Ovarian infertility (Pan troglodytes)

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NucleusOoplasmNucleusOocyteGranulosa CellCytoplasmINHAPGRCEBPBSMPD1VDRSMPD1NR5A1CDKN1BEGR1GDF9GJA4GJA4SYNE2ESR2LHCGRBMPR1BPRLRZP3NCOR1PTGER2FSHRNRIP1CCND2ZP3MSH5ATMTF2DMLH1CYP19A1DMC1Fig-alphaZP2SMAD3CDK4DAZL


Description

Ovarian ’bottleneck’ genes associated with infertility A valuable approach to the study of infertility is the comparison of mutations of individual human and mouse genes associated with infertility phenotypes. The individual gene pages in the OKdb (Ovarian Kaleidoscope Database: http://ovary.stanford.edu) contain information on associated fertility phenotypes sorted by ovarian and nonovarian defects and by subfertility or infertility. If one searches for null mutations (under ’mutation type’) causing infertility (’infertile - ovarian defect’, under ’female fertility status’) in mice (under ’species’), 44 gene entries are found. The expression of these infertility genes in the oocyte and granulosa cells together with their cellular localization is presented in Ovarian Infertility gene map. The theca cell genes are not presented because most publications emphasize granulosa cell studies.

Comments

GenMAPP notes 
Ovarian ’bottleneck’ genes associated with infertility

A valuable approach to the study of infertility is the comparison of mutations of individual human and mouse genes associated with infertility phenotypes. The individual gene pages in the OKdb (Ovarian Kaleidoscope Database: http://ovary.stanford.edu) contain information on associated fertility phenotypes sorted by ovarian and nonovarian defects and by subfertility or infertility. If one searches for null mutations (under ’mutation type’) causing infertility (’infertile - ovarian defect’, under ’female fertility status’) in mice (under ’species’), 44 gene entries are found. The expression of these infertility genes in the oocyte and granulosa cells together with their cellular localization is presented in Ovarian Infertility gene map. The theca cell genes are not presented because most publications emphasize granulosa cell studies.

GenMAPP remarks 
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HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP34(r20749) with a 85% conversion rate.

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Bibliography

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History

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CompareRevisionActionTimeUserComment
116560view12:56, 7 May 2021EweitzModified title
89872view12:40, 6 October 2016MkutmonModified description
88265view14:30, 1 August 2016FehrhartOntology Term : 'infertility' added !
88264view14:30, 1 August 2016FehrhartOntology Term : 'granulosa cell' added !
88263view14:30, 1 August 2016FehrhartOntology Term : 'oocyte' added !
88262view14:30, 1 August 2016FehrhartOntology Term : 'urogenital disease pathway' added !
78377view10:22, 7 January 2015MaintBotadded missing graphIds
71961view23:31, 23 October 2013MaintBotremoved data source from nodes without identifier
70239view21:27, 15 July 2013MaintBotupdated to 2013 schema
62780view16:20, 2 May 2013MaintBotupdated uniprot data source
41598view02:01, 2 March 2011MaintBotRemoved redundant pathway information and comments
35772view00:12, 13 February 2010KhanspersMoved from Comments to Description
35769view00:11, 13 February 2010KhanspersModified description
34327view22:14, 9 December 2009MaintBotAutomatic update of empty xrefs
33550view09:40, 1 December 2009MaintBotRemoved group label
30454view21:27, 29 July 2009MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
ATMGeneProduct451530 (Entrez Gene)
BMPR1BGeneProduct461683 (Entrez Gene)
CCND2GeneProduct747123 (Entrez Gene)
CDK4GeneProduct452025 (Entrez Gene)
CDKN1BGeneProduct466947 (Entrez Gene)
CEBPBGeneProduct469969 (Entrez Gene)
CYP19A1GeneProduct453433 (Entrez Gene)
DAZLGeneProduct460209 (Entrez Gene)
DMC1GeneProduct458831 (Entrez Gene)
EGR1GeneProduct462097 (Entrez Gene)
ESR2GeneProduct452964 (Entrez Gene)
FSHRGeneProduct470371 (Entrez Gene)
Fig-alphaGeneProduct
GDF9GeneProduct471630 (Entrez Gene)
GJA4GeneProduct469273 (Entrez Gene)
INHAGeneProduct743866 (Entrez Gene)
LHCGRGeneProduct
MLH1GeneProduct747104 (Entrez Gene)
MSH5GeneProduct462565 (Entrez Gene)
NCOR1GeneProduct741384 (Entrez Gene)
NR5A1GeneProduct464724 (Entrez Gene)
NRIP1GeneProduct474071 (Entrez Gene)
PGRGeneProduct451502 (Entrez Gene)
PRLRGeneProduct461925 (Entrez Gene)
PTGER2GeneProduct467459 (Entrez Gene)
SMAD3GeneProduct748161 (Entrez Gene)
SMPD1GeneProduct450990 (Entrez Gene)
SYNE2GeneProduct746581 (Entrez Gene)
TF2DGeneProduct
VDRGeneProduct
ZP2GeneProduct453979 (Entrez Gene)
ZP3GeneProduct472662 (Entrez Gene)

Annotated Interactions

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