G1 to S cell cycle control (Rattus norvegicus)

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1Cell cycle DNA replication genesepuG1/S Cell CycleDNA replicationG1 CyclinDependant Cyclasesinactivephosphorylation of proteinsinvolved in G1/S transitionpcakpTTTCC/GCGCCheckpointorigin recognition complexG2 Phase-M phasedp1Cyclin DsG1 PhaseG1/S transition CyclinDependent KinasesuE2fpG1/S transition PhaseRbbbDegradationeCyclin EsDNA polymerasespupOrc4lE2fRb1E2f6Cdkn2aRpa3Cdkn1cCcnb1Rpa2Cdk4Cdk6Cdk6Ccne2Tp53E2f1Orc2lAtf6bCyclinDCDKCreb1Orc1lOrc3lTfdp2Ccne1Cdkn2cMcm2Rb1CdkCDKN2DE2f3Creb3l4CyclinDAtmPcnaRpa1Cdk2TFDP1Cdk7Rbl1CcnhMycOrc6lCdk1Creb3l3Mdm2Ccnd3CDC2ACdk7Prim2Rb1Mcm6TFDP1E2fE2F2Mcm7Cdc25aCdkn1bMcm5Ccne1Cdk4PoleMcm3Cdc45lCdkCcnd2PRIM1Ccnd1Creb3E2F4Cdkn2bE2f5Pola2Mnat1Mcm4Ccne1Ccna1CDKCdkn1aPole2Wee1Gadd45aTp53Creb3l1Orc5lMyt1Ccng2


Description

In the G1 phase there are two types of DNA damage responses, the p53-dependent and the p53-independent pathways. The p53-dependent responses inhibit CDKs through the up-regulation of genes encoding CKIs mediated by the p53 protein, whereas the p53-independent mechanisms inhibit CDKs through the inhibitory T14Y15 phosphorylation of Cdk2. Failure of DNA damage checkpoints in G1 leads to mutagenic replication of damaged templates and other replication defects. Source: Reactome http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&FOCUS_SPECIES=Homo%20sapiens&ID=69615&

Comments

GenMAPP notes 
Adapted from http://www.genomeknowledge.org/, and Maeda et al. Journal of Invest Dermatol. 2002. 119:22-26.
HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP45(r20771) with a 83% conversion rate.

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Bibliography

  1. Maeda T, Hanna AN, Sim AB, Chua PP, Chong MT, Tron VA; ''GADD45 regulates G2/M arrest, DNA repair, and cell death in keratinocytes following ultraviolet exposure.''; J Invest Dermatol, 2002 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
95749view13:54, 19 January 2018MkutmonHomology conversion update
71777view20:31, 17 October 2013MaintBotAutomated update of data sources
69353view18:53, 8 July 2013MaintBotUpdated to 2013 gpml schema
67267view10:29, 26 June 2013Christine ChichesterOntology Term : 'G1/S DNA damage checkpoint pathway' added !
47766view05:20, 6 April 2012Khanspersupdated xrefs
41665view02:35, 2 March 2011MaintBotRemoved redundant pathway information and comments
35823view21:56, 17 February 2010KhanspersAdded lit ref
35822view21:55, 17 February 2010KhanspersModified description
34060view19:05, 9 December 2009MaintBotAutomatic update of empty xrefs
32403view17:03, 15 August 2009MaintBotFixed text labels
32058view13:33, 14 August 2009MaintBotFixed group labels
31434view21:03, 13 August 2009MaintBotFixed text labels
31019view01:07, 30 July 2009MaintBotConverted from Homo sapiens
21409view11:31, 14 November 2008MaintBot[[Pathway:Rattus norvegicus:G1 to S cell cycle Reactome]] moved to [[Pathway:WP348]]: Moved to stable identifier
8070view13:46, 7 January 2008MaintBot[[Pathway:Rat:G1 to S cell cycle Reactome]] moved to [[Pathway:Rattus norvegicus:G1 to S cell cycle Reactome]]: Renaming species
7657view16:07, 18 December 2007MaintBotfixed category names
7228view12:41, 4 November 2007MaintBotAdded categories to GPML
6544view22:20, 22 May 2007A.C.Zambongpml file for [[Rat:G1_to_S_cell_cycle_Reactome]]

External references

DataNodes

View all...
NameTypeDatabase referenceComment
Atf6bGeneProduct406169 (Entrez Gene)
AtmGeneProduct300711 (Entrez Gene)
CDC2AGeneProduct
CDKGeneProduct
CDKN2DGeneProduct494444 (Entrez Gene)
Ccna1GeneProduct295052 (Entrez Gene)
Ccnb1GeneProduct25203 (Entrez Gene)
Ccnd1GeneProduct58919 (Entrez Gene)
Ccnd2GeneProduct64033 (Entrez Gene)
Ccnd3GeneProduct25193 (Entrez Gene)
Ccne1GeneProduct25729 (Entrez Gene)
Ccne2GeneProduct362485 (Entrez Gene)
Ccng2GeneProduct29157 (Entrez Gene)
CcnhGeneProduct84389 (Entrez Gene)
Cdc25aGeneProduct171102 (Entrez Gene)
Cdc45lGeneProduct287961 (Entrez Gene)
CdkGeneProduct
Cdk1GeneProduct54237 (Entrez Gene)
Cdk2GeneProduct362817 (Entrez Gene)
Cdk4GeneProduct94201 (Entrez Gene)
Cdk6GeneProduct114483 (Entrez Gene)
Cdk7GeneProduct171150 (Entrez Gene)
Cdkn1aGeneProduct114851 (Entrez Gene)
Cdkn1bGeneProduct83571 (Entrez Gene)
Cdkn1cGeneProduct246060 (Entrez Gene)
Cdkn2aGeneProduct25163 (Entrez Gene)
Cdkn2bGeneProduct25164 (Entrez Gene)
Cdkn2cGeneProduct54238 (Entrez Gene)
Creb1GeneProduct81646 (Entrez Gene)
Creb3GeneProduct298400 (Entrez Gene)
Creb3l1GeneProduct362165 (Entrez Gene)
Creb3l3GeneProduct314638 (Entrez Gene)
Creb3l4GeneProduct310616 (Entrez Gene)
CyclinDGeneProduct
E2F2GeneProduct
E2F4GeneProduct307794 (Entrez Gene)
E2fGeneProduct
E2f1GeneProduct399489 (Entrez Gene)
E2f3GeneProduct291105 (Entrez Gene)
E2f5GeneProduct116651 (Entrez Gene)
E2f6GeneProduct313978 (Entrez Gene)
Gadd45aGeneProduct25112 (Entrez Gene)
Mcm2GeneProduct312538 (Entrez Gene)
Mcm3GeneProduct316273 (Entrez Gene)
Mcm4GeneProduct29728 (Entrez Gene)
Mcm5GeneProduct291885 (Entrez Gene)
Mcm6GeneProduct29685 (Entrez Gene)
Mcm7GeneProduct288532 (Entrez Gene)
Mdm2GeneProduct314856 (Entrez Gene)
Mnat1GeneProduct266713 (Entrez Gene)
MycGeneProduct24577 (Entrez Gene)
Myt1GeneProduct362291 (Entrez Gene)
Orc1lGeneProduct313479 (Entrez Gene)
Orc2lGeneProduct301430 (Entrez Gene)
Orc3lGeneProduct313138 (Entrez Gene)
Orc4lGeneProduct295596 (Entrez Gene)
Orc5lGeneProduct362304 (Entrez Gene)
Orc6lGeneProduct291927 (Entrez Gene)
PRIM1GeneProduct246327 (Entrez Gene)
PcnaGeneProduct25737 (Entrez Gene)
Pola2GeneProduct85242 (Entrez Gene)
Pole2GeneProduct299112 (Entrez Gene)
PoleGeneProduct304573 (Entrez Gene)
Prim2GeneProduct301323 (Entrez Gene)
Rb1GeneProduct24708 (Entrez Gene)
Rbl1GeneProduct680111 (Entrez Gene)
Rpa1GeneProduct287524 (Entrez Gene)
Rpa2GeneProduct59102 (Entrez Gene)
Rpa3GeneProduct296883 (Entrez Gene)
TFDP1GeneProduct
Tfdp2GeneProduct300947 (Entrez Gene)
Tp53GeneProduct24842 (Entrez Gene)
Wee1GeneProduct308937 (Entrez Gene)

Annotated Interactions

No annotated interactions
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