GPCRs, other (Mus musculus)

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1, 2FragmentsVomeronasal receptors (V1R & V3R)Putative / unclassified GPCRsSmoothenedOther chemokine receptorsOlfr13Olfr59V1rb8Gpr7Q9JM39Olfr62Edg8MrgprhQ9ERX6Gpr2Olfr48Q9JM17V2r5Olfr1Adrb1V1ra6Q9JM34Pthr2Olfr45Olfr55Drd5Irx6Q9JM31Olfr42Olfr44Olfr161Olfr395Fzd9Vipr1V1rd7Olfr138Olfr642Gpr37l1Gpr132Olfr50V1ra8Olfr43CalcrCnr1V1rb2V1ra3Q9EPY6V1rd6Olfr51Oprk1Q9JM30Q9JM41Ccr7Q9JM24Fzd2V1rc7Gpr146Olfr32Gpr88Q9JHH0Ltb4r2Q9ERX4V1rd1Q9JM27RrhCasr6530406P05RikOlfr701Olfr412Celsr1Edg1Cd97Olfr3V1rc1Olfr6Q9JM42Olfr402V1rb6V1rc4Gprc2a-rs2V1rd2Tas1r1Q9ESG1_MOUSEOlfr54Olfr58Olfr410Q9JM36V1rb4Olfr12V1rb1V1ra5Olfr403Olfr22-ps1Olfr31Olfr53Olfr33Q9JM22Q9JM18Q9JM25Drd2Adora1Olfr28Olfr56Gpr34Olfr10Htr1daV1rd14Olfr11Olfr26DfyQ9JM23Fzd5Olfr61Olfr18Olfr154Drd1aQ9ERY2V1rc9Olfr9Olfr24V1ra2Q9WU87_MOUSEV1ra9Htr1dV2r7Fzd1Q9JM19Olfr30Q9JM37Trhr2Q9ERY7Gpr73Celsr3V1rc8V1rc2Adrb2Q9EPY8Mc4rV1ra1Q9EPV2Olfr586EdnraV1rb9Olfr23Olfr1355Gpr39Olfr60V1rd4Q61071V1ra4Olfr1353Q9JM28Q9ERW4Celsr2Q9JHK3Q9JM33Q9ERY0Olfr394V1rd9V1ra7Edg5SmoOlfr4Olfr46Mtnr1bOlfr47Adora3Gpr143Opn1lwGrm1V1rb3V1rc5Olfr19Xcr1Olfr7Gprc2a-rs3Gabbr1Gpr56V1rc6Q9ERX0Olfr25Olfr5Gpr83GhsrOlfr29-ps1Q9JM29Olfr27Htr1dbOlfr2V1rd3Oprl1Olfr52Olfr57Olfr382Gpr84Fzd7V2r6Gpr115Cysltr1Olfr397Olfr8Gprc2a-rs1Htr1aQ9ESF9Q9JM21V2r3Sstr5V1rc3Oprm1V1rb7Olfr20Tacr3Q9JM40Q9JM26Grca


Description

This pathway was created using the GPCRDB (Horn et al., 1998), http://www.cmbi.kun.nl/7tm/. The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used by Karchin et al. (Bioinformatics, 2002, pg. 147-159). The labels indicate children and grandchildren of the various classes of GPCRs as described by these references.

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Quality Tags

Ontology Terms

 

Bibliography

  1. Karchin R, Karplus K, Haussler D; ''Classifying G-protein coupled receptors with support vector machines''; Bioinformatics, 2002 PubMed Europe PMC Scholia
  2. Horn F, Weare J, Beukers MW, Hörsch S, Bairoch A, Chen W, Edvardsen O, Campagne F, Vriend G.; ''GPCRDB: an information system for G protein-coupled receptors''; Nucleic Acids Research , 1998 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
128009view13:53, 21 January 2024EweitzImprove graphical alignment, fix truncated gene node
128008view13:50, 21 January 2024EweitzAggregations seem to be simple groupings, not quarternary molecular complexes
128007view13:39, 21 January 2024EweitzAdd formal reference for Karchin et al., based on note in description
128006view13:33, 21 January 2024EweitzAdd formal literature reference, based on note in description
128005view13:24, 21 January 2024EweitzStack node column
128004view13:22, 21 January 2024Eweitz(Text label update in right panel didn't propagate to diagram)
128003view13:21, 21 January 2024EweitzUse proper mouse gene name. MGI:2148530 is alternative ID for canonical ID MGI:2148530.
128002view13:16, 21 January 2024EweitzFix truncated gene node, standardize case
117892view10:24, 23 May 2021EweitzModified title
78413view10:25, 7 January 2015MaintBotadded missing graphIds
71332view17:18, 17 October 2013MaintBotAutomated update of data sources
69164view18:19, 8 July 2013MaintBotUpdated to 2013 gpml schema
67324view10:37, 26 June 2013Christine ChichesterOntology Term : 'G protein mediated signaling pathway' added !
62667view18:27, 1 May 2013MaintBotUpdated Ensembl and UniProt data source
62665view18:15, 1 May 2013MaintBotUpdated Ensembl and UniProt data source
54691view11:58, 7 December 2012Andra
54690view11:56, 7 December 2012AndraRDF Tidy
41352view00:26, 2 March 2011MaintBotRemoved redundant pathway information and comments
34577view22:13, 21 December 2009KhanspersModified description
34564view21:37, 21 December 2009Khanspersdescription
34563view21:36, 21 December 2009KhanspersModified description
34562view21:35, 21 December 2009Khanspersdescription
34561view21:34, 21 December 2009KhanspersModified description
33385view14:41, 30 November 2009MaintBotRemoved group label
32967view23:05, 28 September 2009MaintBotAdded xrefs
32707view21:26, 1 September 2009MaintBotAdded groups
32706view21:22, 1 September 2009MaintBotReverted to version '11:29, 14 November 2008' by MaintBot
30832view00:01, 30 July 2009MaintBotConverted from Homo sapiens
20763view11:29, 14 November 2008MaintBot[[Pathway:Mus musculus:GPCRDB Other]] moved to [[Pathway:WP41]]: Moved to stable identifier
8122view13:46, 7 January 2008MaintBot[[Pathway:Mouse:GPCRDB Other]] moved to [[Pathway:Mus musculus:GPCRDB Other]]: Renaming species
7682view16:09, 18 December 2007MaintBotfixed category names
7426view12:42, 4 November 2007MaintBotAdded categories to GPML
19492view22:19, 22 May 2007BruceConklingpml file for [[Mouse:GPCRDB_Other]]
6448view22:19, 22 May 2007Nsalomonisgpml file for [[Mouse:GPCRDB_Other]]

External references

DataNodes

View all...
NameTypeDatabase referenceComment
6530406P05RikGeneProduct76206 (Entrez Gene)
Adora1GeneProduct11539 (Entrez Gene)
Adora3GeneProduct11542 (Entrez Gene)
Adrb1GeneProduct11554 (Entrez Gene)
Adrb2GeneProduct11555 (Entrez Gene)
CalcrGeneProduct12311 (Entrez Gene)
CasrGeneProduct12374 (Entrez Gene)
Ccr7GeneProduct12775 (Entrez Gene)
Cd97GeneProduct26364 (Entrez Gene)
Celsr1GeneProduct12614 (Entrez Gene)
Celsr2GeneProduct53883 (Entrez Gene)
Celsr3GeneProduct107934 (Entrez Gene)
Cnr1GeneProduct12801 (Entrez Gene)
Cysltr1GeneProduct58861 (Entrez Gene)
DfyGeneProduct13349 (Entrez Gene)
Drd1aGeneProduct13488 (Entrez Gene)
Drd2GeneProduct13489 (Entrez Gene)
Drd5GeneProduct13492 (Entrez Gene)
Edg1GeneProduct13609 (Entrez Gene)
Edg5GeneProduct14739 (Entrez Gene)
Edg8GeneProduct94226 (Entrez Gene)
EdnraGeneProduct13617 (Entrez Gene)
Fzd1GeneProduct14362 (Entrez Gene)
Fzd2GeneProduct57265 (Entrez Gene)
Fzd5GeneProduct14367 (Entrez Gene)
Fzd7GeneProduct14369 (Entrez Gene)
Fzd9GeneProduct14371 (Entrez Gene)
Gabbr1GeneProduct54393 (Entrez Gene)
GhsrGeneProduct208188 (Entrez Gene)
Gpr115GeneProduct78249 (Entrez Gene)
Gpr132GeneProduct56696 (Entrez Gene)
Gpr143GeneProduct18241 (Entrez Gene)
Gpr146GeneProduct80290 (Entrez Gene)
Gpr2GeneProduct12777 (Entrez Gene)
Gpr34GeneProduct23890 (Entrez Gene)
Gpr37l1GeneProduct171469 (Entrez Gene)
Gpr39GeneProduct71111 (Entrez Gene)
Gpr56GeneProduct14766 (Entrez Gene)
Gpr7GeneProduct14769 (Entrez Gene)
Gpr73GeneProduct58182 (Entrez Gene)
Gpr83GeneProduct14608 (Entrez Gene)
Gpr84GeneProduct80910 (Entrez Gene)
Gpr88GeneProduct64378 (Entrez Gene)
Gprc2a-rs1GeneProduct110931 (Entrez Gene)
Gprc2a-rs2GeneProduct12376 (Entrez Gene)
Gprc2a-rs3GeneProduct12377 (Entrez Gene)
GrcaGeneProduct14788 (Entrez Gene)
Grm1GeneProduct14816 (Entrez Gene)
Htr1aGeneProduct15550 (Entrez Gene)
Htr1dGeneProduct15552 (Entrez Gene)
Htr1daGeneProduct15553 (Entrez Gene)
Htr1dbGeneProduct15554 (Entrez Gene)
Irx6GeneProduct64379 (Entrez Gene)
Ltb4r2GeneProduct57260 (Entrez Gene)
Mc4rGeneProduct17202 (Entrez Gene)
MrgprhGeneProduct80978 (Entrez Gene)
Mtnr1bGeneProduct244701 (Entrez Gene)
Olfr10GeneProduct18307 (Entrez Gene)
Olfr11GeneProduct218066 (Entrez Gene)
Olfr12GeneProduct257890 (Entrez Gene)
Olfr1GeneProduct258923 (Entrez Gene)
Olfr13GeneProduct18310 (Entrez Gene)
Olfr1353GeneProduct259044 (Entrez Gene)
Olfr1355GeneProduct404334 (Entrez Gene)
Olfr138GeneProduct170648 (Entrez Gene)
Olfr154GeneProduct27216 (Entrez Gene)
Olfr161GeneProduct258859 (Entrez Gene)
Olfr18GeneProduct18315 (Entrez Gene)
Olfr19GeneProduct18316 (Entrez Gene)
Olfr20GeneProduct18318 (Entrez Gene)
Olfr2GeneProduct18317 (Entrez Gene)
Olfr22-ps1GeneProduct258209 (Entrez Gene)
Olfr23GeneProduct18321 (Entrez Gene)
Olfr24GeneProduct18322 (Entrez Gene)
Olfr25GeneProduct18323 (Entrez Gene)
Olfr26GeneProduct18324 (Entrez Gene)
Olfr27GeneProduct258826 (Entrez Gene)
Olfr28GeneProduct18326 (Entrez Gene)
Olfr29-ps1GeneProduct29848 (Entrez Gene)
Olfr30GeneProduct18329 (Entrez Gene)
Olfr31GeneProduct18330 (Entrez Gene)
Olfr3GeneProduct18328 (Entrez Gene)
Olfr32GeneProduct18331 (Entrez Gene)
Olfr33GeneProduct18332 (Entrez Gene)
Olfr382GeneProduct258435 (Entrez Gene)
Olfr394GeneProduct259009 (Entrez Gene)
Olfr395GeneProduct259007 (Entrez Gene)
Olfr397GeneProduct258343 (Entrez Gene)
Olfr402GeneProduct258703 (Entrez Gene)
Olfr403GeneProduct404316 (Entrez Gene)
Olfr410GeneProduct258702 (Entrez Gene)
Olfr412GeneProduct258153 (Entrez Gene)
Olfr42GeneProduct18341 (Entrez Gene)
Olfr4GeneProduct258986 (Entrez Gene)
Olfr43GeneProduct258706 (Entrez Gene)
Olfr44GeneProduct18343 (Entrez Gene)
Olfr45GeneProduct18344 (Entrez Gene)
Olfr46GeneProduct18345 (Entrez Gene)
Olfr47GeneProduct18346 (Entrez Gene)
Olfr48GeneProduct18347 (Entrez Gene)
Olfr50GeneProduct18350 (Entrez Gene)
Olfr51GeneProduct18351 (Entrez Gene)
Olfr5GeneProduct18349 (Entrez Gene)
Olfr52GeneProduct18352 (Entrez Gene)
Olfr53GeneProduct18353 (Entrez Gene)
Olfr54GeneProduct18354 (Entrez Gene)
Olfr55GeneProduct18355 (Entrez Gene)
Olfr56GeneProduct18356 (Entrez Gene)
Olfr57GeneProduct18357 (Entrez Gene)
Olfr58GeneProduct18358 (Entrez Gene)
Olfr586GeneProduct259115 (Entrez Gene)
Olfr59GeneProduct18359 (Entrez Gene)
Olfr60GeneProduct18361 (Entrez Gene)
Olfr61GeneProduct18362 (Entrez Gene)
Olfr62GeneProduct18363 (Entrez Gene)
Olfr6GeneProduct233670 (Entrez Gene)
Olfr642GeneProduct258326 (Entrez Gene)
Olfr701GeneProduct66786 (Entrez Gene)
Olfr7GeneProduct18371 (Entrez Gene)
Olfr8GeneProduct18372 (Entrez Gene)
Olfr9GeneProduct18373 (Entrez Gene)
Opn1lwGeneProduct20164 (Entrez Gene)
Oprk1GeneProduct18387 (Entrez Gene)
Oprl1GeneProduct18389 (Entrez Gene)
Oprm1GeneProduct18390 (Entrez Gene)
Pthr2GeneProduct213527 (Entrez Gene)
Q61071GeneProductQ61071 (Uniprot-TrEMBL)
Q9EPV2GeneProductQ9EPV2 (Uniprot-TrEMBL)
Q9EPY6GeneProductQ9EPY6 (Uniprot-TrEMBL)
Q9EPY8GeneProductQ9EPY8 (Uniprot-TrEMBL)
Q9ERW4GeneProductQ9ERW4 (Uniprot-TrEMBL)
Q9ERX0GeneProductQ9ERX0 (Uniprot-TrEMBL)
Q9ERX4GeneProductQ9ERX4 (Uniprot-TrEMBL)
Q9ERX6GeneProductQ9ERX6 (Uniprot-TrEMBL)
Q9ERY0GeneProductQ9ERY0 (Uniprot-TrEMBL)
Q9ERY2GeneProductQ9ERY2 (Uniprot-TrEMBL)
Q9ERY7GeneProductQ9ERY7 (Uniprot-TrEMBL)
Q9ESF9GeneProductQ9ESF9 (Uniprot-TrEMBL)
Q9ESG1_MOUSEGeneProductQ9ESG1 (Uniprot-TrEMBL)
Q9JHH0GeneProductQ9JHH0 (Uniprot-TrEMBL)
Q9JHK3GeneProductQ9JHK3 (Uniprot-TrEMBL)
Q9JM17GeneProductQ9JM17 (Uniprot-TrEMBL)
Q9JM18GeneProductQ9JM18 (Uniprot-TrEMBL)
Q9JM19GeneProductQ9JM19 (Uniprot-TrEMBL)
Q9JM21GeneProductQ9JM21 (Uniprot-TrEMBL)
Q9JM22GeneProductQ9JM22 (Uniprot-TrEMBL)
Q9JM23GeneProductQ9JM23 (Uniprot-TrEMBL)
Q9JM24GeneProductQ9JM24 (Uniprot-TrEMBL)
Q9JM25GeneProductQ9JM25 (Uniprot-TrEMBL)
Q9JM26GeneProductQ9JM26 (Uniprot-TrEMBL)
Q9JM27GeneProductQ9JM27 (Uniprot-TrEMBL)
Q9JM28GeneProductQ9JM28 (Uniprot-TrEMBL)
Q9JM29GeneProductQ9JM29 (Uniprot-TrEMBL)
Q9JM30GeneProductQ9JM30 (Uniprot-TrEMBL)
Q9JM31GeneProductQ9JM31 (Uniprot-TrEMBL)
Q9JM33GeneProductQ9JM33 (Uniprot-TrEMBL)
Q9JM34GeneProductQ9JM34 (Uniprot-TrEMBL)
Q9JM36GeneProductQ9JM36 (Uniprot-TrEMBL)
Q9JM37GeneProductQ9JM37 (Uniprot-TrEMBL)
Q9JM39GeneProductQ9JM39 (Uniprot-TrEMBL)
Q9JM40GeneProductQ9JM40 (Uniprot-TrEMBL)
Q9JM41GeneProductQ9JM41 (Uniprot-TrEMBL)
Q9JM42GeneProductQ9JM42 (Uniprot-TrEMBL)
Q9WU87_MOUSEGeneProductQ9WU87 (Uniprot-TrEMBL)
RrhGeneProduct20132 (Entrez Gene)
SmoGeneProduct319757 (Entrez Gene)
Sstr5GeneProduct20609 (Entrez Gene)
Tacr3GeneProduct21338 (Entrez Gene)
Tas1r1GeneProduct110326 (Entrez Gene)
Trhr2GeneProduct170732 (Entrez Gene)
V1ra1GeneProduct22296 (Entrez Gene)
V1ra2GeneProduct22297 (Entrez Gene)
V1ra3GeneProduct113845 (Entrez Gene)
V1ra4GeneProduct113846 (Entrez Gene)
V1ra5GeneProduct113847 (Entrez Gene)
V1ra6GeneProduct113848 (Entrez Gene)
V1ra7GeneProduct113849 (Entrez Gene)
V1ra8GeneProduct113850 (Entrez Gene)
V1ra9GeneProduct113851 (Entrez Gene)
V1rb1GeneProduct113852 (Entrez Gene)
V1rb2GeneProduct24112 (Entrez Gene)
V1rb3GeneProduct113853 (Entrez Gene)
V1rb4GeneProduct113854 (Entrez Gene)
V1rb6GeneProduct107797 (Entrez Gene)
V1rb7GeneProduct113855 (Entrez Gene)
V1rb8GeneProduct113856 (Entrez Gene)
V1rb9GeneProduct113857 (Entrez Gene)
V1rc1GeneProduct113858 (Entrez Gene)
V1rc2GeneProduct113859 (Entrez Gene)
V1rc3GeneProduct113860 (Entrez Gene)
V1rc4GeneProduct113861 (Entrez Gene)
V1rc5GeneProduct113862 (Entrez Gene)
V1rc6GeneProduct113863 (Entrez Gene)
V1rc7GeneProduct113864 (Entrez Gene)
V1rc8GeneProduct113865 (Entrez Gene)
V1rc9GeneProductMGI:2148530 (MGI)
V1rd14GeneProduct81011 (Entrez Gene)
V1rd1GeneProduct81017 (Entrez Gene)
V1rd2GeneProduct81016 (Entrez Gene)
V1rd3GeneProduct81015 (Entrez Gene)
V1rd4GeneProduct81014 (Entrez Gene)
V1rd6GeneProduct81013 (Entrez Gene)
V1rd7GeneProduct81012 (Entrez Gene)
V1rd9GeneProduct81010 (Entrez Gene)
V2r3GeneProduct22309 (Entrez Gene)
V2r5GeneProduct22311 (Entrez Gene)
V2r6GeneProduct22312 (Entrez Gene)
V2r7GeneProduct22313 (Entrez Gene)
Vipr1GeneProduct22354 (Entrez Gene)
Xcr1GeneProduct23832 (Entrez Gene)

Annotated Interactions

No annotated interactions

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