Globo series sphingolipid metabolism (Mus musculus)

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1, 2B4galt familyB3galt5type IV HS_id 26Forssman antigena3GalT familya3fucT familyB3galnt1GB3Gbgt1Type IV B antigenB6glcnacT familyType IV A antigenGalβ1-3(GlcNAcβ1-6)GalNAcβ1-3Galα1-4Galβ1-4Glcβ-Cers_id 22Globoside IGB4Cera3GalNAcT familyFut2Para-Forssman x3bS_id=20Galβ1-3(Galβ1-4GlcNAcβ1-6)GalNAcβ1-3Galα1-4Galβ1-4Glcβ-Cer S-id 23St3gal familySSEA-3 antigenS_id=21SSEA-4 antigen S-id 24globo-Lex-9 S_id 25


Description

Globoseries sphingolipid biosynthesis- partial

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Quality Tags

Ontology Terms

 

Bibliography

  1. Merril AH Jr; ''SphinGOMAP--a web-based biosynthetic pathway map of sphingolipids and glycosphingolipids.''; Glycobiology, 2005 PubMed Europe PMC Scholia
  2. ''Handbook of Glycosyltransferases and Related Genes''; https://doi.org/10.1007/978-4-431-67877-9, 2002 DOI Scholia

History

View all...
CompareRevisionActionTimeUserComment
125906view15:13, 17 March 2023JmillanacostaAnnotation connection
125832view06:36, 13 March 2023EgonwThat was not a LM identifier
125109view13:04, 23 January 2023Conroy lipidsadded a Rhea, some ECs
124887view13:49, 29 December 2022EgonwManually added the DOI identifier as identifier too
124878view20:28, 19 December 2022Conroy lipids
124877view20:27, 19 December 2022Conroy lipidsaddmissing hypotetical conversion
124876view17:59, 19 December 2022Conroy lipidsModified description
124875view17:51, 19 December 2022Conroy lipidsadded all componets for sphingomap of this pathway
124830view15:26, 13 December 2022Conroy lipids
124829view15:25, 13 December 2022Conroy lipids
124828view15:21, 13 December 2022Conroy lipidsfix odd symbols, missing link
124827view14:45, 13 December 2022Conroy lipidsOntology Term : 'globoside metabolic pathway' added !
124826view14:44, 13 December 2022Conroy lipidsOntology Term : 'lipid metabolic pathway' added !
124825view14:42, 13 December 2022Conroy lipidsremove odd symbols from title
124824view13:59, 13 December 2022Conroy lipidsNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
B3galnt1GeneProductQ920V1 (Uniprot-TrEMBL)
B3galt5GeneProductQ9JI67 (Uniprot-TrEMBL)
B4galt familyGeneProduct EC:2.4.1.22
B6glcnacT familyProteinEC:
Forssman antigenMetaboliteLMSP0502AC00 (LIPID MAPS)
Fut2GeneProductQ9JL27 (Uniprot-TrEMBL)
GB3MetaboliteLMSP0502AA00 (LIPID MAPS)
Galβ1-3(Galβ1-4GlcNAcβ1-6)GalNAcβ1-3Galα1-4Galβ1-4Glcβ-Cer S-id 23MetaboliteLMSP0502AG00 (LIPID MAPS)
Galβ1-3(GlcNAcβ1-6)GalNAcβ1-3Galα1-4Galβ1-4Glcβ-Cer s_id 22MetaboliteLMSP0502AF00 (LIPID MAPS)
Gbgt1GeneProductQ8VI38 (Uniprot-TrEMBL)
Globoside I GB4CerMetaboliteLMSP0502AB00 (LIPID MAPS)
Para-Forssman x3b S_id=20MetaboliteLMSP0502AD00 (LIPID MAPS)
SSEA-3 antigen S_id=21MetaboliteLMSP0502AE00 (LIPID MAPS)
SSEA-4 antigen S-id 24MetaboliteLMSP0601AB00 (LIPID MAPS)
St3gal familyProtein
Type IV A antigenMetaboliteLMSP0502AJ00 (LIPID MAPS)
Type IV B antigenMetabolitetype IV B antigen (LIPID MAPS)
a3GalNAcT familyProtein
a3GalT familyProtein
a3fucT familyGeneProduct
globo-Lex-9 S_id 25MetaboliteLMSP0502AH00 (LIPID MAPS)
type IV H S_id 26MetaboliteLMSP0502AI00 (LIPID MAPS)

Annotated Interactions

SourceTargetTypeDatabase referenceComment
GB3Globoside I GB4Cermim-conversion22253 (Rhea)
Globoside I GB4CerForssman antigenmim-conversion22165 (Rhea)
Globoside I GB4Cermim-conversion48037 (Rhea)
SSEA-3 antigen S_id=21mim-conversion41997 (Rhea)
SSEA-3 antigen S_id=21type IV H S_id 26mim-conversion42045 (Rhea)
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