De novo biosynthesis of pyrimidine deoxyribonucleotides (Saccharomyces cerevisiae)

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reduced flavodoxinNH3UDPdUDPoxidized thioredoxinH2Ooxidized thioredoxinH2OH2Ooxidized flavodoxinUTPoxidized flavodoxinreduced thioredoxinH2Oreduced thioredoxindUTP7,8-dihydrofolatedTTPCTPH2OH2OdUMPADPADPdCMPCDPRNR2pyrophosphateATP5,10-methylene-THFATPYNK1dUMPRNR1dTDPRNR3RNR1dCDPDUT1CDC21ADPADPATPRNR4RNR3CDC8YNK1dTMPdCTPATPCDC8ATPRNR2ADPRNR4


Description

No description

Comments

GenMAPP remarks 
Based on http://pathway.yeastgenome.org/biocyc/

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Quality Tags

Ontology Terms

 

Bibliography

  1. ''de novo biosynthesis of pyrimidine deoxyribonucleotides''; YeastGenome,

History

View all...
CompareRevisionActionTimeUserComment
135637view04:54, 8 October 2024KhanspersOntology Term : 'classic metabolic pathway' added !
135636view04:50, 8 October 2024Khanspersremoved GenMAPP comments and updated reference
135635view04:49, 8 October 2024KhanspersModified description
135634view04:48, 8 October 2024Khanspersoverhaul
124941view06:57, 3 January 2023EgonwMore metabolites as DataNode and connected lines
117280view10:46, 20 May 2021EweitzModified title
107020view13:47, 17 September 2019MaintBotHMDB identifier normalization
87228view14:47, 19 July 2016SusanOntology Term : 'de novo pyrimidine biosynthetic pathway' added !
87227view14:47, 19 July 2016SusanOntology Term : 'PW:0000861' removed !
87225view14:44, 19 July 2016SusanOntology Term : 'pyrimidine biosynthetic pathway' added !
72053view17:07, 24 October 2013Mkutmonupdated annotation for pyrophosphate
69864view17:26, 11 July 2013EgonwMarked a few DataNodes with CAS registry numbers as metabolites.
69612view20:33, 8 July 2013MaintBotUpdated to 2013 gpml schema
41845view04:50, 2 March 2011MaintBotRemoved redundant pathway information and comments
20753view11:29, 14 November 2008MaintBot[[Pathway:Saccharomyces cerevisiae:De Novo Biosynthesis of Pyrimidine Deoxyribonucleotides]] moved to [[Pathway:WP36]]: Moved to stable identifier
12684view07:57, 17 May 2008MaintBotautomated metabolite conversion
8687view14:06, 7 January 2008MaintBotAdded to category $category
8685view14:06, 7 January 2008M.BraymerUploaded new pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
5,10-methylene-THFMetabolite31690-11-6 (CAS)
7,8-dihydrofolateMetabolite
ADPMetabolite58-64-0 (CAS)
ATPMetabolite1927-31-7 (CAS)
CDC21GeneProductS000005600 (SGD)
CDC8GeneProductS000003818 (SGD)
CDPMetabolite63-38-7 (CAS)
CTPMetabolite
DUT1GeneProductS000000456 (SGD)
H2OMetabolite
NH3Metabolite
RNR1GeneProductS000000872 (SGD)
RNR2GeneProductS000003563 (SGD)
RNR3GeneProductS000001328 (SGD)
RNR4GeneProductS000003412 (SGD)
UDPMetabolite
UTPMetabolite
YNK1GeneProductS000001550 (SGD)
dCDPMetabolite800-73-7 (CAS)
dCMPMetabolite1032-65-1 (CAS)
dCTPMetabolite2056-98-6 (CAS)
dTDPMetabolite491-97-4 (CAS)
dTMPMetabolite365-07-1 (CAS)
dTTPMetabolite
dUDPMetabolite
dUMPMetabolite964-26-1 (CAS)
dUTPMetabolite
oxidized flavodoxinMetabolite
oxidized thioredoxinMetabolite
pyrophosphateMetaboliteHMDB0000250 (HMDB)
reduced flavodoxinMetabolite
reduced thioredoxinMetabolite

Annotated Interactions

No annotated interactions
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