Intra-Golgi and retrograde Golgi-to-ER traffic (Homo sapiens)

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otherCOG-interactingRABsSCOC RIC1:RGP1KIF12 NSF RAB1A BET1L KIF26B intra-Golgicargo:GOLGA5dimer:GOSR1ATPCOPA RAB6:GTPKIF1B CAPZB ATP COG8 VPS53 COG3 RAB33B:GTPBET1L STX6RAB1:GTP:GBF1GDP RAB18 RAB41 COPG2 TMED9 COG1 KDELR1 ADPSYS1 GOSR1 KIF1B ARF1:GTPGOSR1 CYTH1 GTP SEC22B:STX18:USE1L:BNIP1VAMP3 KIF1C DCTN4 COPG1 RAB3GAP1:RAB3GAP2AGPAT3TRIP11 DCTN6 RAB43 coatomerSTX16 SNAP29 KIF5B RGP1 STX10 DYNLL1 USE1 CAPZA1 SURF4 DCTN5 BICD2 NSF hexamerSTX10NAA30 RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3ARF3 NAA38 VTI1AVPS51 TMED2 KIF6 BET1L GCC2 KIF25 KIF26A ATPTMED2 ARF4 RAB43:GDP:USP6NLKLC3 STX10 DCTN5 GTP ARF1 RAB6B MyrG-ARL1 SNAP29 Dynein:Dynactin:microtubules:PAFAH1B1COPZ1 ARF1 AcM-ARFRP1 NAPG BET1L TMED10 MAN1A1 DYNC1H1 AcM-ARFRP1:GTP:SYS1KLC2 TGN Golgin dimersRAB6B STX6:STX16:VTI1ARAB6B COG5 COPZ2 KIF11 M6PR RAB1B RAB6A VAMP3 DCTN2 COG complex:RABsKIF3B RAB6B RAB1B GTP CAPZB COPB2 NAPA KDELR2 ATPDCTN1 PLIN3SEC22B ARCN1 KIF5B KIF20B RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3:RHOBTB3:ATPGTP COPB2 GDP GOSR1 p24 dimersCENPE DYNC1LI1 COG3 RAB9A DCTN6 DCTN2 KIF3A KIF18B STX16 CYTH3 VAMP4 GBF1 DYNC1LI1 KIF1A KIF3B STX16 GALNT1(1-559) VAMP3 RAB1A CAPZA3 COG1 cPLA2sADPTMED9 COPA Golgi-to-ER cargoRAB1:GTP:GBF1:ARF:GTP:coatomerARF5 STX16 AcG-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:TGN Golgin dimersSTX6 COPZ1 STX16TMED7 COG4 ARF1:GTP:TRIP11:cargoKIF20B RAB9:GTP:p-RABEPK:VAMP3:late endosome-to-TGN cargoSYS1 TMED3 COPZ2 KIF13B VAMP3 MAN1A2 COPE USP6NL DYNC1I2 NAPB KDELR1 ZW10 COG6 NAPA KLC1 PAFAH1B1KIFC2 RAB6A RAB1A AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTPKIF21B CAPZB ARF3 ARFRP1:GTPVTI1A GTP VAMP4 GOSR2 SURF4 MyrG-ARL1 GBF1 NBAS TMED3 STX5:PalmC-YKT6:BET1L:GOSR1:NSF hexamer:3xSNAPsBICD1 ATPRAB6A SCOCRAB6:GTP:BICDdimer:COPI-independent retrograde cargo:Dynein:Dynactin:microtubulesGGC-RAB33B NAPG RAB1A GTP TMED2 STX16BET1L COG7 ARF5 STX16 MyrG-ARL1:GTPGDP GDP RAB9A RINT1 MAN1C1 GOSR1VTI1A STX18:USE1L:BNIP1VPS54 RHOBTB3:ATPMicrotubule protofilament ARFGAP2 DYNC1LI1 VPS45 CAPZA2 GOLIM4 NAPB RAB43 VPS54 TRIP11:cargoCOG1 TMED7 CYTH3 RAB1A KLC4 KDELR1 M6PR CYTH4 CYTH1 GCC2 COPB2 COPZ2 GOLGA5 TMED3 RAB1:GTP:GBF1:ARF:GTP:coatomer:p24 dimers:ARFGAPs:SEC22B:cargoCOPG2 RAB6A NAPA SEC22B GCC1 KLC3 ARF1 DYNC1I2 TMED9 KIF27 NAA30:NAA35:NAA38KDELR3 CAPZA1 COG5 RAB1B KDELR3 COG4 pS-RABEPK ARF5 SURF4 GTP COPA GTP RHOBTB3 STX5 GTP GGC-RAB33B KIF26B VPS51 GOSR1 VTI1A COPB1 AcM-ARFRP1 GTP KIFAP3 RAB3GAP2 TGOLN2 COPG2 KIFC1 GDP ARF1 GALNT2(1-571) MyrG-ARL1 GDP DCTN2 CAPZA2 CoA-SHSCOC:MyrG-ARL1:GTPPAFAH1B1 KDELR2 STX18 TMED7 NSF VTI1A KDELR1 COPB1 TMED2 PLA2G6 VAMP4 ACTR10 KIF23 GTP RHOBTB3 TMF1 ARF4 GTP ARFGAP1,2,3Microtubule protofilament COG6 TGOLN2 ARFGAP3 STX18KIF28P 2-lysophosphatidylcholineCOG4 RINT1 GOLGA4 NAPB GOLGA4 STX5Kinesins:microtubuleVAMP4 TRIP11 IGF2R PalmC-YKT6 USE1 COPZ2 COPZ1 MAN2A1 SYS1 SURF4 RAB1A STX10:STX16:VTI1ACOG2 RAB9B RAB1B SEC22B PLA2G4A BICD1 TGOLN2 RAB1:GTP:coatomer:p24 dimers:SEC22B:cargo:NBAS:RINT1:ZW10:STX18:USE1L:BNIP1COPA RAB1:GTP:GBF1:ARF:GDPSEC22BRIC1 STX5 BICD2 AcM-ARFRP1 KIF3A CYTH2 GCC2 KIF3C RACGAP1 KDELR2 Chromokinesin dimers RHOBTB3:ADPCOG7 TMED3 GOLGA1 KLC1 TMED10 VAMP3ALPP GCC1 COPZ2 MAN2A2 KLC4 GOSR1 KDELR2 MAN1A2 COPZ2 GTPSURF4 COG5 KDELR3 KIF13B KIF18A AcM-ARFRP1 KDELR1 RAB1:GTP:coatomer:p24 dimers:SEC22B:cargoRAB9A RAB3GAP2 COG2 M6PR KIF21A RAB3GAP2 RAB39A ADPARF3 KDELR2 RAB18:GDPDCTN1 NBAS GTP COPE VAMP3 CYTH1 COPI-independentGolgi-to-ER cargoGCC2 COPB1 ARFIP2 BNIP1DCTN4 COG8 GBF1 DCTN3 NBAS:RINT1:ZW10NAPA KIF3C RAB33B:GTP:RIC1:RGP1COG6 STX5 ADPGTP DCTN1 KIF18B Ac-CoARGP1 STX16 GTP COPG1 RAB1A GBF1IGF2R STX6:STX16:VTI1A:VAMP4STX16 ARCN1 GTP RAB1A RAB9:GDPPLIN3 GDP MAN1C1 NAPG MAN2A1 pS-RABEPK COG4 RAB3GAP1 GOLGA4 KDELR1 NSF TMED10 RAB1B COG complex:GolgisnaresVPS52 IGF2R TMED7 GTP RAB6A RAB6:GTP:COPI-independent retrograde Golgi-to-ER cargoCOPG2 NAPB USE1 p24 dimersGTP RAB9A MyrG-ARL1 ARF5 RACGAP1 BNIP1 ARF4 NAPG DYNC1I1 TMED7 Microtubule protofilament CYTH3 COG1 COPB1 CAPZA1 SYS1 GDPpS-RABEPK KIF18A NAA35 GDPCYTH2 RAB9B USE1STX6 VTI1A ARF:GDPSTX5 COPB2 COG4 NSF COPA RGP1 GALNT2(1-571) DYNLL1 COG8 DCTN5 STX6 DYNC1I2 GOSR1 COGcomplex:CUX1dimer:GOLGA5dimer:STX5:PalmC-YKT6:BET1L:GOSR1:intra-Golgi retrograde cargoATPRAB30 NAPB pS-RABEPK ARFGAP1 KIF16B RIC1 ADP STX16 CYTH4 RAB9B DYNLL2 ARFIP2:MyrG-ARL1:GTPCOG5 STX5 COPZ1 ARF1:GTP:CYTH1,2,3,4ARF1 PalmC-YKT6 STX6 COG5 ARF1 RAB1B CUX1 M6PR ARCN1 GTP GALNT1(1-559) MyrG-ARL1 NAPG Dynein:Dynactin:microtubuleVTI1A COG5 MAN1A1 SYS1VTI1AGTP PAFAH1B2 KIF5A RAB1B RAB43 KIF21B COG8 ARCN1 KIFC2 NAPB CAPZA2 RAB39A KDELR3 COPZ1 VPS45 CAPZA3 COG2 RAB6:GTP:RIC1:RGP1SEC22B SURF4 KIF9 DCTN3 TMED10 GTP ARFGAP2 STX16 GOLGA5 KIF12 GARP complexTMED2 PAFAH1B1 COPE SEC22BKIF19 NAPB ACTR1A TMF1 COPG2 ARF1 TMF1 DCTN6 GCC2 dimerCOPB2 VPS54 RAB3GAP1:RAB3GAP2:RAB18:GDPGALNT1(1-559) KIF20A GTP GOLGA1 TMED9 TMED9 COG7 TMED10 KIF21A BET1LRAB3GAP1 GTP PalmC-YKT6GDPKLC2 RIC1 M6PR SNAPsRAB1A SNAPsGTPCYTH2 KIF1A GCC1 KIF1C STX10 ATP BNIP1 RAB6B BNIP1 KIF9 KIF28P KIF25 COG4 CENPE TMED2 RAB36 DYNC1LI2 RAB6B earlyendosome-to-TGNcargoRAB9:GTP:p-RABEPK:VAMP3:STX16:STX10:VTI1A:GARP complex:GCC2 dimer:late-endosome-to-TGN cargoCOPB1 COG complexTMED3 ARFGAP3 RAB1A ARFRP1 GTPCOPG1 GTP TMED3 GDP RAB1:GDPKIF27 BICD2 TMED10 STX10 COPZ1 VPS51 GOLGA5 GTP Kinesin-3 dimers RAB9A KIF20A RAB3GAP1:RAB3GAP2:RAB18:GTPGOSR2 RAB1:GTP:coatomer:p24 dimers:SEC22B:kinesins:microtubulesNAPA PalmC-YKT6 COG7 CUX1 dimerCOG7 COPE VTI1A RAB6B KIF6 GOLIM4 DYNC1H1 RIC1 TMED10 TMED2 VAMP4STX5:PalmC-YKT6:BET1LKIF15 DYNC1LI2 PCCOG3 GTP COG8 KIF19 GALNT2(1-571) ZW10 Kinesin-3 dimers ARF1:GDP:CYTH1,2,3,4VPS52 CYTH1,2,3,4STX18 COPG1 KIF5A ARCN1 AcM-ARFRP1 COG2 COG complexNAPA STX16 KIF15 CYTH4 GOLIM4 KDELR3 GTP TMED9 RGP1 NSF COG3 CUX1 RAB1B ACTR10 COG1 AcM-ARFRP1:GTPGTP ARFGAP1 NSF COPG1 ARFIP2RAB30 COPG2 ARF4 BET1L ACTR1A COPE NSF COPG1 ARF4 COG2 KDELR2 RAB6A GBF1 RAB43:GTPMicrotubule protofilament KDELR3 RAB6B DCTN3 COG6 STX:PalmC-YKT6:BET1L:GOSR1RAB36 TMED2 DYNC1I1 MAN2A1 intra-Golgi cargoVTI1A GTP GTP RIC1 NSF hexamerfatty acidMAN1A2 late-endosome-to-TGNcargoIGF2R RAB18 ARF3 GTP COG6 AA-CoAMAN1A1 RAB6:GDP:RIC1:RGP1DYNC1LI2 Chromokinesin dimers RAB6A STX10:STX16:VTI1A:VAMP3:NSF hexamer:SNAPsVPS53 RIC1:RGP1COG8 NAPG ALPP VPS52 RAB3GAP1 KIF23 VPS53 GTP GDP COG1 RAB6:GTP:BICDdimer:COPI-independent retrograde cargoRAB6:GDPKIF11 ACTR1A RABEPKSEC22B:STX18:USE1:BNIP1L:3xSNAPs:NSF hexamerNSF hexamerBNIP1 RAB41 COPE Kinesin-13 dimers VTI1A COG2 RAB1B PalmC-YKT6 GALNT1(1-559) MAN2A2 STX10:STX16:VTI1A:VAMP3RAB1:GTP:GBF1:ARF:GTPGDP RAB18 ARF1 TMED9 RAB1B STX18 USE1 TMED10 TMED9 RAB6:GTP:RIC1:RGP1:GARP complex:COG complex:AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:Golgin dimers:STX6:STX16:VTI1A:VAMP4:early endosome-to-TGN cargoGTP DYNLL2 BICD dimerKinesin-13 dimers NAPA CAPZA3 USP6NLMyrG-ARL1 PiRIC1 COG3 RHOBTB3 COG7 COG3 ARF1 GOLGA5 dimerGTP GALNT2(1-571) RAB6A STX6 SEC22B IGF2R COPB1 VTI1A COPB2 VAMP4:earlyendosome-to-TGNcargoVAMP3 RAB43:GTP:USP6NLGCC2 GTP RAB9B PLIN3 DCTN4 USP6NL Golgi-to-ER cargoTMED7 Microtubule protofilament GOLGA1 SEC22B KIFC1 KIF26A ACTR10 STX18 PAFAH1B3 STX5 RGP1 KIFAP3 CoA-SHMAN2A2 RAB9B GBF1 ARF3 BICD1 STX6 GTP DYNLL1 MAN1C1 DYNC1H1 DYNLL2 COG6 ARF5 DYNC1I1 other COGinteracting snaresKIF16B SNAPsCOPA RGP1 NAPG RAB1:GTPSTX6:STX16:VTI1A:VAMP4:NSF hexamer:3xSNAPs19911058, 14717518618630, 11045


Description

The mammalian Golgi complex, a central hub of both anterograde and retrograde trafficking, is a ribbon of stacked cisterna with biochemically distinct compartments (reviewed in Glick and Nakano, 2009; Szul and Sztul, 2011). Anterograde cargo from the ERGIC and ER is received at the cis-Golgi, trafficked through the medial- and trans-Golgi and released through the trans-Golgi network (TGN) to the endolysosomal system and the plasma membrane. Although still under debate, current models of Golgi trafficking favour the cisternal maturation model, where anterograde cargo remain associated with their original lipid membrane during transit through the Golgi and are exposed to sequential waves of processing enzymes by the retrograde movement of Golgi resident proteins. In this way, cis-cisterna mature to medial- and trans-cisterna as the early acting Golgi enzymes are replaced by later acting ones (reviewed in Pelham, 2001; Storrie, 2005; Glick and Nakano, 2009; Szul and Sztul, 2011). More recently. a kiss-and-run (KAR) model for intra-Golgi trafficking has been proposed, which marries aspects of the cisternal maturation model with a diffusion model of transport (reviewed in Mironov et al, 2103).
Like the anterograde ERGIC-to Golgi transport step, intra-Golgi trafficking between the cisterna appears to be COPI-dependent (Storrie and Nilsson, 2002; Szul and Sztul, 2011). Numerous snares and tethering complexes contribute to the targeting and fusion events that are required to maintain the specificity and directionality of these trafficking events (reviewed in Chia and Gleeson, 2014). Golgi tethers include long coiled coiled proteins like the Golgins, as well as multisubunit tethers like the COG complex. These tethers make numerous interactions with other components of the secretory system including RABs, SNAREs, motor and coat proteins as well as components of the cytoskeleton (reviewed in Munro, 2011; Willet et al, 2013).
Retrograde traffic from the cis-Golgi back to the ERGIC and ER depends on both the COPI-dependent pathway, which appears to be important for recyling of KDEL receptors, and a more recently described COPI-independent pathway that relies on RAB6 (reviewed in Szul and Sztul, 2011; Heffernan and Simpson, 2014). RAB6 and RAB9 also play roles at the TGN side of the Golgi, where they are implicated in the docking of vesicles derived from the endolysosomal system and the plasma membrane (reviewed in Pfeffer, 2011) View original pathway at:Reactome.

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 6811442
Reactome-version 
Reactome version: 65
Reactome Author 
Reactome Author: Rothfels, Karen

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  192. Nagahama M, Orci L, Ravazzola M, Amherdt M, Lacomis L, Tempst P, Rothman JE, Söllner TH.; ''A v-SNARE implicated in intra-Golgi transport.''; PubMed Europe PMC Scholia
  193. Short B, Preisinger C, Schaletzky J, Kopajtich R, Barr FA.; ''The Rab6 GTPase regulates recruitment of the dynactin complex to Golgi membranes.''; PubMed Europe PMC Scholia
  194. Liu S, Hunt L, Storrie B.; ''Rab41 is a novel regulator of Golgi apparatus organization that is needed for ER-to-Golgi trafficking and cell growth.''; PubMed Europe PMC Scholia
  195. Andag U, Neumann T, Schmitt HD.; ''The coatomer-interacting protein Dsl1p is required for Golgi-to-endoplasmic reticulum retrieval in yeast.''; PubMed Europe PMC Scholia
  196. Laufman O, Kedan A, Hong W, Lev S.; ''Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing.''; PubMed Europe PMC Scholia
  197. Orci L, Stamnes M, Ravazzola M, Amherdt M, Perrelet A, Söllner TH, Rothman JE.; ''Bidirectional transport by distinct populations of COPI-coated vesicles.''; PubMed Europe PMC Scholia
  198. Goldberg J.; ''Decoding of sorting signals by coatomer through a GTPase switch in the COPI coat complex.''; PubMed Europe PMC Scholia
  199. Setty SR, Strochlic TI, Tong AH, Boone C, Burd CG.; ''Golgi targeting of ARF-like GTPase Arl3p requires its Nalpha-acetylation and the integral membrane protein Sys1p.''; PubMed Europe PMC Scholia
  200. Pulvirenti T, Giannotta M, Capestrano M, Capitani M, Pisanu A, Polishchuk RS, San Pietro E, Beznoussenko GV, Mironov AA, Turacchio G, Hsu VW, Sallese M, Luini A.; ''A traffic-activated Golgi-based signalling circuit coordinates the secretory pathway.''; PubMed Europe PMC Scholia
  201. Ganley IG, Espinosa E, Pfeffer SR.; ''A syntaxin 10-SNARE complex distinguishes two distinct transport routes from endosomes to the trans-Golgi in human cells.''; PubMed Europe PMC Scholia
  202. Luo W, Wang Y, Reiser G.; ''Proteinase-activated receptors, nucleotide P2Y receptors, and μ-opioid receptor-1B are under the control of the type I transmembrane proteins p23 and p24A in post-Golgi trafficking.''; PubMed Europe PMC Scholia
  203. McKnight NC, Jefferies HB, Alemu EA, Saunders RE, Howell M, Johansen T, Tooze SA.; ''Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC.''; PubMed Europe PMC Scholia
  204. Kawamoto K, Yoshida Y, Tamaki H, Torii S, Shinotsuka C, Yamashina S, Nakayama K.; ''GBF1, a guanine nucleotide exchange factor for ADP-ribosylation factors, is localized to the cis-Golgi and involved in membrane association of the COPI coat.''; PubMed Europe PMC Scholia
  205. Siniossoglou S, Pelham HR.; ''An effector of Ypt6p binds the SNARE Tlg1p and mediates selective fusion of vesicles with late Golgi membranes.''; PubMed Europe PMC Scholia
  206. Luke MR, Houghton F, Perugini MA, Gleeson PA.; ''The trans-Golgi network GRIP-domain proteins form alpha-helical homodimers.''; PubMed Europe PMC Scholia
  207. Hsia KC, Hoelz A.; ''Crystal structure of alpha-COP in complex with epsilon-COP provides insight into the architecture of the COPI vesicular coat.''; PubMed Europe PMC Scholia
  208. Behnia R, Panic B, Whyte JR, Munro S.; ''Targeting of the Arf-like GTPase Arl3p to the Golgi requires N-terminal acetylation and the membrane protein Sys1p.''; PubMed Europe PMC Scholia
  209. Mesmin B, Drin G, Levi S, Rawet M, Cassel D, Bigay J, Antonny B.; ''Two lipid-packing sensor motifs contribute to the sensitivity of ArfGAP1 to membrane curvature.''; PubMed Europe PMC Scholia
  210. Espinosa EJ, Calero M, Sridevi K, Pfeffer SR.; ''RhoBTB3: a Rho GTPase-family ATPase required for endosome to Golgi transport.''; PubMed Europe PMC Scholia
  211. Chia PZ, Gleeson PA.; ''Membrane tethering.''; PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
114725view16:20, 25 January 2021ReactomeTeamReactome version 75
113169view11:23, 2 November 2020ReactomeTeamReactome version 74
112397view15:33, 9 October 2020ReactomeTeamReactome version 73
101301view11:19, 1 November 2018ReactomeTeamreactome version 66
100838view20:50, 31 October 2018ReactomeTeamreactome version 65
100379view19:24, 31 October 2018ReactomeTeamreactome version 64
99926view16:08, 31 October 2018ReactomeTeamreactome version 63
99481view14:40, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
94056view13:54, 16 August 2017ReactomeTeamreactome version 61
93685view11:31, 9 August 2017ReactomeTeamreactome version 61
87865view12:07, 25 July 2016RyanmillerOntology Term : 'regulatory pathway' added !
86808view09:27, 11 July 2016ReactomeTeamNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
2-lysophosphatidylcholineMetaboliteCHEBI:17504 (ChEBI)
AA-CoAMetaboliteCHEBI:15514 (ChEBI)
ACTR10 ProteinQ9NZ32 (Uniprot-TrEMBL)
ACTR1A ProteinP61163 (Uniprot-TrEMBL)
ADP MetaboliteCHEBI:16761 (ChEBI)
ADPMetaboliteCHEBI:16761 (ChEBI)
AGPAT3ProteinQ9NRZ7 (Uniprot-TrEMBL)
ALPP ProteinP05187 (Uniprot-TrEMBL)
ARCN1 ProteinP48444 (Uniprot-TrEMBL)
ARF1 ProteinP84077 (Uniprot-TrEMBL)
ARF1:GDP:CYTH1,2,3,4ComplexR-HSA-8847870 (Reactome)
ARF1:GTP:CYTH1,2,3,4ComplexR-HSA-8847867 (Reactome)
ARF1:GTP:TRIP11:cargoComplexR-HSA-8847866 (Reactome)
ARF1:GTPComplexR-HSA-1806286 (Reactome)
ARF3 ProteinP61204 (Uniprot-TrEMBL)
ARF4 ProteinP18085 (Uniprot-TrEMBL)
ARF5 ProteinP84085 (Uniprot-TrEMBL)
ARF:GDPComplexR-HSA-6807786 (Reactome)
ARFGAP1 ProteinQ8N6T3 (Uniprot-TrEMBL)
ARFGAP1,2,3ComplexR-HSA-6807832 (Reactome)
ARFGAP2 ProteinQ8N6H7 (Uniprot-TrEMBL)
ARFGAP3 ProteinQ9NP61 (Uniprot-TrEMBL)
ARFIP2 ProteinP53365 (Uniprot-TrEMBL)
ARFIP2:MyrG-ARL1:GTPComplexR-HSA-6814066 (Reactome)
ARFIP2ProteinP53365 (Uniprot-TrEMBL)
ARFRP1 ProteinQ13795 (Uniprot-TrEMBL)
ARFRP1:GTPComplexR-HSA-6814067 (Reactome)
ATP MetaboliteCHEBI:15422 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
Ac-CoAMetaboliteCHEBI:15351 (ChEBI)
AcG-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:TGN Golgin dimersComplexR-HSA-6814069 (Reactome)
AcM-ARFRP1 ProteinQ13795 (Uniprot-TrEMBL)
AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTPComplexR-HSA-6814071 (Reactome)
AcM-ARFRP1:GTP:SYS1ComplexR-HSA-6814070 (Reactome)
AcM-ARFRP1:GTPComplexR-HSA-6814076 (Reactome)
BET1L ProteinQ9NYM9 (Uniprot-TrEMBL)
BET1LProteinQ9NYM9 (Uniprot-TrEMBL)
BICD dimerComplexR-HSA-8849243 (Reactome)
BICD1 ProteinQ96G01 (Uniprot-TrEMBL)
BICD2 ProteinQ8TD16 (Uniprot-TrEMBL)
BNIP1 ProteinQ12981 (Uniprot-TrEMBL)
BNIP1ProteinQ12981 (Uniprot-TrEMBL)
CAPZA1 ProteinP52907 (Uniprot-TrEMBL)
CAPZA2 ProteinP47755 (Uniprot-TrEMBL)
CAPZA3 ProteinQ96KX2 (Uniprot-TrEMBL)
CAPZB ProteinP47756 (Uniprot-TrEMBL)
CENPE ProteinQ02224 (Uniprot-TrEMBL)
COG

complex:CUX1 dimer:GOLGA5

dimer:STX5:PalmC-YKT6:BET1L:GOSR1:intra-Golgi retrograde cargo
ComplexR-HSA-8847548 (Reactome)
COG complex:Golgi snaresComplexR-HSA-6811360 (Reactome)
COG complex:RABsComplexR-HSA-8849739 (Reactome)
COG complexComplexR-HSA-6808819 (Reactome)
COG complexComplexR-HSA-6814058 (Reactome)
COG1 ProteinQ8WTW3 (Uniprot-TrEMBL)
COG2 ProteinQ14746 (Uniprot-TrEMBL)
COG3 ProteinQ96JB2 (Uniprot-TrEMBL)
COG4 ProteinQ9H9E3 (Uniprot-TrEMBL)
COG5 ProteinQ9UP83 (Uniprot-TrEMBL)
COG6 ProteinQ9Y2V7 (Uniprot-TrEMBL)
COG7 ProteinP83436 (Uniprot-TrEMBL)
COG8 ProteinQ96MW5 (Uniprot-TrEMBL)
COPA ProteinP53621 (Uniprot-TrEMBL)
COPB1 ProteinP53618 (Uniprot-TrEMBL)
COPB2 ProteinP35606 (Uniprot-TrEMBL)
COPE ProteinO14579 (Uniprot-TrEMBL)
COPG1 ProteinQ9Y678 (Uniprot-TrEMBL)
COPG2 ProteinQ9UBF2 (Uniprot-TrEMBL)
COPI-independent Golgi-to-ER cargoComplexR-HSA-8849329 (Reactome)
COPZ1 ProteinP61923 (Uniprot-TrEMBL)
COPZ2 ProteinQ9P299 (Uniprot-TrEMBL)
CUX1 ProteinQ13948 (Uniprot-TrEMBL)
CUX1 dimerComplexR-HSA-8847512 (Reactome)
CYTH1 ProteinQ15438 (Uniprot-TrEMBL)
CYTH1,2,3,4ComplexR-HSA-8847857 (Reactome)
CYTH2 ProteinQ99418 (Uniprot-TrEMBL)
CYTH3 ProteinO43739 (Uniprot-TrEMBL)
CYTH4 ProteinQ9UIA0 (Uniprot-TrEMBL)
Chromokinesin dimers R-HSA-984722 (Reactome)
CoA-SHMetaboliteCHEBI:15346 (ChEBI)
DCTN1 ProteinQ14203 (Uniprot-TrEMBL)
DCTN2 ProteinQ13561 (Uniprot-TrEMBL)
DCTN3 ProteinO75935 (Uniprot-TrEMBL)
DCTN4 ProteinQ9UJW0 (Uniprot-TrEMBL)
DCTN5 ProteinQ9BTE1 (Uniprot-TrEMBL)
DCTN6 ProteinO00399 (Uniprot-TrEMBL)
DYNC1H1 ProteinQ14204 (Uniprot-TrEMBL)
DYNC1I1 ProteinO14576 (Uniprot-TrEMBL)
DYNC1I2 ProteinQ13409 (Uniprot-TrEMBL)
DYNC1LI1 ProteinQ9Y6G9 (Uniprot-TrEMBL)
DYNC1LI2 ProteinO43237 (Uniprot-TrEMBL)
DYNLL1 ProteinP63167 (Uniprot-TrEMBL)
DYNLL2 ProteinQ96FJ2 (Uniprot-TrEMBL)
Dynein:Dynactin:microtubuleComplexR-HSA-2029135 (Reactome)
Dynein:Dynactin:microtubules:PAFAH1B1ComplexR-HSA-8849246 (Reactome)
GALNT1(1-559) ProteinQ10472 (Uniprot-TrEMBL)
GALNT2(1-571) ProteinQ10471 (Uniprot-TrEMBL)
GARP complexComplexR-HSA-6811301 (Reactome)
GBF1 ProteinQ92538 (Uniprot-TrEMBL)
GBF1ProteinQ92538 (Uniprot-TrEMBL)
GCC1 ProteinQ96CN9 (Uniprot-TrEMBL)
GCC2 ProteinQ8IWJ2 (Uniprot-TrEMBL)
GCC2 dimerComplexR-HSA-6814043 (Reactome)
GDP MetaboliteCHEBI:17552 (ChEBI)
GDPMetaboliteCHEBI:17552 (ChEBI)
GGC-RAB33B ProteinQ9H082 (Uniprot-TrEMBL)
GOLGA1 ProteinQ92805 (Uniprot-TrEMBL)
GOLGA4 ProteinQ13439 (Uniprot-TrEMBL)
GOLGA5 ProteinQ8TBA6 (Uniprot-TrEMBL)
GOLGA5 dimerComplexR-HSA-8847519 (Reactome)
GOLIM4 ProteinO00461 (Uniprot-TrEMBL)
GOSR1 ProteinO95249 (Uniprot-TrEMBL)
GOSR1ProteinO95249 (Uniprot-TrEMBL)
GOSR2 ProteinO14653 (Uniprot-TrEMBL)
GTP MetaboliteCHEBI:15996 (ChEBI)
GTPMetaboliteCHEBI:15996 (ChEBI)
Golgi-to-ER cargoComplexR-HSA-6814051 (Reactome)
Golgi-to-ER cargoComplexR-HSA-6814053 (Reactome)
H2OMetaboliteCHEBI:15377 (ChEBI)
IGF2R ProteinP11717 (Uniprot-TrEMBL)
KDELR1 ProteinP24390 (Uniprot-TrEMBL)
KDELR2 ProteinP33947 (Uniprot-TrEMBL)
KDELR3 ProteinO43731 (Uniprot-TrEMBL)
KIF11 ProteinP52732 (Uniprot-TrEMBL)
KIF12 ProteinQ96FN5 (Uniprot-TrEMBL)
KIF13B ProteinQ9NQT8 (Uniprot-TrEMBL)
KIF15 ProteinQ9NS87 (Uniprot-TrEMBL)
KIF16B ProteinQ96L93 (Uniprot-TrEMBL)
KIF18A ProteinQ8NI77 (Uniprot-TrEMBL)
KIF18B ProteinQ86Y91 (Uniprot-TrEMBL)
KIF19 ProteinQ2TAC6 (Uniprot-TrEMBL)
KIF1A ProteinQ12756 (Uniprot-TrEMBL)
KIF1B ProteinO60333 (Uniprot-TrEMBL)
KIF1C ProteinO43896 (Uniprot-TrEMBL)
KIF20A ProteinO95235 (Uniprot-TrEMBL)
KIF20B ProteinQ96Q89 (Uniprot-TrEMBL)
KIF21A ProteinQ7Z4S6 (Uniprot-TrEMBL)
KIF21B ProteinO75037 (Uniprot-TrEMBL)
KIF23 ProteinQ02241 (Uniprot-TrEMBL)
KIF25 ProteinQ9UIL4 (Uniprot-TrEMBL)
KIF26A ProteinQ9ULI4 (Uniprot-TrEMBL) KIF26A is atypical as it lacks ATPase activity.
KIF26B ProteinQ2KJY2 (Uniprot-TrEMBL)
KIF27 ProteinQ86VH2 (Uniprot-TrEMBL)
KIF28P ProteinB7ZC32 (Uniprot-TrEMBL)
KIF3A ProteinQ9Y496 (Uniprot-TrEMBL)
KIF3B ProteinO15066 (Uniprot-TrEMBL)
KIF3C ProteinO14782 (Uniprot-TrEMBL)
KIF5A ProteinQ12840 (Uniprot-TrEMBL)
KIF5B ProteinP33176 (Uniprot-TrEMBL)
KIF6 ProteinQ6ZMV9 (Uniprot-TrEMBL)
KIF9 ProteinQ9HAQ2 (Uniprot-TrEMBL)
KIFAP3 ProteinQ92845 (Uniprot-TrEMBL)
KIFC1 ProteinQ9BW19 (Uniprot-TrEMBL)
KIFC2 ProteinQ96AC6 (Uniprot-TrEMBL)
KLC1 ProteinQ07866 (Uniprot-TrEMBL)
KLC2 ProteinQ9H0B6 (Uniprot-TrEMBL)
KLC3 ProteinQ6P597 (Uniprot-TrEMBL)
KLC4 ProteinQ9NSK0 (Uniprot-TrEMBL)
Kinesin-13 dimers R-HSA-990485 (Reactome)
Kinesin-3 dimers R-HSA-984608 (Reactome)
Kinesins:microtubuleComplexR-HSA-983245 (Reactome)
M6PR ProteinP20645 (Uniprot-TrEMBL)
MAN1A1 ProteinP33908 (Uniprot-TrEMBL)
MAN1A2 ProteinO60476 (Uniprot-TrEMBL)
MAN1C1 ProteinQ9NR34 (Uniprot-TrEMBL)
MAN2A1 ProteinQ16706 (Uniprot-TrEMBL)
MAN2A2 ProteinP49641 (Uniprot-TrEMBL)
Microtubule protofilament R-HSA-8982424 (Reactome)
MyrG-ARL1 ProteinP40616 (Uniprot-TrEMBL)
MyrG-ARL1:GTPComplexR-HSA-6814064 (Reactome)
NAA30 ProteinQ147X3 (Uniprot-TrEMBL)
NAA30:NAA35:NAA38ComplexR-HSA-1183123 (Reactome)
NAA35 ProteinQ5VZE5 (Uniprot-TrEMBL)
NAA38 ProteinQ9BRA0 (Uniprot-TrEMBL)
NAPA ProteinP54920 (Uniprot-TrEMBL)
NAPB ProteinQ9H115 (Uniprot-TrEMBL)
NAPG ProteinQ99747 (Uniprot-TrEMBL)
NBAS ProteinA2RRP1 (Uniprot-TrEMBL)
NBAS:RINT1:ZW10ComplexR-HSA-6811358 (Reactome)
NSF ProteinP46459 (Uniprot-TrEMBL)
NSF hexamerComplexR-HSA-2193131 (Reactome)
PAFAH1B1 ProteinP43034 (Uniprot-TrEMBL)
PAFAH1B1ProteinP43034 (Uniprot-TrEMBL)
PAFAH1B2 ProteinP68402 (Uniprot-TrEMBL)
PAFAH1B3 ProteinQ15102 (Uniprot-TrEMBL)
PCMetaboliteCHEBI:16110 (ChEBI)
PLA2G4A ProteinP47712 (Uniprot-TrEMBL)
PLA2G6 ProteinO60733 (Uniprot-TrEMBL)
PLIN3 ProteinO60664 (Uniprot-TrEMBL)
PLIN3ProteinO60664 (Uniprot-TrEMBL)
PalmC-YKT6 ProteinO15498 (Uniprot-TrEMBL)
PalmC-YKT6ProteinO15498 (Uniprot-TrEMBL)
PiMetaboliteCHEBI:18367 (ChEBI)
RAB18 ProteinQ9NP72 (Uniprot-TrEMBL)
RAB18:GDPComplexR-HSA-8850024 (Reactome)
RAB1:GDPComplexR-HSA-5694296 (Reactome)
RAB1:GTP:GBF1:ARF:GDPComplexR-HSA-6811369 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomer:p24 dimers:ARFGAPs:SEC22B:cargoComplexR-HSA-6811375 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomerComplexR-HSA-6811372 (Reactome)
RAB1:GTP:GBF1:ARF:GTPComplexR-HSA-6811371 (Reactome)
RAB1:GTP:GBF1ComplexR-HSA-6811366 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargo:NBAS:RINT1:ZW10:STX18:USE1L:BNIP1ComplexR-HSA-6811379 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargoComplexR-HSA-6811377 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:kinesins:microtubulesComplexR-HSA-6811381 (Reactome)
RAB1:GTPComplexR-HSA-6808823 (Reactome)
RAB1A ProteinP62820 (Uniprot-TrEMBL)
RAB1B ProteinQ9H0U4 (Uniprot-TrEMBL)
RAB30 ProteinQ15771 (Uniprot-TrEMBL)
RAB33B:GTP:RIC1:RGP1ComplexR-HSA-8847863 (Reactome)
RAB33B:GTPComplexR-HSA-8847628 (Reactome)
RAB36 ProteinO95755 (Uniprot-TrEMBL)
RAB39A ProteinQ14964 (Uniprot-TrEMBL)
RAB3GAP1 ProteinQ15042 (Uniprot-TrEMBL)
RAB3GAP1:RAB3GAP2:RAB18:GDPComplexR-HSA-8850030 (Reactome)
RAB3GAP1:RAB3GAP2:RAB18:GTPComplexR-HSA-8850032 (Reactome)
RAB3GAP1:RAB3GAP2ComplexR-HSA-8850028 (Reactome)
RAB3GAP2 ProteinQ9H2M9 (Uniprot-TrEMBL)
RAB41 ProteinQ5JT25 (Uniprot-TrEMBL)
RAB43 ProteinQ86YS6 (Uniprot-TrEMBL)
RAB43:GDP:USP6NLComplexR-HSA-8847533 (Reactome)
RAB43:GTP:USP6NLComplexR-HSA-8847526 (Reactome)
RAB43:GTPComplexR-HSA-8847528 (Reactome)
RAB6:GDP:RIC1:RGP1ComplexR-HSA-6811355 (Reactome)
RAB6:GDPComplexR-HSA-6811310 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargo:Dynein:Dynactin:microtubulesComplexR-HSA-8849336 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargoComplexR-HSA-8849334 (Reactome)
RAB6:GTP:COPI-independent retrograde Golgi-to-ER cargoComplexR-HSA-8849338 (Reactome)
RAB6:GTP:RIC1:RGP1:GARP complex:COG complex:AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:Golgin dimers:STX6:STX16:VTI1A:VAMP4:early endosome-to-TGN cargoComplexR-HSA-6811357 (Reactome)
RAB6:GTP:RIC1:RGP1ComplexR-HSA-6811353 (Reactome)
RAB6:GTPComplexR-HSA-8849251 (Reactome)
RAB6A ProteinP20340 (Uniprot-TrEMBL)
RAB6B ProteinQ9NRW1 (Uniprot-TrEMBL)
RAB9:GDPComplexR-HSA-6814641 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3:RHOBTB3:ATPComplexR-HSA-6814669 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3ComplexR-HSA-6814666 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:STX16:STX10:VTI1A:GARP complex:GCC2 dimer:late-endosome-to-TGN cargoComplexR-HSA-6814664 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:late endosome-to-TGN cargoComplexR-HSA-6814662 (Reactome)
RAB9A ProteinP51151 (Uniprot-TrEMBL)
RAB9B ProteinQ9NP90 (Uniprot-TrEMBL)
RABEPKProteinQ7Z6M1 (Uniprot-TrEMBL)
RACGAP1 ProteinQ9H0H5 (Uniprot-TrEMBL)
RGP1 ProteinQ92546 (Uniprot-TrEMBL)
RHOBTB3 ProteinO94955 (Uniprot-TrEMBL)
RHOBTB3:ADPComplexR-HSA-6814647 (Reactome)
RHOBTB3:ATPComplexR-HSA-6814649 (Reactome)
RIC1 ProteinQ4ADV7 (Uniprot-TrEMBL)
RIC1:RGP1ComplexR-HSA-6811347 (Reactome)
RIC1:RGP1ComplexR-HSA-8847862 (Reactome)
RINT1 ProteinQ6NUQ1 (Uniprot-TrEMBL)
SCOC ProteinQ9UIL1 (Uniprot-TrEMBL)
SCOC:MyrG-ARL1:GTPComplexR-HSA-6814081 (Reactome)
SCOCProteinQ9UIL1 (Uniprot-TrEMBL)
SEC22B ProteinO75396 (Uniprot-TrEMBL)
SEC22B:STX18:USE1:BNIP1L:3xSNAPs:NSF hexamerComplexR-HSA-6811344 (Reactome)
SEC22B:STX18:USE1L:BNIP1ComplexR-HSA-6811343 (Reactome)
SEC22BProteinO75396 (Uniprot-TrEMBL)
SNAP29 ProteinO95721 (Uniprot-TrEMBL)
SNAPsComplexR-HSA-5694313 (Reactome)
STX10 ProteinO60499 (Uniprot-TrEMBL)
STX10:STX16:VTI1A:VAMP3:NSF hexamer:SNAPsComplexR-HSA-6814654 (Reactome)
STX10:STX16:VTI1A:VAMP3ComplexR-HSA-6814652 (Reactome)
STX10:STX16:VTI1AComplexR-HSA-6814651 (Reactome)
STX10ProteinO60499 (Uniprot-TrEMBL)
STX16 ProteinO14662 (Uniprot-TrEMBL)
STX16ProteinO14662 (Uniprot-TrEMBL)
STX18 ProteinQ9P2W9 (Uniprot-TrEMBL)
STX18:USE1L:BNIP1ComplexR-HSA-6811340 (Reactome)
STX18ProteinQ9P2W9 (Uniprot-TrEMBL)
STX5 ProteinQ13190 (Uniprot-TrEMBL)
STX5:PalmC-YKT6:BET1L:GOSR1:NSF hexamer:3xSNAPsComplexR-HSA-8847640 (Reactome)
STX5:PalmC-YKT6:BET1LComplexR-HSA-8847633 (Reactome)
STX5ProteinQ13190 (Uniprot-TrEMBL)
STX6 ProteinO43752 (Uniprot-TrEMBL)
STX6:STX16:VTI1A:VAMP4:NSF hexamer:3xSNAPsComplexR-HSA-6814660 (Reactome)
STX6:STX16:VTI1A:VAMP4ComplexR-HSA-6814656 (Reactome)
STX6:STX16:VTI1AComplexR-HSA-6811339 (Reactome)
STX6ProteinO43752 (Uniprot-TrEMBL)
STX:PalmC-YKT6:BET1L:GOSR1ComplexR-HSA-8847639 (Reactome)
SURF4 ProteinO15260 (Uniprot-TrEMBL)
SYS1 ProteinQ8N2H4 (Uniprot-TrEMBL)
SYS1ProteinQ8N2H4 (Uniprot-TrEMBL)
TGN Golgin dimersComplexR-HSA-6814047 (Reactome)
TGOLN2 ProteinO43493 (Uniprot-TrEMBL)
TMED10 ProteinP49755 (Uniprot-TrEMBL)
TMED2 ProteinQ15363 (Uniprot-TrEMBL)
TMED3 ProteinQ9Y3Q3 (Uniprot-TrEMBL)
TMED7 ProteinQ9Y3B3 (Uniprot-TrEMBL)
TMED9 ProteinQ9BVK6 (Uniprot-TrEMBL)
TMF1 ProteinP82094 (Uniprot-TrEMBL)
TRIP11 ProteinQ15643 (Uniprot-TrEMBL)
TRIP11:cargoComplexR-HSA-8847860 (Reactome)
USE1 ProteinQ9NZ43 (Uniprot-TrEMBL)
USE1ProteinQ9NZ43 (Uniprot-TrEMBL)
USP6NL ProteinQ92738 (Uniprot-TrEMBL)
USP6NLProteinQ92738 (Uniprot-TrEMBL)
VAMP3 ProteinQ15836 (Uniprot-TrEMBL)
VAMP3ProteinQ15836 (Uniprot-TrEMBL)
VAMP4 ProteinO75379 (Uniprot-TrEMBL)
VAMP4:early

endosome-to-TGN

cargo
ComplexR-HSA-6811333 (Reactome)
VAMP4ProteinO75379 (Uniprot-TrEMBL)
VPS45 ProteinQ9NRW7 (Uniprot-TrEMBL)
VPS51 ProteinQ9UID3 (Uniprot-TrEMBL)
VPS52 ProteinQ8N1B4 (Uniprot-TrEMBL)
VPS53 ProteinQ5VIR6 (Uniprot-TrEMBL)
VPS54 ProteinQ9P1Q0 (Uniprot-TrEMBL)
VTI1A ProteinQ96AJ9 (Uniprot-TrEMBL)
VTI1AProteinQ96AJ9 (Uniprot-TrEMBL)
ZW10 ProteinO43264 (Uniprot-TrEMBL)
cPLA2sComplexR-HSA-8848479 (Reactome)
coatomerComplexR-HSA-6807805 (Reactome)
early

endosome-to-TGN

cargo
ComplexR-HSA-6811330 (Reactome)
fatty acidMetaboliteCHEBI:35366 (ChEBI)
intra-Golgi

cargo:GOLGA5

dimer:GOSR1
ComplexR-HSA-8847543 (Reactome)
intra-Golgi cargoComplexR-HSA-8847546 (Reactome)
late-endosome-to-TGN cargoComplexR-HSA-6814632 (Reactome)
other

COG-interacting

RABs
ComplexR-HSA-8849736 (Reactome)
other COG interacting snaresComplexR-HSA-6811306 (Reactome)
p24 dimersComplexR-HSA-6808871 (Reactome)
p24 dimersComplexR-HSA-6811326 (Reactome)
pS-RABEPK ProteinQ7Z6M1 (Uniprot-TrEMBL)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
2-lysophosphatidylcholineArrowR-HSA-8848484 (Reactome)
2-lysophosphatidylcholineArrowR-HSA-8849353 (Reactome)
2-lysophosphatidylcholineR-HSA-8849345 (Reactome)
AA-CoAR-HSA-8849345 (Reactome)
ADPArrowR-HSA-6814678 (Reactome)
ADPArrowR-HSA-6814683 (Reactome)
ADPArrowR-HSA-8847638 (Reactome)
ADPArrowR-HSA-8849353 (Reactome)
AGPAT3mim-catalysisR-HSA-8849345 (Reactome)
ARF1:GDP:CYTH1,2,3,4ArrowR-HSA-8847883 (Reactome)
ARF1:GTP:CYTH1,2,3,4ArrowR-HSA-8847880 (Reactome)
ARF1:GTP:CYTH1,2,3,4R-HSA-8847883 (Reactome)
ARF1:GTP:CYTH1,2,3,4mim-catalysisR-HSA-8847883 (Reactome)
ARF1:GTP:TRIP11:cargoArrowR-HSA-8847875 (Reactome)
ARF1:GTPR-HSA-8847875 (Reactome)
ARF1:GTPR-HSA-8847880 (Reactome)
ARF:GDPArrowR-HSA-6811418 (Reactome)
ARF:GDPR-HSA-6811411 (Reactome)
ARFGAP1,2,3ArrowR-HSA-6811418 (Reactome)
ARFGAP1,2,3R-HSA-6811417 (Reactome)
ARFIP2:MyrG-ARL1:GTPArrowR-HSA-6814094 (Reactome)
ARFIP2R-HSA-6814094 (Reactome)
ARFRP1:GTPR-HSA-6814090 (Reactome)
ATPR-HSA-6811422 (Reactome)
ATPR-HSA-6814678 (Reactome)
ATPR-HSA-6814683 (Reactome)
ATPR-HSA-8847638 (Reactome)
ATPR-HSA-8849353 (Reactome)
Ac-CoAR-HSA-6814090 (Reactome)
AcG-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:TGN Golgin dimersArrowR-HSA-6814091 (Reactome)
AcG-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:TGN Golgin dimersArrowR-HSA-6814682 (Reactome)
AcG-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:TGN Golgin dimersR-HSA-6811431 (Reactome)
AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTPArrowR-HSA-6814086 (Reactome)
AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTPR-HSA-6814091 (Reactome)
AcM-ARFRP1:GTP:SYS1ArrowR-HSA-6814088 (Reactome)
AcM-ARFRP1:GTP:SYS1R-HSA-6814086 (Reactome)
AcM-ARFRP1:GTPArrowR-HSA-6814090 (Reactome)
AcM-ARFRP1:GTPR-HSA-6814088 (Reactome)
ArrowR-HSA-8849353 (Reactome)
BET1LArrowR-HSA-8847638 (Reactome)
BICD dimerArrowR-HSA-8849353 (Reactome)
BICD dimerR-HSA-8849348 (Reactome)
BNIP1ArrowR-HSA-6811422 (Reactome)
COG

complex:CUX1 dimer:GOLGA5

dimer:STX5:PalmC-YKT6:BET1L:GOSR1:intra-Golgi retrograde cargo
ArrowR-HSA-8847544 (Reactome)
COG

complex:CUX1 dimer:GOLGA5

dimer:STX5:PalmC-YKT6:BET1L:GOSR1:intra-Golgi retrograde cargo
R-HSA-8847635 (Reactome)
COG complex:Golgi snaresArrowR-HSA-6811433 (Reactome)
COG complex:RABsArrowR-HSA-8849748 (Reactome)
COG complexArrowR-HSA-6814682 (Reactome)
COG complexArrowR-HSA-8847635 (Reactome)
COG complexR-HSA-6811431 (Reactome)
COG complexR-HSA-6811433 (Reactome)
COG complexR-HSA-8847544 (Reactome)
COG complexR-HSA-8849748 (Reactome)
COPI-independent Golgi-to-ER cargoR-HSA-8849348 (Reactome)
CUX1 dimerArrowR-HSA-8847635 (Reactome)
CUX1 dimerR-HSA-8847544 (Reactome)
CYTH1,2,3,4R-HSA-8847880 (Reactome)
CoA-SHArrowR-HSA-6814090 (Reactome)
CoA-SHArrowR-HSA-8849345 (Reactome)
Dynein:Dynactin:microtubuleArrowR-HSA-8849353 (Reactome)
Dynein:Dynactin:microtubules:PAFAH1B1R-HSA-8849350 (Reactome)
GARP complexArrowR-HSA-6814671 (Reactome)
GARP complexArrowR-HSA-6814682 (Reactome)
GARP complexR-HSA-6811431 (Reactome)
GARP complexR-HSA-6814674 (Reactome)
GBF1ArrowR-HSA-6811418 (Reactome)
GBF1R-HSA-6811415 (Reactome)
GCC2 dimerArrowR-HSA-6814671 (Reactome)
GCC2 dimerR-HSA-6814674 (Reactome)
GDPArrowR-HSA-6811414 (Reactome)
GDPArrowR-HSA-6811429 (Reactome)
GDPArrowR-HSA-8850041 (Reactome)
GOLGA5 dimerArrowR-HSA-8847635 (Reactome)
GOSR1ArrowR-HSA-8847638 (Reactome)
GTPR-HSA-6811414 (Reactome)
GTPR-HSA-6811429 (Reactome)
GTPR-HSA-8850041 (Reactome)
Golgi-to-ER cargoArrowR-HSA-6811427 (Reactome)
Golgi-to-ER cargoR-HSA-6811417 (Reactome)
H2OR-HSA-8848484 (Reactome)
Kinesins:microtubuleArrowR-HSA-6811423 (Reactome)
Kinesins:microtubuleR-HSA-6811426 (Reactome)
MyrG-ARL1:GTPR-HSA-6814086 (Reactome)
MyrG-ARL1:GTPR-HSA-6814094 (Reactome)
MyrG-ARL1:GTPR-HSA-6814096 (Reactome)
NAA30:NAA35:NAA38mim-catalysisR-HSA-6814090 (Reactome)
NBAS:RINT1:ZW10R-HSA-6811423 (Reactome)
NSF hexamerArrowR-HSA-6811422 (Reactome)
NSF hexamerArrowR-HSA-6814678 (Reactome)
NSF hexamerArrowR-HSA-6814683 (Reactome)
NSF hexamerArrowR-HSA-8847638 (Reactome)
NSF hexamerR-HSA-6811425 (Reactome)
NSF hexamerR-HSA-6814676 (Reactome)
NSF hexamerR-HSA-6814684 (Reactome)
NSF hexamerR-HSA-8847637 (Reactome)
PAFAH1B1ArrowR-HSA-8849350 (Reactome)
PCArrowR-HSA-8849345 (Reactome)
PCR-HSA-8848484 (Reactome)
PLIN3ArrowR-HSA-6814670 (Reactome)
PalmC-YKT6ArrowR-HSA-8847638 (Reactome)
PiArrowR-HSA-6811422 (Reactome)
R-HSA-6811411 (Reactome) GBF1 recruits inactive ARF:GDP complexes to the Golgi (Monetta et al, 2007). There are 5 known ARFs in the human cell. Class I members ARF1 and ARF 3 are expressed at high levels and broadly distributed through the secretory system, while Class II members ARF4 and 5 are expressed at lower levels. ARF6, the single Class III ARF, appears to function more specifically in endocytosis and actin dynamics (Chun et al, 2008; reviewed in D'Souza-Schorey and Chavrier, 2006; Szul and Sztul, 2011). GBF1 has been shown to activate ARF1, 4, and 5, but not ARF3, while single and pairwise knockdown of ARF1, 3, 4 and 5 suggests that no single ARF is responsible for any given step in the secretory pathway (Manolea et al, 2010; Volpicelli-Daley et al, 2005).
R-HSA-6811412 (Reactome) Activation of ARF is tightly correlated to recruitment of the COPI coat (Donaldson et al, 1991; Serafini et al, 1991; Donaldson et el, 1992; Palmer et al, 1993; reveiwed in Szul and Sztul, 2011). Studies in yeast and in mammalian cells support a direct interaction between the GTPase and components of the COPI coat (Zhao et al, 1997; Zhao et al, 1999; Zhao et al, 2006; Eugster et al, 2000; Sun et al, 2007; Yu et al, 2012; Harter and Wieland, 1998; Bethune et al, 2006; reviewed in Popoff et al, 2011). The COPI coat consists of 7 subunits arranged in 2 subcomplexes. The inner coat is made up of a tetrameric complex consisting of the beta, gamma, zeta and delta COPI subunits, while the outer coat is a trimer consisting of the alpha, beta prime and epsilon subunits (Eugster et al, 2000; Waters et al, 1991). Both of the zeta and gamma subunits have 2 isoforms with different subcellular locations, suggesting that different COPI coats may mediate different steps of the secretory pathway (Moelleken et al, 2007). Unlike the case for COPII or clathrin coats, all components of the COPI coat are recruited simultaneously as a preformed heptameric complex (Hara-Kuge et al, 1994).
R-HSA-6811414 (Reactome) GBF1 facilitates the exchange of GDP for GTP, activating ARF (Niu et al, 2005; Szul et al, 2005; Szul et al, 2007; Kawamoto et al, 2002; reviewed in Szul and Sztul, 2011).
R-HSA-6811415 (Reactome) In its GTP-bound active state, RAB1 recruits the ARF GEF GBF1 to the Golgi (Monetta et al, 2007). GBF is the only ARF activator required for the formation of COPI coats, and therefore it has roles in the anterograde ERGIC-to-cis-Golgi as well as in COPI-mediated retrograd transport within the Golgi and back to the ERGIC and ER (Kawamoto et al, 2002; Szul et al, 2005; Zhao et al, 2006; Szul et al, 2007; reviewed in Szul and Sztul, 2011). GBR1 activates ARF1, 2, 3 and 5 which play overlapping roles in the secretory pathway (Volpicelli-Daley et al, 2005; Chun et al, 2008; reviewed in D'Souza-Schorey and Chavrier, 2006).
R-HSA-6811417 (Reactome) Binding and polymerization of coatomer is coordinated with the incorporation of cargo proteins and Golgi-targeting snares, as well as with recruitment of ARFGAP proteins (Letourneur et al, 1994; Nagahama et al,1996; Bremser et al, 1999).
Typical cargo for COPI-mediated retrograde traffic includes the KDEL receptors, which bind and recycle ER-resident proteins, as well as other cycling proteins such as SURF4 that interacts with p24 proteins and contributes to Golgi maintenance (Cosson and Letourner, 1994; Ben-Tekaya et al, 2005; Majoul et al, 2001; Orci et al, 1997, Bremser et al, 1999; Presley et al, 1997; Mitrovic et al, 2008; reviewed in Beck et al, 2009).
Other protein components of the COPI vesicle include the p24 family of proteins, which serve diverse roles in the early secretory pathway (reviewed in Schuiki and Volchuk, 2012). Oligomeric p24 proteins interact with ADP-bound ARF and components of the COPI coat, contributing to coatomer recruitment and oligomerization (Gommel et al, 2001; Majoul et al, 2001; Bethune et al, 2006; Harter and Wieland, 1998; Langer et al, 2008; Reinhard et al, 1999). p24 proteins also act as cargo receptors for various proteins destined for packaging in COPI vesicles; these include GPI-anchored transmembrane proteins, WNT ligands and some G-protein coupled receptors, among others (Takida et al, 2008; Bonnon et al, 2010; Luo et al, 2011; Beuchling et al, 2011; Wang and Kazanietz, 2002; reviewed in Schuiki and Volchuk, 2012). p24 proteins also contribute to COPI coat disassembly by restricting ARF GTPase activity until cargo has been loaded (Goldberg, 2000; Lanoix et al, 2001).
ARFGAPs are recruited to the budding vesicle through direct interaction with active ARF, the cytoplasmic tails of cargo proteins and with components of the COPI coat (Goldberg, 2000; Majoul et al, 2001; Aoe et al, 1997; Kliouchnikov et al, 2009; Luo et al, 2009). Stimulation of ARF GTPase activity is coordinated with cargo recruitment to ensure that only cargo-loaded vesicles are produced (Goldberg, 2000; Luo et al, 2009).
Mammalian cells have 3 ARFGAPs that appear to be involved in COPI-mediated traffic, ARFGAP1,2 and 3 (Frigerio et al, 2007; Liu et al, 2001; Kahn et al, 2008). ARFGAP1 has a ALPS domain that recognizes membrane curvature and that is required for the GTPase stimulating activity of the protein, suggesting a mechanism for coordinating ARF1-mediated GTP hydrolysis with vesicle formation (Bigay et al, 2003; Mesmin et al, 2007). ARFGAP 2 and 3 do not contain this motif, and their activity is dependent upon interaction with coatomer (Weimar et al 2008; Kliouchnikov et al, 2009; Luo et al, 2009).
R-HSA-6811418 (Reactome) The ARFGAP proteins stimulates ARF GTPase activity, promoting the release of the nascent COPI vesicle from the membrane and release of ARF:ADP (Tanigawa et al, 1993; reviewed in Beck et al, 2009; East and Kahn, 2011). Although this reaction shows their dissociation, it is not clear whether ARFGAPs persist on the COPI vesicle after GTP hydrolysis, nor is it known when GBF is released from the nascent COPI vesicle.

R-HSA-6811422 (Reactome) NSF-dependent hydrolysis of ATP is required to disassociate the cis-SNARE complex, releasing the SNAREs for further rounds of membrane fusion (Mayer et al, 1996; Muller et al, 1999; Muller et al, 2002; Otto et al, 1997; Whiteheart et al, 2004; Yu et al, 1999; Zhao et al, 2012; Shah et al, 2015; reviewed in Sudhof and Rothman, 2009).
R-HSA-6811423 (Reactome) Retrograde COPI vesicles destined for fusion with the ER are tethered to the ER membrane by interactions with the ER t-SNARE proteins and with the CATCHR ('complexes associated with tethering containing helical rods') complex NRZ (reviewed in Szul and Sztul, 2011; Tagaya et al, 2014). The trimeric NRZ complex, known as Dsl in yeast, is composed of NBAS, RINT1 and ZW10 and is recruited to the ER through association with the ER t-SNAREs USE1L, STX18 and BNIP1 (Hirose et al, 2004; Aoki et al, 2004; Nakajima et al, 2004; Arasaki et al, 2006; Ren et al, 2009; Civril et al, 2010; reviewed in Tagaya et al, 2014). Evidence in yeast suggests components of the Dsl complex also interact with the coatomer coat; these interactions contribute to vesicle fusion both by aiding in the recruitment of the vesicle to the ER membrane and also to the depolymerization of coatomer and thus vesicle uncoating Interactions (Andag et al, 2001; Andag et al, 2003; Reilly et al, 2001; Hsia and Hoelz, 2010; Meiringer et al, 2011; Zink et al, 2009). Note that although this pathway shows COPI vesicles from the Golgi being 'received' exclusively at the ER, vesicles are also tethered and fused at the ERGIC. The SNAREs and tethering complexes that mediate this fusion are not identified.
R-HSA-6811425 (Reactome) After membrane fusion, the 4-membered cis-SNARE complex is dissociated in an ATP-dependent manner by SNAP and NSF (Mayer et al, 1996; Sollner et al, 1993; reviewed in Jahn and Scheller, 2006; Sudhof and Rothman, 2009).
R-HSA-6811426 (Reactome) COPI-mediated retrograde traffic is dependent on microtubules and the plus-end motor kinsesin. Although it is not shown in this reaction, vesicle translocation along the microtubules by kinesin depends on ATP hydrolysis (Lippincott-Scwartz et al, 1995; Stauber et al, 2006; Tomas et al, 2010)
R-HSA-6811427 (Reactome) While the details of COPI vesicle uncoating are not fully established, interactions between components of the NRZ tethering complex and coatomer may contribute to coat depolymerization and release (Zink et al, 2009; Ren et al, 2009; Tripathi et al, 2009; reviewed in Barlowe and Fink, 2013).
R-HSA-6811428 (Reactome) RAB proteins are required for the RINT-1/ZW10 and COG-dependent organization of the Golgi ribbon stack, and for the trafficking of proteins through the Golgi. Indeed, cargo traffic through the Golgi depends on the maintenance of the Golgi stacks (Hirose et al, 2004; Arasaki et al, 2006; Sun et al, 2007; reviewed in Liu and Storrie, 2015). RAB6 is the primary RAB protein involved in intra-Golgi trafficking; it also has roles in COPI-independent retrograde traffic from the Golgi to the ER. RAB6A is a widely expressed isoform, while RAB6B is restricted to neuronal tissue (Darchen and Goud, 2000). RAB6 is localized to the trans-Golgi network (TGN), and a GTP-locked constitutively active form induces concentration of Golgi enzymes into the ER (Ferrano et al, 2104; Jiang and Storrie, 2005; Martinex et al, 1997; Micaroni et al, 2013; Storrie et al, 2012; Sun et al, 2007; Young et al, 2005). Inactive RAB6:GDP is recruited to the TGN through interaction with the RIC1:RGP1 complex, which also acts as a guanine nucleotide exchange factor (GEF) for RAB6 (Pusapati et al, 2012; Siniossoglou et al, 2000; Siniossoglou et al, 2001).
R-HSA-6811429 (Reactome) The RIC1:RGP1 complex stimulates nucleotide exchange on trans-Golgi network (TGN)-localized RAB6, activating it (Pusapati et al, 2012; Siniossoglou et al 2001; Siniossoglou et al, 2000). Acitvated RAB6 nucleates a tethering complex at the TGN that is required for fusion of endosome-derived vesicles arriving at the late Golgi (Siniossoglou et al, 2001; Liewen et al, 2005; Perez-Victoria et al, 2008; Perez-Victoria et al, 2009; reviewed in Bonaficino and Hierro, 2011).
R-HSA-6811431 (Reactome) Active RAB6 contributes to the recruitment of the Golgi-associated retrograde protein (GARP) tethering complex to the TGN, where it aids in the capture of retrograde vesicles from the early endosome (Liewen et al, 2005; reviewed in Bonifacino and Hierro, 2011). Typical cargo of these vesicles includes resident TGN proteins such as TGOLN2 (also known as TGN46) and internalized Shiga toxin subunit B (STx-B) and cholera toxin (Perez-Victoria et al, 2008; Ganley et al 2008; Pusapati et al, 2012; reviewed in Pfeffer, 2011; Liu and Storrie, 2012). Two studies have identifed RAB43 and its associated GAP USP6NL as being required for the retrograde traffic of Shiga toxin, however the details of this remain to be worked out (Haas et al, 2007; Fuchs et al, 2007).
The human GARP complex consists of VPS54, VPS53, VPS52 and VPS51 and has been shown to interact with GTP-bound RAB6, with the TGN SNAREs STX10 and STX16 and with a vesicle fraction containing the v-SNARE VAMP4 (Connibear et al, 2000; Liewen et al, 2005; Perez-Victoria et al, 2009; Perez-Victoria et al, 2010; Siniossoglou and Pelham, 2002; reviewed in Bonafacino and Hierro, 2011).

Like the GARP complex, the conserved oligomeric Golgi (COG) complex has also been implicated in retrograde traffic of TGOLN2 and STx-B in a STX6:STX16:VTI1A and VAMP4-dependent manner, and COG has been shown to interact directly with RAB6 (Mallard et al, 2002; Fukuda et al, 2008; Laufman et al, 2011; reviewed in Pfeffer, 2011). Despite the representation in this reaction, however, there is not yet evidence that the GARP and the COG complexes act together to facilitate the capture of a single early endosome-derived vesicle.
In addition to the multisubunit tethering complexes COG and GARP, the long coiled-coil TGN-associated Golgins also contribute to tethering of vesicles derived from the early endosome (Luke et al, 2005; Derby et al, 2007; Reddy et al, 2006; Lu et al, 2004; Yoshino et al, 2005; Hayes et al, 2009; reviewed in Munro, 2011).
R-HSA-6811433 (Reactome) Octameric COG (Conserved Oligomeric Golgi) is a Golgi localized tethering complex that aids in the capture of vesicles during intra-Golgi traffic as well as the capture of retrograde vesicles from the endosome at the trans-Golgi network (Zolov and Lupashin, 2005; reviewed in Willet et al, 2013a). Consistent with this, the COG complex interacts with many of the proteins involved in vesicle targeting, including SNAREs, coat proteins and RABs, among others. At the Golgi, COG has been shown to interact with Golgi SNAREs STX6, STX6, STX16, GOSR1, GOSR2, BET1L, SNAP29, VPS45 and VTI1A, but not other Golgi SNAREs and not ERGIC-resident SNAREs (Suvorora et al, 2002; Laufman et al, 2009; Laufman et al, 2011; Laufman et al, 2013; Shestakova et al, 2007; Willet et al, 2013b). The function of each of these COG-Golgi SNARE interactions has not yet been characterized in full detail (reviewed in Willet et al, 2013a).
R-HSA-6814086 (Reactome) ARFRP1 regulates Golgi localization of ARL1, another ARF-like GTPase that itself recruits a number of Golgin-tethering factors to the TGN. Knockout strains of ARL3, the yeast homologue of ARFRP1, abrogates Golgi localization of both yeast Arl1p and the four yeast Golgin homologues, suggesting a cascade of ARL proteins is contributes to retrograde trafficking at the TGN (Setty et al, 2003; Setty et al, 2004; Behnia et al, 2004; Panic et al, 2003; reviewed in Munro, 2005; Bonafacino and Rojas, 2006). GEF and GAP proteins that regulate ARFRP1 and ARL1 activity have not yet been identified (reviewed in Munro, 2005).
R-HSA-6814088 (Reactome) Acetylation of the N-terminal methionine of ARFRP1 contributes to its interaction with the Golgi-localized membrane protein SYS1. ARFRP1 is part of an ARF cascade at the late or trans-Golgi, where it plays a role in retrograde traffic by recruiting ARL1, which in turn interacts with a number of Golgin tethering factors required for vesicle docking at the TGN (Behnia et al, 2004; Setty et al, 2004; Shin et al, 2005; reviewed in Bonifacino and Rojas, 2006; Munro, 2011).
R-HSA-6814090 (Reactome) ARFRP1 is an ARF family member GTPase that recruits ARL1 to the trans-Golgi network to play roles in retrograde trafficking of proteins from the endolysosomal system. ARFRP1 is an atypical ARF family member in that it is not myristolated, but is instead acetylated at the amino-terminal methionine by the NatC complex. Acetylation is required for the interaction of ARFRP1 with SYS1, which contributes to its targeting to its TGN (Behnia et al, 2004; Setty et al, 2004).
R-HSA-6814091 (Reactome) GTP-bound ARL1, in conjunction with RAB6 and/or RAB9, is responsible for the recruitment of the 4 trans-Golgi network associated Golgin tethering factors, GOLGA4 (also known as Golgin245), GOLGA1 (also known as Golgin97), GCC1 (also known as GCC88) and GCC2 (also known as GCC185) (Barr et al, 1999; van Valkenburgh et al, 2001; Panic et al, 2003a; Panic et al, 2003b; Wu et al, 2004; Setty et al, 2003; reviewed in Munro et al, 2011). These coiled-coil tethering factors act as homodimers and participate in the recruitment of early endolysosomal-derived vesicles to the TGN by virtue of interacting with SNAREs and RAB proteins (Luke et al 2005; Lieu et al, 2007; Burguette et al, 2008; Ganley et al, 2008; Hayes et al, 2009; reviewed in Munro et al, 2011; Pfeffer, 2011). Evidence suggests that the Golgin tethering proteins show specificity for different retrograde cargos. For instance, retrograde transport of Shiga toxin requires both GOLGA1 and GOLGA4, while GOLGA1 is dispensible for transport of mannose-6-phosphate receptors (Lu et al, 2004; Yoshino et al, 2005; Reddy et al, 2006). Similarly, GCC1, but not GCC2, is required for TGN46 retrograde transport (Lieu et al, 2007; Derby et al, 2007). A fifth TGN-localized Golgin, TMF1, may also function similarly in retrograde transport from the early endosomes as it has been shown to interact with RAB6 and to be required for retrograde transport of Shiga toxin (Fridmann-Sirkis et al, 2004; Yamane et al, 2007).

R-HSA-6814094 (Reactome) Two hybrid screening with human ARL1 as bait identified ARFIP2 as a novel ARL1:GTP-interacting partner (Van Valkenburgh et al, 2001). Interaction between ARFIP2 and ARL1 increases the amount of ARL1:GTP four-fold , although the significance of this is not clear (Van Vlakenburgh et al, 2001). ARFIP2 is also known to interact with RAC1 and to influence membrane ruffling (van Aelst et al, 1996; Tarricone et al, 2001)
R-HSA-6814096 (Reactome) Two hybrid screening with human ARL1 as bait identified SCOC as a novel ARL1:GTP-interacting partner (Van Valkenburgh et al, 2001). SCOC (short coiled coil) shares 26% identity and 51% homology with GOLGA2, binds ARL1:GTPagamma S as assessed by affinity chromatography and shows extensive colocalization wtih beta-COP and ARL1 at the Golgi, however the role of this complex is not known (Van Valkenbrugh et al, 2001). SCOC is also known to play roles in autophagy, as part of a complex with FEZ1 (McKnight et al, 2012; reviewed in Joachim et al, 2012).
R-HSA-6814670 (Reactome) ATP hydrolysis by RHOBTB is thought to promote uncoating of the late endosome-derived vesicle, releasing PLIN3/TIP47 in preparation for vesicle fusion (Espinosa et al, 2009; reviewed in Pfeffer, 2011).
R-HSA-6814671 (Reactome) After capture at the trans-Golgi network by SNAREs and tethering factors, late endosome-derived vesicles undergo membrane fusion, delivering cargo and the cis-SNARE complex to the TGN membrane. The details of this fusion event are not fully established (reviewed in Pfeffer, 2011).
R-HSA-6814674 (Reactome) RAB9 positive vesicles from the late endosomes are tethered at the trans-Golgi network (TGN) through interaction with the GARP complex, the TGN-specific Golgin GCC2 and a t-SNARE complex consisting of STX10, STX16 and VTI1A (Hayes et al, 2009; Derby et al, 2007; Reddy et al, 2006; Ganley et al, 2008; Perez-Victoria et al, 2009; Lombardi et al, 1993; Lieu et al, 2007; reviewed in Chia and Gleeson, 2014)
R-HSA-6814675 (Reactome) Retrograde traffic of mannose-6-phosphate receptors (M6PRs) from the late endosome depends on RAB9 (Lombardi et al, 1993; Riederer et al, 1994; Barbero et al, 2002; reviewed in Pfeffer, 2011). Cargo recognition at the late endosome is mediated by the RAB9-interacting protein PLIN3/TIP47, which concentrates retrograde cargo into VAMP3 RAB9 positive vesicles (Diaz et al, 1998; Carroll et al, 2001; Reddy et al, 2006; Ganley et al, 2008). RABEPK is another RAB9:GTP interacting protein that is required for retrograde transport of M6PR to the TGN (Diaz et al, 1997). At the trans-Golgi network, RAB9 and PILN3 interact with the atypical RHO GTPase related protein RHOBTB3. This interaction is required for the TGN-localization of RAB9 M6PR positive vesicles. Interaction of RAB9 with the C-terminal domain of RHOBTB3 relieves an inhibitory intramolecular interaction in RHOBTB3, allowing the N-terminal domain to achieve maximal ATP hydrolysis, which is thought to promote the release of PLIN3/TIP47 as a precursor to vesicle fusion at the TGN (Espinosa et al, 2009)
R-HSA-6814676 (Reactome) After membrane fusion, the 4-membered cis-SNARE complex is dissociated in an ATP-dependent manner by SNAP and NSF (Mayer et al, 1996; Sollner et al, 1993; reviewed in Jahn and Scheller, 2006; Sudhof and Rothman, 2009).
R-HSA-6814678 (Reactome) NSF-dependent hydrolysis of ATP is required to disassociate the cis-SNARE complex, releasing the SNAREs for further rounds of membrane fusion (Mayer et al, 1996; Muller et al, 1999; Muller et al, 2002; Otto et al, 1997; Whiteheart et al, 2004; Yu et al, 1999; Zhao et al, 2012; Shah et al, 2015; reviewed in Sudhof and Rothman, 2009).
R-HSA-6814682 (Reactome) After capture at the trans-Golgi network by SNAREs and tethering factors, early endosome-derived vesicles undergo membrane fusion, delivering cargo and the cis-SNARE complex to the TGN membrane. The details of this fusion event are not fully established (reviewed in Pfeffer, 2011).
R-HSA-6814683 (Reactome) NSF-dependent hydrolysis of ATP is required to disassociate the cis-SNARE complex, releasing the SNAREs for further rounds of membrane fusion (Mayer et al, 1996; Muller et al, 1999; Muller et al, 2002; Otto et al, 1997; Whiteheart et al, 2004; Yu et al, 1999; Zhao et al, 2012; Shah et al, 2015; reviewed in Sudhof and Rothman, 2009).
R-HSA-6814684 (Reactome) After membrane fusion, the 4-membered cis-SNARE complex is dissociated in an ATP-dependent manner by SNAP and NSF (Mayer et al, 1996; Sollner et al, 1993; reviewed in Jahn and Scheller, 2006; Sudhof and Rothman, 2009).
R-HSA-8847534 (Reactome) RAB GAP USP6NL stimulates the GTPase activity of RAB43, promoting hydrolysis of GTP. Both RAB43 and USP6NL have been identifed as contributing to the retrograde transport of Shiga toxin to the Golgi, however the details of their roles remain to be elucidated (Fuchs et al, 2007; Haas et al, 2007; reviewed in Pfeffer, 2011).
R-HSA-8847537 (Reactome) RAB43 contributes to the maintenance of Golgi structure and is required for the RAB6-dependent retrograde trafficking of Shiga toxin (Fuchs et al, 2007; Haas et al, 2007). RAB43 appears to be localized to the cis side of the Golgi, so the details of how and when it affects Shiga transport remain to be clarified (Dejgaard et al, 2007). Screens of human cells identified USP6NL as a RAB43-specific GTPase activating (GAP) protein that is also implicated in Shiga trafficking (Fuchs et al, 2007; Haas et al, 2007; reviewed in Pfeffer, 2011).
R-HSA-8847544 (Reactome) Dimeric medial Golgins CUX1 (also known as CASP) and GOLGA5 (also known as Golgin-84) act in conjunction with the COG complex to tether retrograde vesicles moving within the Golgi stacks (Bascom et al, 1999; Gillingham et al, 2002; Malsam et al, 2005; Sohda et al, 2007; Sohda et al, 2010; reviewedin Szul and Sztul, 2011). Intra-Golgi vesicles are COPI-dependent, but distinct from anterograde ERGIC-to-Golgi COPI vesicles by virtue of their cargo (generally returning Golgi and ER-resident enzymes to their appropriate location in the secretory pathway, and notably lacking p24 family members; other intra Golgi cargo includes toxins such as Shiga) and the SNARE complexes they interact with (Orci et al, 1997; Lanoix et al, 2001; Malsam et al, 2005). The yeast homologue of GOLGA5, COY1, shows a genetic interaction with yeast SNARE GOS1 (human GOSR1), suggesting the intra-Golgi vesicles may rely on a GOSR1:STX5:BET1L and YKT6 SNARE complex, though the identity of the t-SNARE complex remains to be substantiated (Gillingham et al, 2002; Sohda et al, 2010). Removal of the COPI-coat is required prior to CUX1- and GOLGA5-mediated vesicle tethering (Malsam et al, 2005). Intra-Golgi transport also depends on medial RAB protein RAB33b (Jiang et al, 2005; Valsdottir et al, 2001; Pusapati et al, 2012; Starr et al, 2010). Disruption of RAB33b abolishes retrograde traffic of Shiga toxin from the trans- to cis-Golgi, and abolishes the RAB6-dependent relocalization of Golgi resident enzymes. This suggests that RAB6 and RAB33b may form sequentially acting RAB cascade that mediates intra-Golgi traffic (Starr et al, 2010; Pusapati et al, 2012). RAB33b has also been shown to interact with the RAB6 GEF RIC1:RGP1, although the significance of this interaction is unclear. In addition, RAB33b interacts by co-immunoprecipitation with endosomal proteins RABEP1 (also known as Rabaptin-5), RABGEF1 (Rabex5) and KIF20A (Rabkinesin 6); the relevance of these interactions is likewise unknown (Valsdottir et al, 2001).
R-HSA-8847635 (Reactome) Formation of the cis-SNARE complex accompanies membrane fusion, releasing the intra-Golgi cargo into the subsequent Golgi stack and allowing tethering factors to be recycled for subsequent rounds of docking (reviewed in Sudhof and Rothman 2009; Hong and Lev, 2014).
R-HSA-8847637 (Reactome) The cis-SNARE complex of STX5:PalmC-YKT6:BET1L:GOSR1 binds the NSF hexamer and alpha-SNAPs prior to the energy dependent disassembly for reuse (reviewed in Sudhof and Rothman, 2009; Hong and Lev, 2014).
R-HSA-8847638 (Reactome) NSF-mediated ATP hydrolysis promotes disassembly of the cis-SNARE complex, allowing the SNAREs to be reused in subsequent rounds of vesicle fusion (reviewed in Sudhof and Rothman, 2009; Hong and Lev, 2014).
R-HSA-8847875 (Reactome) TRIP11, also known as GMAP210, is a cis-Golgi localized coiled coil Golgin with roles in anterograde and retrograde intra-Golgi trafficking (Infante et al, 1999; Pernet-Gallay et al, 2002). TRIP11 has an N-terminal amphipathic lipid packing sensor (ALPS) domain which binds preferentially to highly curved membranes such as those on veiscles, and a GRIP-related ARF binding (GRAB) domain at its C-terminus that binds to ARF1:GTP. This asymmetric binding allows TRIP11 to tether vesicles to the Golgi membrane. This asymmetric binding of TRIP11 is maintained in part by the fact that ARFGAP1 also contains an ALPS domain and therefore stimulates the GTPase activity of any ARF1:GTP that is present in the vesicular membrane (Drin et al, 2008; Cardenas et al, 2009; Gillingham et al, 2004).
R-HSA-8847880 (Reactome) Cytohesin (CYTH) proteins 1, 2, 3 and 4 are ARF guanine nucleotide exchange factors (GEFs) for ARF1 as well as other ARFs. Recruitment to the membrane is mediated by direct interaction with ARF1:GTP as well as an interaction between the CYTH plexstrin homology (PH) domain and the lipid membrane (Chardin et al, 1996; Betz et al, 1998; Mossessova et al, 1998; Cherfils et al, 1998; Franco et al, 1998; Osagawara et al, 2000; Malaby et al, 2013).
R-HSA-8847883 (Reactome) CYTH proteins stimulate the GTPase activity of ARF1, promoting the exchange of GTP for GDP and thereby inactivating ARF1 (Franco et al, 1998; Drin et al, 2008; reviewed in Jackson and Casanova, 2000).
R-HSA-8847887 (Reactome) Medial Golgi protein RAB33B binds to both components of the RAB6 GEF complex RIC1:RGP1, and interacts with the RIC1 subunit at a site that is distinct from the RAB6-interacting site. Activated RAB33B does not change the RAB6-directed GEF activity of the RIC1:RGP1 complex, nor does it affect RAB6 binding, however overexpression of RAB33B leads to loss of RAB6 from the Golgi (Starr et al, 2010; Pusapati et al, 2012). The significance of the interaction between RAB33B and the RIC1:RGP1 complex remains to be elucidated, however it is possible that RAB6 and RAB33B form a sequential RAB cascade that contributes to COPI-dependent retrograde traffic from the trans- to medial- Golgi.
R-HSA-8848484 (Reactome) Phospholipase A (PLA2) hydrolyzes the sn-2 position of phospholipids, releasing a fatty acid and a lysophospholipid (reviewed in Six and Dennis, 2000; Kudo and Murakami, 2002). A number studies have highlighted roles for a number of PLA2s in the maintenance of Golgi function and structure (de Figueiredo et al, 1998; de Figueiredo et al, 1999). PLAs may generate phospholipid and fatty acid products that recruit effectors of Golgi function and trafficking to the membrane or that affect downstream signaling pathways. Alternately, PLA2s may contribute directly to tubule formation at the Golgi through the production of the membrane-curvature inducing lysophospholipid (reviewed in Bechler et al, 2012). PLA2s may be recruited to the Golgi in response to changes in Ca2+ and/or cargo concentration that occur as a result of secretory traffic (Micaroni et al, 2010; San Pietro et al, 2009; Pulvirenti et al, 2008).
R-HSA-8849345 (Reactome) AGPAT3 is an acyltransferase that can act on lysophosphatidylcholine to generate phosphatidylcholine (Prasad et al, 2011; Echard at al, 1998). This activity may counter the membrane tubule-inducing activity of Golgi PLA2 enzymes, thus favouring COPI-dependent vesicle formation over COPI-indendent retrograde traffic. While many lysophospholipid acyltransferases are ER-localized, AGPAT3 has been shown to also be present at the Golgi membrane, making it well situated to counter PLA2 activity during membrane tubule formation (Drecktah et al, 2003; Schmidt et al, 2009; reviewed in Ha et al, 2012; Heffernan and Simpson, 2014).
R-HSA-8849348 (Reactome) COPI-independent retrograde traffic from the Golgi to the ER depends on RAB6 and involves formation of membrane tubules instead of classical transport vesicles. COPI-dependent and COPI-independent retrograde transport appear to have distinct cargo, as anti-COPI antibodies inhibit the traffic of KDEL-containing receptors, but not that of Shiga or Shiga-like toxins, or of Golgi-resident glycosylation enzymes (White et al, 1999; Girod et al, 1999). It is not yet clear how membrane tubules formation is initiated, however cargo type and concentration, as well as lipid composition may contribute (Martinez et al, 1997; Simpson et al, 2006; de Figueiredo et al, 1998; de Figueiredo et al, 1999; reviewed in Heffernan and Simpson 2014). The presence of sn2-lysophospholipids in the Golgi membrane generates curved membranes that are thought to favour tubule formation. Lysophospholipids are generated by the activity of phopholipase A2 enzymes that hydrolyze the fatty acid at the sn-2 position; this activity is counteracted by the activity of lysophospholipid acyltransferases (LPATs). The balance of these two activities at the Golgi membrane is thought to play a role in determining whether COPI-dependent or -independent transport is favoured (de Figueiredo et al, 1998; de Figueiredo et al, 1999; Schmidt et al, 2009; reviewed in Heffernan and Simpson, 2014). Recent studies have also implicated the coiled coil homodimer Bicaudal-D (BICD) proteins in COPI-independent retrograde traffic. BICD proteins bind RAB6:GTP with their C-terminal ends and the dynein:dynactin motor complex with their N-terminal ends and in this way are thought to facilitate the recruitment of motor proteins to the RAB6 retrograde pathway (Hoogenraad et al, 2001; Matanis et al, 2002; Young et al, 2005; Januschke et al, 2007).
R-HSA-8849350 (Reactome) Retrograde tubule formation may depend on the minus-end directed dynein-dynactin motor complex, which is recruited to the Golgi through interaction with both RAB6 and BICD (Short et al, 2002; Hoogenraad et al, 2001; Matanis et al, 2002; Young et al, 2005; Januschke et al, 2007). Interaction of dynein:dynactin with RAB6:GTP activates the motor protein by displacing the PAFAH1B1 protein, which otherwise keeps the motor "idling" (Yamada et al, 2013; reviewed in Heffernan and Simpson, 2014).
R-HSA-8849353 (Reactome) The RAB6 pathway moves select retrograde cargo from the Golgi to the ER in a motor-dependent manner, although the precise details of this translocation remain to be worked out (Girod et al, 1999; White et al, 1999; reviewed in Heffernan and Simpson, 2014). Active RAB18 at the ER membrane may contribute to targeting and fusion of COPI-independent retrograde carriers through interaction with ER-localized tethering factors (Dejgaard et al, 2008; Gerondopoulos et al, 2014; Gillingham et al, 2014)
R-HSA-8849748 (Reactome) Large scale screens have identified numerous RAB proteins that interact with components of the COG complex (Fukuda et al, 2008; Miller et al, 2013; reviewed in Willet et al, 2013). Although RAB proteins are known to play key roles in trafficking and Golgi structure and function, the significance of some of these interactions is not yet clear (Kelly et al, 2012; Liu et al, 2013; reviewed in Liu and Storrie, 2015).
R-HSA-8850040 (Reactome) RAB18 is a highly conserved RAB GTPase with roles in Golgi to ER trafficking, lipid droplet formation and the regulation of secretory granules and peroxisomes (Dejgaard et al, 2008; Gerondopoulos et al, 2014; Martin et al, 2005; Ozeki et al, 2005; Vazquez-Martinez et al, 2007; Gronemeyer et al, 2013). RAB18 is recruited to the ER membrane by the RAB18 GEF complex RAB3GAP1:RAB3GAP2, a complex that was initially identified and characterized for its GAP activity towards RAB3 (Gerondopoulos et al, 2013; Fukui et al, 1997; Nagano et al, 1998).
R-HSA-8850041 (Reactome) The RAB3GAP1:RAB3GAP2 complex promotes nucleotide exchange of RAB18 at the ER membrane, activating it (Gerondopoulos et al, 2014). How active RAB18 contributes to COPI-independent retrograde Golgi-to-ER traffic remains to be worked out, however a role in tubule tethering is postulated based on the interaction of RAB18 with components of the ER localized NRZ tethering factor (Dejgaard et al, 2008; Gerondopoulos et al, 2014; Gillingham et al, 2014).
RAB18:GDPR-HSA-8850040 (Reactome)
RAB1:GDPArrowR-HSA-6811427 (Reactome)
RAB1:GTP:GBF1:ARF:GDPArrowR-HSA-6811411 (Reactome)
RAB1:GTP:GBF1:ARF:GDPR-HSA-6811414 (Reactome)
RAB1:GTP:GBF1:ARF:GDPmim-catalysisR-HSA-6811414 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomer:p24 dimers:ARFGAPs:SEC22B:cargoArrowR-HSA-6811417 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomer:p24 dimers:ARFGAPs:SEC22B:cargoR-HSA-6811418 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomer:p24 dimers:ARFGAPs:SEC22B:cargomim-catalysisR-HSA-6811418 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomerArrowR-HSA-6811412 (Reactome)
RAB1:GTP:GBF1:ARF:GTP:coatomerR-HSA-6811417 (Reactome)
RAB1:GTP:GBF1:ARF:GTPArrowR-HSA-6811414 (Reactome)
RAB1:GTP:GBF1:ARF:GTPR-HSA-6811412 (Reactome)
RAB1:GTP:GBF1ArrowR-HSA-6811415 (Reactome)
RAB1:GTP:GBF1R-HSA-6811411 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargo:NBAS:RINT1:ZW10:STX18:USE1L:BNIP1ArrowR-HSA-6811423 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargo:NBAS:RINT1:ZW10:STX18:USE1L:BNIP1R-HSA-6811427 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargoArrowR-HSA-6811418 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:cargoR-HSA-6811426 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:kinesins:microtubulesArrowR-HSA-6811426 (Reactome)
RAB1:GTP:coatomer:p24 dimers:SEC22B:kinesins:microtubulesR-HSA-6811423 (Reactome)
RAB1:GTPR-HSA-6811415 (Reactome)
RAB33B:GTP:RIC1:RGP1ArrowR-HSA-8847887 (Reactome)
RAB33B:GTPArrowR-HSA-8847544 (Reactome)
RAB33B:GTPR-HSA-8847887 (Reactome)
RAB3GAP1:RAB3GAP2:RAB18:GDPArrowR-HSA-8850040 (Reactome)
RAB3GAP1:RAB3GAP2:RAB18:GDPR-HSA-8850041 (Reactome)
RAB3GAP1:RAB3GAP2:RAB18:GDPmim-catalysisR-HSA-8850041 (Reactome)
RAB3GAP1:RAB3GAP2:RAB18:GTPArrowR-HSA-8850041 (Reactome)
RAB3GAP1:RAB3GAP2R-HSA-8850040 (Reactome)
RAB43:GDP:USP6NLArrowR-HSA-8847534 (Reactome)
RAB43:GTP:USP6NLArrowR-HSA-8847537 (Reactome)
RAB43:GTP:USP6NLR-HSA-8847534 (Reactome)
RAB43:GTP:USP6NLmim-catalysisR-HSA-8847534 (Reactome)
RAB43:GTPArrowR-HSA-6811431 (Reactome)
RAB43:GTPR-HSA-8847537 (Reactome)
RAB6:GDP:RIC1:RGP1ArrowR-HSA-6811428 (Reactome)
RAB6:GDP:RIC1:RGP1R-HSA-6811429 (Reactome)
RAB6:GDP:RIC1:RGP1mim-catalysisR-HSA-6811429 (Reactome)
RAB6:GDPArrowR-HSA-6814682 (Reactome)
RAB6:GDPR-HSA-6811428 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargo:Dynein:Dynactin:microtubulesArrowR-HSA-8849350 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargo:Dynein:Dynactin:microtubulesR-HSA-8849353 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargoArrowR-HSA-8849348 (Reactome)
RAB6:GTP:BICD dimer:COPI-independent retrograde cargoR-HSA-8849350 (Reactome)
RAB6:GTP:COPI-independent retrograde Golgi-to-ER cargoArrowR-HSA-8849353 (Reactome)
RAB6:GTP:RIC1:RGP1:GARP complex:COG complex:AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:Golgin dimers:STX6:STX16:VTI1A:VAMP4:early endosome-to-TGN cargoArrowR-HSA-6811431 (Reactome)
RAB6:GTP:RIC1:RGP1:GARP complex:COG complex:AcM-ARFRP1:GTP:SYS1:MyrG-ARL1:GTP:Golgin dimers:STX6:STX16:VTI1A:VAMP4:early endosome-to-TGN cargoR-HSA-6814682 (Reactome)
RAB6:GTP:RIC1:RGP1ArrowR-HSA-6811429 (Reactome)
RAB6:GTP:RIC1:RGP1R-HSA-6811431 (Reactome)
RAB6:GTPR-HSA-8849348 (Reactome)
RAB9:GDPArrowR-HSA-6814671 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3:RHOBTB3:ATPArrowR-HSA-6814675 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3:RHOBTB3:ATPR-HSA-6814670 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3:RHOBTB3:ATPmim-catalysisR-HSA-6814670 (Reactome)
RAB9:GTP:PLIN3:p-RABEPK:late-endosome-to-TGN cargo:VAMP3R-HSA-6814675 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:STX16:STX10:VTI1A:GARP complex:GCC2 dimer:late-endosome-to-TGN cargoArrowR-HSA-6814674 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:STX16:STX10:VTI1A:GARP complex:GCC2 dimer:late-endosome-to-TGN cargoR-HSA-6814671 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:late endosome-to-TGN cargoArrowR-HSA-6814670 (Reactome)
RAB9:GTP:p-RABEPK:VAMP3:late endosome-to-TGN cargoR-HSA-6814674 (Reactome)
RABEPKArrowR-HSA-6814671 (Reactome)
RHOBTB3:ADPArrowR-HSA-6814670 (Reactome)
RHOBTB3:ATPR-HSA-6814675 (Reactome)
RIC1:RGP1ArrowR-HSA-6814682 (Reactome)
RIC1:RGP1R-HSA-6811428 (Reactome)
RIC1:RGP1R-HSA-8847887 (Reactome)
SCOC:MyrG-ARL1:GTPArrowR-HSA-6814096 (Reactome)
SCOCR-HSA-6814096 (Reactome)
SEC22B:STX18:USE1:BNIP1L:3xSNAPs:NSF hexamerArrowR-HSA-6811425 (Reactome)
SEC22B:STX18:USE1:BNIP1L:3xSNAPs:NSF hexamerR-HSA-6811422 (Reactome)
SEC22B:STX18:USE1:BNIP1L:3xSNAPs:NSF hexamermim-catalysisR-HSA-6811422 (Reactome)
SEC22B:STX18:USE1L:BNIP1ArrowR-HSA-6811427 (Reactome)
SEC22B:STX18:USE1L:BNIP1R-HSA-6811425 (Reactome)
SEC22BArrowR-HSA-6811422 (Reactome)
SEC22BR-HSA-6811417 (Reactome)
SNAPsArrowR-HSA-6811422 (Reactome)
SNAPsArrowR-HSA-6814678 (Reactome)
SNAPsArrowR-HSA-6814683 (Reactome)
SNAPsArrowR-HSA-8847638 (Reactome)
SNAPsR-HSA-6811425 (Reactome)
SNAPsR-HSA-6814676 (Reactome)
SNAPsR-HSA-6814684 (Reactome)
SNAPsR-HSA-8847637 (Reactome)
STX10:STX16:VTI1A:VAMP3:NSF hexamer:SNAPsArrowR-HSA-6814676 (Reactome)
STX10:STX16:VTI1A:VAMP3:NSF hexamer:SNAPsR-HSA-6814678 (Reactome)
STX10:STX16:VTI1A:VAMP3:NSF hexamer:SNAPsmim-catalysisR-HSA-6814678 (Reactome)
STX10:STX16:VTI1A:VAMP3ArrowR-HSA-6814671 (Reactome)
STX10:STX16:VTI1A:VAMP3R-HSA-6814676 (Reactome)
STX10:STX16:VTI1AR-HSA-6814674 (Reactome)
STX10ArrowR-HSA-6814678 (Reactome)
STX16ArrowR-HSA-6814678 (Reactome)
STX16ArrowR-HSA-6814683 (Reactome)
STX18:USE1L:BNIP1R-HSA-6811423 (Reactome)
STX18ArrowR-HSA-6811422 (Reactome)
STX5:PalmC-YKT6:BET1L:GOSR1:NSF hexamer:3xSNAPsArrowR-HSA-8847637 (Reactome)
STX5:PalmC-YKT6:BET1L:GOSR1:NSF hexamer:3xSNAPsR-HSA-8847638 (Reactome)
STX5:PalmC-YKT6:BET1L:GOSR1:NSF hexamer:3xSNAPsmim-catalysisR-HSA-8847638 (Reactome)
STX5:PalmC-YKT6:BET1LR-HSA-8847544 (Reactome)
STX5ArrowR-HSA-8847638 (Reactome)
STX6:STX16:VTI1A:VAMP4:NSF hexamer:3xSNAPsArrowR-HSA-6814684 (Reactome)
STX6:STX16:VTI1A:VAMP4:NSF hexamer:3xSNAPsR-HSA-6814683 (Reactome)
STX6:STX16:VTI1A:VAMP4:NSF hexamer:3xSNAPsmim-catalysisR-HSA-6814683 (Reactome)
STX6:STX16:VTI1A:VAMP4ArrowR-HSA-6814682 (Reactome)
STX6:STX16:VTI1A:VAMP4R-HSA-6814684 (Reactome)
STX6:STX16:VTI1AR-HSA-6811431 (Reactome)
STX6ArrowR-HSA-6814683 (Reactome)
STX:PalmC-YKT6:BET1L:GOSR1ArrowR-HSA-8847635 (Reactome)
STX:PalmC-YKT6:BET1L:GOSR1R-HSA-8847637 (Reactome)
SYS1R-HSA-6814088 (Reactome)
TGN Golgin dimersR-HSA-6814091 (Reactome)
TRIP11:cargoR-HSA-8847875 (Reactome)
USE1ArrowR-HSA-6811422 (Reactome)
USP6NLR-HSA-8847537 (Reactome)
VAMP3ArrowR-HSA-6814678 (Reactome)
VAMP4:early

endosome-to-TGN

cargo
R-HSA-6811431 (Reactome)
VAMP4ArrowR-HSA-6814683 (Reactome)
VTI1AArrowR-HSA-6814678 (Reactome)
VTI1AArrowR-HSA-6814683 (Reactome)
cPLA2smim-catalysisR-HSA-8848484 (Reactome)
coatomerArrowR-HSA-6811427 (Reactome)
coatomerR-HSA-6811412 (Reactome)
early

endosome-to-TGN

cargo
ArrowR-HSA-6814682 (Reactome)
fatty acidArrowR-HSA-8848484 (Reactome)
intra-Golgi

cargo:GOLGA5

dimer:GOSR1
R-HSA-8847544 (Reactome)
intra-Golgi cargoArrowR-HSA-8847635 (Reactome)
late-endosome-to-TGN cargoArrowR-HSA-6814671 (Reactome)
other

COG-interacting

RABs
R-HSA-8849748 (Reactome)
other COG interacting snaresR-HSA-6811433 (Reactome)
p24 dimersArrowR-HSA-6811427 (Reactome)
p24 dimersR-HSA-6811417 (Reactome)
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