Pre-implantation embryo (Homo sapiens)

From WikiPathways

Description

Quality Tags

Ontology Terms

Bibliography

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1. Houbaviy HB, Murray MF, Sharp PA; ''Embryonic stem cell-specific MicroRNAs.''; Dev Cell, 2003 PubMed Europe PMC Scholia
2. Bell CE, Calder MD, Watson AJ; ''Genomic RNA profiling and the programme controlling preimplantation mammalian development.''; Mol Hum Reprod, 2008 PubMed Europe PMC Scholia
3. Zernicka-Goetz M, Morris SA, Bruce AW; ''Making a firm decision: multifaceted regulation of cell fate in the early mouse embryo.''; Nat Rev Genet, 2009 PubMed Europe PMC Scholia
4. Theunissen TW, Powell BE, Wang H, Mitalipova M, Faddah DA, Reddy J, Fan ZP, Maetzel D, Ganz K, Shi L, Lungjangwa T, Imsoonthornruksa S, Stelzer Y, Rangarajan S, D'Alessio A, Zhang J, Gao Q, Dawlaty MM, Young RA, Gray NS, Jaenisch R; ''Systematic identification of culture conditions for induction and maintenance of naive human pluripotency.''; Cell Stem Cell, 2014 PubMed Europe PMC Scholia
5. Yan L, Yang M, Guo H, Yang L, Wu J, Li R, Liu P, Lian Y, Zheng X, Yan J, Huang J, Li M, Wu X, Wen L, Lao K, Qiao J, Tang F; ''Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells.''; Nat Struct Mol Biol, 2013 PubMed Europe PMC Scholia
6. Deb K, Sivaguru M, Yong HY, Roberts RM; ''Cdx2 gene expression and trophectoderm lineage specification in mouse embryos.''; Science, 2006 PubMed Europe PMC Scholia
7. Lin SL, Chang DC, Lin CH, Ying SY, Leu D, Wu DT; ''Regulation of somatic cell reprogramming through inducible mir-302 expression.''; Nucleic Acids Res, 2011 PubMed Europe PMC Scholia

History

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Compare	Revision	Action	Time	User	Comment
	126527	view	19:51, 24 May 2023	Khanspers	removed incorrect pathway ontology tag
	120810	view	12:37, 11 January 2022	Susan	Ontology Term : 'signaling pathway pertinent to development' added !
	120809	view	12:34, 11 January 2022	Susan	Ontology Term : 'altered regulatory pathway pertinent to the brain' added !
	116646	view	11:38, 9 May 2021	Eweitz	Modified title
	106534	view	23:59, 5 September 2019	Khanspers	Modified description
	105790	view	19:48, 15 August 2019	Khanspers	Modified description
	94671	view	13:41, 4 October 2017	Marvin M2	Connected unconnected lines
	88345	view	16:10, 1 August 2016	Fehrhart	Ontology Term : 'regulatory pathway' added !
	87387	view	11:05, 22 July 2016	MaintBot	added missing graphids
	84571	view	12:27, 3 March 2016	Mkutmon	added missing graph ids
	83782	view	15:38, 4 December 2015	Susan	Changed IDs of POU5F1 and PADI6
	82555	view	18:28, 6 October 2015	Khanspers	Modified description
	82554	view	18:07, 6 October 2015	Khanspers	Added literature reference
	82553	view	18:05, 6 October 2015	Khanspers	Modified description
	82552	view	18:04, 6 October 2015	Khanspers	Modified description
	82551	view	18:01, 6 October 2015	Khanspers	Updating to latest version per Nathan
	82539	view	11:32, 6 October 2015	Mkutmon	added Ensembl identifier for FOXD1
	82473	view	16:43, 30 September 2015	Nsalomonis	New pathway

External references

DataNodes

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Name	Type	Database reference	Comment
AQP3	GeneProduct	ENSG00000165272 (Ensembl)
AQP9	GeneProduct	ENSG00000103569 (Ensembl)
ARGFX	GeneProduct	ENSG00000186103 (Ensembl)
ATP1A1	GeneProduct	ENSG00000163399 (Ensembl)
BARX2	GeneProduct	ENSG00000043039 (Ensembl)
BATF3	GeneProduct	ENSG00000123685 (Ensembl)
CDH1	GeneProduct	ENSG00000039068 (Ensembl)
CDX2	GeneProduct	ENSG00000165556 (Ensembl)
CELF3	GeneProduct	ENSG00000159409 (Ensembl)
DDIT3	GeneProduct	ENSG00000175197 (Ensembl)
DLX2	GeneProduct	ENSG00000115844 (Ensembl)
DNMT3L	GeneProduct	ENSG00000142182 (Ensembl)
DPPA3	GeneProduct	ENSG00000187569 (Ensembl)
DPRX	GeneProduct	ENSG00000204595 (Ensembl)
E2F5	GeneProduct	ENSG00000133740 (Ensembl)
EGR1	GeneProduct	ENSG00000120738 (Ensembl)
ELAVL1	GeneProduct	ENSG00000066044 (Ensembl)
ESRRA	GeneProduct	ENSG00000173153 (Ensembl)
FOSB	GeneProduct	ENSG00000125740 (Ensembl)
FOXD1	GeneProduct	ENSG00000251493 (Ensembl)
FOXQ1	GeneProduct	ENSG00000164379 (Ensembl)
GATA2	GeneProduct	ENSG00000179348 (Ensembl)
GATA3	GeneProduct	ENSG00000107485 (Ensembl)
H2AFY2	GeneProduct	ENSG00000099284 (Ensembl)
HMGA1	GeneProduct	ENSG00000137309 (Ensembl)
HNRNPAB	GeneProduct	ENSG00000197451 (Ensembl)
IRF4	GeneProduct	ENSG00000137265 (Ensembl)
IRX5	GeneProduct	ENSG00000176842 (Ensembl)
KHSRP	GeneProduct	ENSG00000088247 (Ensembl)
KLF4	GeneProduct	ENSG00000136826 (Ensembl)
LEUTX	GeneProduct	ENSG00000213921 (Ensembl)
MIR290	Rna
MIR295	Rna
MIR302A	Rna	ENSG00000207927 (Ensembl)
MOS	GeneProduct	ENSG00000172680 (Ensembl)
MTA3	GeneProduct	ENSG00000057935 (Ensembl)
MXD1	GeneProduct	ENSG00000059728 (Ensembl)
MYBL1	GeneProduct	ENSG00000185697 (Ensembl)
NANOG	GeneProduct	ENSG00000111704 (Ensembl)
NANOGNB	GeneProduct	ENSG00000205857 (Ensembl)
NKX2-1	GeneProduct	ENSG00000136352 (Ensembl)
NLRP5	GeneProduct	ENSG00000171487 (Ensembl)
NR3C2	GeneProduct	ENSG00000151623 (Ensembl)
PADI6	GeneProduct	ENSG00000256049 (Ensembl)
PBX1	GeneProduct	ENSG00000185630 (Ensembl)
POU5F1	GeneProduct	ENSG00000206454 (Ensembl)
SIX3	GeneProduct	ENSG00000138083 (Ensembl)
SMARCA4	GeneProduct	ENSG00000127616 (Ensembl)
SOX11	GeneProduct	ENSG00000176887 (Ensembl)
SOX2	GeneProduct	ENSG00000181449 (Ensembl)
SOX8	GeneProduct	ENSG00000005513 (Ensembl)
TBX3	GeneProduct	ENSG00000135111 (Ensembl)
TCF7L1	GeneProduct	ENSG00000152284 (Ensembl)
TEAD4	GeneProduct	ENSG00000197905 (Ensembl)
TFAP2B	GeneProduct	ENSG00000008196 (Ensembl)
TPRX1	GeneProduct	ENSG00000178928 (Ensembl)
ZAR1	GeneProduct	ENSG00000182223 (Ensembl)
ZFP36	GeneProduct	ENSG00000128016 (Ensembl)
ZFP36L2	GeneProduct	ENSG00000152518 (Ensembl)
ZFP42	GeneProduct	ENSG00000179059 (Ensembl)
ZSCAN4	GeneProduct	ENSG00000180532 (Ensembl)

Annotated Interactions

No annotated interactions