Initiation of transcription and translation elongation at the HIV-1 LTR (Homo sapiens)
From WikiPathways
Description
Following cellular activation or drug treatment, NFAT and NF-kB translocate to the nucleus and bind sites at the HIV-1 LTR. NFAT and NF-kB recruit p300/CBP to the LTR, resulting in acetylation of histone tails and transcriptional activation. In the case of NF-kB, proteosomal degradation of IkBa permits NF-kB translocation and displacement of the p50 homodimers. This is followed by Tat- dependent elongation in which Tat recruits the P-TEFb complex to TAR. Cdk9 phosphorylates the CTD of RNA Pol II, resulting in increased processivity. P-TEFb phosphorylates DSIF and NELF, resulting in removal of NELF from Pol II and converting DSIF into a positive elongation factor, thereby promoting productive elongation.
Data nodes in blue represent HIV proteins.
Quality Tags
Ontology Terms
Bibliography
- Ruelas DS, Greene WC; ''An integrated overview of HIV-1 latency.''; Cell, 2013 PubMed Europe PMC Scholia
History
View all... |
External references
DataNodes
View all... |
Name | Type | Database reference | Comment |
---|---|---|---|
CBP | GeneProduct | ENSG00000005339 (Ensembl) | |
CDK9 | GeneProduct | ENSG00000136807 (Ensembl) | |
Calcineurin complex | GeneProduct | ||
CycT1 | GeneProduct | ENSG00000129315 (Ensembl) | |
HDAC | GeneProduct | ||
HEXIM1 | GeneProduct | ENSG00000186834 (Ensembl) | |
HMBA | Metabolite | HMDB41901 (HMDB) | |
Histones | GeneProduct | ||
IKBA | GeneProduct | ENSG00000100906 (Ensembl) | |
NELFA | GeneProduct | ENSG00000185049 (Ensembl) | |
NELFB | GeneProduct | ENSG00000188986 (Ensembl) | |
NELFCD | GeneProduct | ENSG00000101158 (Ensembl) | |
NELFE | GeneProduct | 7936 (Entrez Gene) | |
NFATC1 | GeneProduct | ENSG00000131196 (Ensembl) | |
NFATC2 | GeneProduct | ENSG00000101096 (Ensembl) | |
NFATC3 | GeneProduct | ENSG00000072736 (Ensembl) | |
NFATC4 | GeneProduct | ENSG00000100968 (Ensembl) | |
Prostratin | Metabolite | 399975 (Chemspider) | |
RELA | GeneProduct | ENSG00000173039 (Ensembl) | |
RNA Pol II | GeneProduct | ||
SP1 | GeneProduct | ENSG00000185591 (Ensembl) | |
SUPT4H1 | GeneProduct | ENSG00000213246 (Ensembl) | |
SUPT5H | GeneProduct | ENSG00000196235 (Ensembl) | |
Tat | GeneProduct | ||
Ubiquitin | GeneProduct | ||
p300 | GeneProduct | ENSG00000100393 (Ensembl) | |
p50 | GeneProduct | ENSG00000109320 (Ensembl) |
Annotated Interactions
No annotated interactions