenitorGlutamatergic ProgenitorTestiesHippocampusBlood VesselsSmall Intestine DuodenumScleroteomesTrophoectodermFrontal LobeBlood CorpusclesStomachAccumbensSpleenMammary GlandsFetal LiverAortaCranial Sensory Ganglia and NervesVestibular Nuclei SuperiorKeratinocytesThyroidMyotubeFetal KidneyPharyngeal MucosaAppendecular SkeletonSweat GlandsMonocytesTonsilDentin of TeethDigestive TubeStomach FundusKidney CortexPluripotent Stem CellCoronary ArteryRetina and Optic NerveProstateLeg MuscleEye LensLiverGABAergic ProgenitorLarge IntestineEarly Endoderm ProgentiorThalamusUterusMedullaMorulaHemangioblast TissueLymphoid ProgentiorGranulocytesAtriumMyotomesDorsolateral Prefrontal NeocortexMedial Prefrontal NeocortexOrbital Prefrontal NeocortexBloodMicrogliaSchwann CellsDopaminergicOligodendrocytesSerotonergicAstrocytesGABAergicGlutamatergicCholinergicErythrocytesVentrolateral Prefrontal NeocortexStriatum Putamen and Caudate NucleusParietal Association NeocortexOccipital Visual NeocortexTemporal Auditory NeocortexTemporal Association CortexMediodorsal ThalamusInduced Pluripotent Stem CellFetal Kidney Renal PelvisFetal Kidney Renal PelvisAdipocytesAorta Smooth Muscle CellsHepatocytesAdrenal CortexEndoderm ProgentiorCardiac ProgenitorCardiomyocytesSkeletal MuscleFetal Skeletal MuscleNeural CrestNeural Crest Stem CellsMelanocyteMotor Somatosensory NeocortexBone Marrow Stem CellsBone Marrow Mesenchymal Stem CellsChorionEpithelial CellsFibroblastsEmbryo Day 8.5Embryo Day 9.5Embryo Day 11.5Left AtriumRight AtriumLeft VentricleRight VentricleIslet CellsThymocytesMuscleEmbryoBone Marrow Hematopoietic ProgenitorsSinal Cord


Description

Proposed lineage fate map focusing on (1) adult tissues, (2) fetal tissues, (3) terminally differentiated cells, (5) stem cells and (4) progentior cells. This pathway is currently in progress but will ultimately be a hub to tissue and cell type specific pathways (nodes converted to pathway nodes).

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Bibliography

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History

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127710view20:44, 24 November 2023EweitzStandardize case, fix typos
116656view11:46, 9 May 2021EweitzModified title
87775view11:06, 25 July 2016MirellaKalafatiOntology Term : 'regulatory pathway' added !
62399view02:51, 28 April 2013MaintBotCleaned up remaining xref errors
62398view02:48, 28 April 2013MaintBotRemoved datasource from empty xrefs
62397view02:47, 28 April 2013MaintBotUpdating GPML version
57682view20:50, 31 January 2013KhanspersModified categories
54699view12:45, 7 December 2012Andra
54698view12:37, 7 December 2012AndraRDFTidy
47899view19:14, 17 April 2012NsalomonisSpecify description
47898view19:14, 17 April 2012NsalomonisSpecify description
47897view19:11, 17 April 2012NsalomonisSpecify description
47896view18:57, 17 April 2012NsalomonisSpecify description
47895view18:50, 17 April 2012NsalomonisSpecify description
47894view18:47, 17 April 2012NsalomonisSpecify description
47893view18:44, 17 April 2012NsalomonisPeriodical save, work in progress
47892view18:33, 17 April 2012NsalomonisPeriodical save, work in progress
47891view18:29, 17 April 2012NsalomonisSpecify description
47890view18:23, 17 April 2012NsalomonisPeriodical save, work in progress
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47868view06:59, 16 April 2012NsalomonisSpecify description
47867view06:55, 16 April 2012NsalomonisSpecify description
47866view06:49, 16 April 2012NsalomonisPeriodical save, work in progress
47865view06:43, 16 April 2012NsalomonisSpecify description
47864view06:31, 16 April 2012NsalomonisPeriodical save, work in progress
47863view06:21, 16 April 2012NsalomonisPeriodical save, work in progress
47862view06:11, 16 April 2012NsalomonisPeriodical save, work in progress
47861view06:04, 16 April 2012Nsalomonislayout
47858view19:23, 15 April 2012NsalomonisSpecify description
47857view17:41, 15 April 2012NsalomonisPeriodical save, work in progress
45929view00:10, 29 November 2011NsalomonisModified description
45928view00:10, 29 November 2011NsalomonisModified description
45927view00:09, 29 November 2011NsalomonisModified description
45926view00:08, 29 November 2011NsalomonisModified description
45925view00:08, 29 November 2011NsalomonisModified description
45924view00:07, 29 November 2011NsalomonisModified description
45917view21:21, 27 November 2011NsalomonisSpecify description
45845view16:03, 17 November 2011NsalomonisSpecify description
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45728view23:33, 2 November 2011NsalomonisSpecify description
45727view23:28, 2 November 2011NsalomonisSpecify description
45723view19:14, 2 November 2011NsalomonisSpecify description

External references

DataNodes

View all...
NameTypeDatabase referenceComment
Accumbens
Adipocyte Progenitor
Adipocytes
Adipose Tissue
Adrenal Cortex
Allantois
Amygdala
Anal Canal
Aorta Smooth Muscle Cells
Aorta
Appendage Muscles
Appendecular Skeleton
Arm Muscle
Astrocyte Progenitor
Astrocytes
Atrium
Auditory Vescicle
Axial Skeleton
B Cells
Blastocyst
Blood Corpuscles
Blood Vessels
Blood
Bone Marrow Hematopoietic Progenitors
Bone Marrow Mesenchymal Stem Cells
Bone Marrow Stem Cells
Bone Marrow
Brain
Breast
Bronchi
CD14+
CD34+
CD4+
CD8+
Cardiac Progenitor
Cardiomyocytes
Caudate
Cephalic Connective tissue
Cerebellar Hemisphere
Cerebellar Vermis
Cerebellum
Cerebral Cortex
Cervix
Cholinergic Progenitor
Cholinergic
Chondrocytes
Chorion
Colon Cecum
Connective Tissue Layers of Skin
Connective Tissue
Coronary Artery
Corpus Callosum
Cortex
Crainial Motor Nerves
Cranial Sensory Ganglia and Nerves
Cytotrophoblast
Deltoid Muscle
Dentin of Teeth
Dermatomes
Digestive Tube
Dopaminergic Progenitor
Dopaminergic
Dorsal Root Ganglia
Dorsal-Paraxial Mesoderm
Dorsolateral Prefrontal Neocortex
Early Endoderm Progentior
Ectoderm Progenitor
Embryo Day 11.5
Embryo Day 8.5
Embryo Day 9.5
Embryo
Endocardium
Endoderm Progentior
Endometrium
Endothelial Cells
Endothelium of Blood Vessels
Epicardium
Epididymis
Epimyocardium
Epithelial Cells
Erythroblast Progenitor
Erythrocytes
Esophagus
Eye Lens
Fallopian Tube
Fetal Adrenal Cortex
Fetal Arm Muscle
Fetal Brain
Fetal Heart
Fetal Kidney Renal Pelvis
Fetal Kidney
Fetal Large Intestine
Fetal Leg Muscle
Fetal Liver
Fetal Lungs
Fetal Pancreas
Fetal Sinal Cord
Fetal Skeletal Muscle
Fetal Small Intestine
Fetal Thymus
Fetal Thyroid
Fibroblasts
Forebrain
Frontal Cortex
Frontal Lobe
GABAergic Progenitor
GABAergic
Glial Cells
Globus Pallidus
Gloubus Pallidum External
Gloubus Pallidum Internal
Glutamatergic Progenitor
Glutamatergic
Granulocytes
Hair
Head Mesenchyme
Head Muscles
Heart
Hemangioblast Tissue
Hemangioblastic Stem Cells
Hematopoietic Progenitor
Hepatocytes
Hindbrain
Hippocampus
Hypophysis Anteriror Lobe
Hypothalamus
Induced Pluripotent Stem Cell
Islet Cells
Itermediate Mesoderm
Joint Tissue Synovium
Keratinocytes
Kidney Cortex
Kidney Medulla
Kidney
Large Intestine
Lateral Mesoderm
Left Atrium
Left Ventricle
Leg Muscle
Liver
Lungs
Lymph Nodes
Lymphoid Progentior
Mammary Glands
Medial Prefrontal Neocortex
Mediodorsal Thalamus
Medulla of Adrenal
Medulla
Melanocyte
Mesenchyme
Mesendoderm
Mesentaries
Mesoderm Progentior
Mesonephric Ducts
Microglia Progenitor
Microglia
Midbrain
Middle ear
Monocytes
Morula
Motor Somatosensory Neocortex
Motor Spinal Nerve Roots
Mullerian Ducts
Muscle
Myeloid Progenitor
Myoblast
Myocardium
Myometrium
Myotomes
Myotube
NK Cells
Nails
Nasal-Olfactory Epithelium
Neural Crest Mesenchymal Stem Cells
Neural Crest Stem Cells
Neural Crest
Neural Progenitor
Neural Stem Cells
Neural Tube
Nipple
Nodose Nucleus
Occipital Lobe
Occipital Visual Neocortex
Oligodendrocyte Progenitor
Oligodendrocytes
Omental Adipose
Oral Epithelium
Oral Mucosa
Orbital Prefrontal Neocortex
Osteoblasts
Outer Epithelium of Body
Outer Layers of Eye
Ovaries
Oviducts
Pancreas
Parathyroids
Parietal Association Neocortex
Parietal Lobe
Pars Neuralis of Hypophysis
Pathway
Penis
Pericardium
Peritoneum
Pharyngeal Mucosa
Pharyngeal Pouches
Pharynx
Pituitary Gland
Placenta
Pleura
Pluripotent Stem Cell
Pons
Prefrontal Cortex
Primitive Gut
Prostate Gland
Prostate
Putamen
Retina and Optic Nerve
Retrocervical Infiltrate
Right Atrium
Right Ventricle
Saphenous Vein
Schwann Cell Progenitor
Schwann Cells
Scleroteomes
Sebacious Glands
Sensory Sinal Nerve Roots
Serotonergic Progenitor
Serotonergic
Sinal Cord
Skeletal Muscle
Skin
Skull and Branchial Cartilages
Small Intestine Duodenum
Small Intestine Jejunum
Small Intestine
Smooth Muscle Cells
Somatic Mesoderm
Spinal Cord
Spinal Dorsal Root Ganglia
Splanchnic Mesoderm
Spleen
Stomach Cardiac
Stomach Fundus
Stomach Pyloric
Stomach
Stomodaeal Epithelium
Striatum Putamen and Caudate Nucleus
Stroma of Gonads
Subcortical
Subcutaneous Tissue
Substantia Nigra Pars Compacta
Substantia Nigra Reticulata
Substantia Nigra
Subthalamic Nucleus
Sweat Glands
Sympathetic Ganglia
Syncytiotrophoblast
Synovial Membrane
T Cells
Teeth Enamel
Temporal Association Cortex
Temporal Auditory Neocortex
Temporal Lobe
Testies
Thalamus Lateral Nuclei
Thalamus Subthalamic Nucleus
Thalamus
Thymocytes
Thymus
Thyroid
Tongue Main Corpus
Tongue Superior With Papillae
Tongue
Tonsil
Tonsillar Recesses
Trachea
Trigeminal Ganglia
Trophoectoderm
Urethra
Urinary Bladder
Uterus
Vagina
Vas Deferens
Vena Cava
Ventral Mesoderm
Ventral Tegmental Area
Ventricle
Ventrolateral Prefrontal Neocortex
Vestibular Nuclei Superior
Viscera
Visceral Peritoneum
Visceral Pleura
Vulva
Zygote

Annotated Interactions

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