WikiPathways:Publications
From WikiPathways
About WikiPathways
| Pico et al. WikiPathways: Pathway Editing for the People. PLoS Biol 6(7) 2008 | The first article introducing WikiPathways and wiki-based pathway editing. |
| Kelder et al. Mining Biological Pathways Using WikiPathways Web Services. PLoS ONE 4(7), 2009 | This article describes the WikiPathways web service interface, with several use case examples. |
Selected citations
| Jennen et al. Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes. Drug Discov Today Aug 11, 2010 | Describes the creation of several biotransformation pathways at WikiPathways, and the visualization of microarray data on these pathways. |
| Emig et al. AltAnalyze and DomainGraph: analyzing and visualizing exon expression data. Nucleic Acids Research, 2010, Vol. 38, No. suppl_2 W755-W762 | This articles presents integrated tools for the analysis and visualization of alternative splicing data at multiple levels, including WikiPathways. |
| Pico et al. SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system. Nucleic Acids Research 2009 37(Database issue):D803-D809 | SNPLogic provides a comprehensive SNP selection, annotation and prioritization system for design and analysis of genotyping experiments. SNPLogic integrates many different types of SNP information, including association to biological pathways. |
