Transcriptional regulation of memory B cell differentiation (Homo sapiens)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none BCRPI3K/AKTMAPK signalingBCRBCRBCRBCRSYKLINMEF2CID3BCL2L1NF-KBCCDN2TCF3ICOSLGMEF2BIRF4TCF4POU2AF1POU2F2SLAMF1IL6SYKName: Transcriptional regulation of memory B cell differentiationOrganism: Homo sapiens


Description

Model for signalling pathways and transcription factors that regulate B cell commitment to the germinal centre (GC) fate. Boxes that indicate signalling molecules are coloured yellow, transcription regulators red, downstream gene targets turquoise and epigenetic modifiers purple. The B cell receptor (BCR), via its signalling subunits Igα and Igβ as well as downstream tyrosine kinases such as SYK and LYN, activates the mitogen-activated protein kinase (MAPK) and phosphoinositide 3-kinase (PI3K)/AKT pathways. MAPK signalling induces the expression of the transcriptional activator myocyte enhancer binding factor 2c (MEF2C), which promotes the transcription of B cell lymphoma-extra large (Bcl2l1) and cyclin D2 (Ccnd2). The expression of the transcriptional repressor inhibitor of DNA binding 3 (ID3) is reduced following B cell activation, allowing for transcription factor 3/4 (TCF3/4)-driven induction of Icosl and Mef2b transcription. PI3K/AKT and nuclear factor-κB (NF-κB) signalling also induce the expression of the transcription factor interferon regulatory factor 4 (IRF4). IRF4 and TCF3/4 induce the expression of the co-activator OBF1 (also known as POU class 2 homeobox associating factor 1 (POU2AF1)), which cooperates with OCT2 (also known as POU class 2 homeobox 2 (POU2F2)) to promote transcription of Slamf1, Syk and Il6. OBF1 and OCT2 can also induce the expression of the transcription factor SPI-B, which acts in a redundant fashion with PU.1 to enhance the transcription of genes encoding B cell surface receptors, such as Cd40, B cell activating factor receptor (Baffr), Toll-like receptor 4 (Tlr4) and Tlr9, and many components of the BCR signalling pathway, including Blnk and Btk. Although transiently elevated levels of IRF4 can induce the expression of B cell lymphoma 6 (BCL-6), sustained IRF4 levels will repress BCL-6 expression. BCL-6 expression is also induced by the transcription factors MEF2B and IRF8/PU.1 as well as the cytokines IL-4 and IL-21, which bind to their respective receptors (IL-4R and IL-21R) and induce signal transducer and activator of transcription 6 (STAT6)/STAT3 signalling. CD40 and/or TLR-driven NF-κB signalling, alongside PI3K/AKT signalling, will induce the expression of the transcription factor MYC, which promotes cellular proliferation by inducing the transcription of Ccnd2/Ccnd3 and the expression of the transcription factor E2F transcription factor 1 (E2F1). E2F1 induces expression of Ezh2 that encodes a Polycomb repressive complex 2 (PRC2) enzymatic component. Enhancer of zeste homologue 2 (EZH2) promotes cell cycle progression by repressing the expression of Cdkn1a, Cdkn2a and Cdkn1b, which encode cyclin-dependent kinase inhibitors. EZH2 also promotes E2F1 release from the retinoblastoma (Rb) protein via phosphorylation of Rb, thereby enhancing E2F1 activation and further EZH2 expression. BCL-6 can directly repress MYC expression, thereby limiting the number of cell divisions that GC B cells undergo. BCL-6 promotes GC B cell development through regulation of numerous genes controlling cellular processes including the DNA damage response, B cell migration, apoptosis, BCR and CD40 signalling, plasma cell differentiation and T cell:B cell interactions. Together, these transcriptional regulators allow for the precise control of GC initiation that is necessary to balance the competing needs of the immune system to induce a protective response while limiting immunopathology. Derived from https://pfocr.wikipathways.org/figures/PMC7538181__41577_2020_446_Fig1_HTML.html

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Bibliography

  1. Laidlaw BJ, Cyster JG; ''''; , PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
136863view03:26, 25 February 2025EweitzModified description
135858view22:18, 19 November 2024EweitzFix gene symbol, expand gene family
135757view12:03, 9 November 2024EgonwMoved the question mark identifier to a comment
135648view15:32, 14 October 2024EweitzOntology Term : 'B cell' added !
135647view15:30, 14 October 2024EweitzFormally link B cell receptor signaling pathway
135606view18:05, 6 October 2024EweitzConvert "Arrow" to "mim-stimulation"
135605view18:01, 6 October 2024EweitzConvert "Arrow" to "mim-stimulation"
135604view17:51, 6 October 2024EweitzRefine label placement
135603view17:48, 6 October 2024EweitzAdd "Germinal center development"
135602view17:44, 6 October 2024EweitzRefine BCR and CD placement, label "Epigenetic modifier", refine reference
135601view16:36, 6 October 2024EweitzModified description
135600view04:08, 6 October 2024EweitzOntology Term : 'CL:0000236' removed !
135599view04:07, 6 October 2024EweitzOntology Term : 'memory B cell' added !
135598view04:04, 6 October 2024EweitzOntology Term : 'B cell' added !
135597view04:00, 6 October 2024EweitzComplete reference
135596view03:59, 6 October 2024EweitzAdd literature reference
135595view03:55, 6 October 2024EweitzConnect nodes
135594view02:38, 6 October 2024EweitzArrange nodes
135593view01:08, 6 October 2024EweitzAdd more genes
135592view19:00, 5 October 2024EweitzCreate more genes
135591view17:30, 5 October 2024EweitzNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
GeneProduct? (Ensembl)
BCL2L1GeneProductENSG00000171552 (Ensembl)
BCRGeneProductENSG00000186716 (Ensembl)
CCDN2GeneProductENSG00000118971 (Ensembl)
ICOSLGGeneProductENSG00000160223 (Ensembl)
ID3GeneProductENSG00000117318 (Ensembl)
IL6GeneProductENSG00000136244 (Ensembl)
IRF4GeneProductENSG00000137265 (Ensembl)
LINGeneProductENSG00000186716 (Ensembl)
MAPK signalingPathwayWP382 (WikiPathways)
MEF2BGeneProductENSG00000213999 (Ensembl)
MEF2CGeneProductENSG00000081189 (Ensembl)
NF-KBPathway
PI3K/AKTPathway
POU2AF1GeneProductENSG00000110777 (Ensembl) OBF1 in source diagram
POU2F2GeneProductENSG00000028277 (Ensembl) OCT2 in source diagram
SLAMF1GeneProductENSG00000117090 (Ensembl)
SYKGeneProductENSG00000165025 (Ensembl)
TCF3GeneProductENSG00000071564 (Ensembl)
TCF4GeneProductENSG00000196628 (Ensembl)

Annotated Interactions

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