Seed Development (Oryza sativa)
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| Name | Type | Database reference | Comment |
|---|---|---|---|
| EF-1-d2 | GeneProduct | LOC_Os03g29260 (Rice Ensembl Gene)  | Elongation factor 1 beta 2 |
| EPSPS1 | GeneProduct | LOC_Os06g04280 (Rice Ensembl Gene) | 5-Enolpyruvylshikimate-3-phosphate synthase 1 |
| LOC_Os03g43910 | GeneProduct | LOC_Os03g43910 (Rice Ensembl Gene) | |
| 2-d-3-D phosphooctonate aldolase | GeneProduct | LOC_Os12g10784 (Rice Ensembl Gene) | |
| ABI5 | GeneProduct | LOC_Os01g64000 (Rice Ensembl Gene) | |
| ACO1 | GeneProduct | LOC_Os09g27750 (Rice Ensembl Gene) | |
| ADP ribosylation GTPase | GeneProduct | LOC_Os03g17020 (Rice Ensembl Gene) | |
| AHOX | GeneProduct | LOC_Os10g39030 (Rice Ensembl Gene) | Associated with HOX family protein, expressed (UniProt Q8LN25)- Assigned as AHOX by Nemeth D and Hanumappa M (08/19/2010) |
| ALDH7 | GeneProduct | LOC_Os09g26880 (Rice Ensembl Gene) | Needed for seed maturation and viability.
Expression Patterns during Seed Development Correspond with Pigment Accumulation Patterns in Seeds Plays a role in the removal of MDA that forms during seed desiccation |
| ALDP | GeneProduct | LOC_Os11g07020 (Rice Ensembl Gene) | Aldolase |
| AOPBP-L | GeneProduct | LOC_Os07g48570 (Rice Ensembl Gene) | |
| AOXDH | GeneProduct | LOC_Os03g31550 (Rice Ensembl Gene) | |
| AP-1gamma-1 | GeneProduct | LOC_Os06g07090 (Rice Ensembl Gene) | |
| AP2 domain | GeneProduct | LOC_Os03g64260 (Rice Ensembl Gene) | |
| AP37 | GeneProduct | LOC_Os01g58420 (Rice Ensembl Gene) | |
| APL1 | GeneProduct | LOC_Os05g50380 (Rice Ensembl Gene) | ADP-glucose Pyrophosphorylase large subunit 1 |
| APL2 | GeneProduct | LOC_Os01g44220 (Rice Ensembl Gene) | ADP-glucose Pyrophosphorylase large subunit 2, binding only happens with APS2b
SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF expression diminished during grain filling at high temperatures |
| APL3 | GeneProduct | LOC_Os03g52460 (Rice Ensembl Gene) | |
| APL4/ AGPL4 | GeneProduct | LOC_Os07g13980 (Rice Ensembl Gene) | |
| APRL3 | GeneProduct | LOC_Os02g51850 (Rice Ensembl Gene) | Disulfide Isomerase |
| APS1 | GeneProduct | LOC_Os09g12660 (Rice Ensembl Gene) | ADP-glucose Pyrophosphorylase small subunit 1 expression diminished during grain filling at high temperatures |
| APS2a | GeneProduct | LOC_Os08g25734 (Rice Ensembl Gene) | Also called AGPS2, ADP-glucose Pyrophosphorylase small subunit 2;
SSP genes examined was significantly suppressed in KD-RISBZ1/KD-RPBF has two different transcripts= a:in leaf, b:in endosperm; binding with APL2 and Down regulation by RISBZ1 only happens with APS2b, binding with APL1 only happens with APS2a expression diminished during grain filling at high temperatures |
| APT1 | GeneProduct | LOC_Os12g39860 (Rice Ensembl Gene) | Adenine phosphoribosyltransferase 1 |
| ARD2 | GeneProduct | LOC_Os03g06620 (Rice Ensembl Gene) | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2; Also called IDI1 and SIP2A |
| AREB | GeneProduct | LOC_Os05g41070 (Rice Ensembl Gene) | |
| ARF1 | GeneProduct | LOC_Os11g32110 (Rice Ensembl Gene) | |
| ATP synthase | GeneProduct | LOC_Os03g17070 (Rice Ensembl Gene) | |
| ATP synthetase a | GeneProduct | LOC_Os02g54624 (Rice Ensembl Gene) | |
| Acyl carrier | GeneProduct | LOC_Os07g12150 (Rice Ensembl Gene) | |
| Amy1A | GeneProduct | LOC_Os02g52710 (Rice Ensembl Gene) | |
| Amy2A | GeneProduct | LOC_Os06g49970 (Rice Ensembl Gene) | ABA-repressible and GA-inducible |
| Amy3A | GeneProduct | LOC_Os09g28400 (Rice Ensembl Gene) | |
| Amy3B/Amy3C | GeneProduct | LOC_Os09g28420 (Rice Ensembl Gene) | |
| Amy3D | GeneProduct | LOC_Os08g36910 (Rice Ensembl Gene) | |
| Amy3E | GeneProduct | LOC_Os08g36900 (Rice Ensembl Gene) | |
| Amy4A | GeneProduct | LOC_Os01g51754 (Rice Ensembl Gene) | |
| Ankyrin-like protein | GeneProduct | LOC_Os09g17329 (Rice Ensembl Gene) | Iron transporter |
| Anthranilate Phosphoribosyltransferase | GeneProduct | LOC_Os03g03450 (Rice Ensembl Gene) | |
| BADH2 | GeneProduct | LOC_Os08g32870 (Rice Ensembl Gene) | SCENTED KERNEL 2 (fragrance) betaine-aldehyde dehydrogenase 2 |
| BBTI4 | GeneProduct | LOC_Os01g03340 (Rice Ensembl Gene) | Bowman-Birk type bran trypsin inhibitor |
| BEIII | GeneProduct | LOC_Os06g26234 (Rice Ensembl Gene) | |
| BEI | GeneProduct | LOC_Os06g51084 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| BP5 | GeneProduct | LOC_Os01g18290 (Rice Ensembl Gene) | |
| BT1-1 | GeneProduct | LOC_Os05g07900 (Rice Ensembl Gene) | |
| BT1-2 | GeneProduct | LOC_Os02g10800 (Rice Ensembl Gene) | |
| BTB-TAZ | GeneProduct | LOC_Os01g66890 (Rice Ensembl Gene) | |
| BTB/POZ | GeneProduct | LOC_Os10g29390 (Rice Ensembl Gene) | 2-keto-3-deoxy-6-phosphogluconate aldolase |
| Bam 10 | GeneProduct | LOC_Os03g22790 (Rice Ensembl Gene) | |
| Bam 1 | GeneProduct | LOC_Os10g41550 (Rice Ensembl Gene) | |
| Bam 2 | GeneProduct | LOC_Os07g35940 (Rice Ensembl Gene) | |
| Bam 3 | GeneProduct | LOC_Os07g35880 (Rice Ensembl Gene) | |
| Bam 4 | GeneProduct | LOC_Os07g47120 (Rice Ensembl Gene) | |
| Bam 5 | GeneProduct | LOC_Os10g32810 (Rice Ensembl Gene) | |
| Bam 6 | GeneProduct | LOC_Os09g39570 (Rice Ensembl Gene) | |
| Bam 7 | GeneProduct | LOC_Os03g04770 (Rice Ensembl Gene) | |
| Bam 8 | GeneProduct | LOC_Os01g13550 (Rice Ensembl Gene) | |
| Bam 9 | GeneProduct | LOC_Os02g03690 (Rice Ensembl Gene) | |
| C3H1 | GeneProduct | LOC_Os01g07930 (Rice Ensembl Gene) | Zinc finger CCCH domain-containing protein Glutaredoxin-related |
| CACTA, En/Spm | GeneProduct | LOC_Os01g09220 (Rice Ensembl Gene) | |
| CCT/B-box zinc finger | GeneProduct | LOC_Os02g49230 (Rice Ensembl Gene) | |
| CDKA-1 | GeneProduct | LOC_Os03g02680 (Rice Ensembl Gene) | |
| CDKA-2 | GeneProduct | LOC_Os02g03060 (Rice Ensembl Gene) | |
| CIN1 | GeneProduct | LOC_Os02g33110 (Rice Ensembl Gene) | |
| CIN2 | GeneProduct | LOC_Os04g33740 (Rice Ensembl Gene) | |
| CIN3 | GeneProduct | LOC_Os04g33720 (Rice Ensembl Gene) | |
| CIN4 | GeneProduct | LOC_Os01g73580 (Rice Ensembl Gene) | |
| CIN5 | GeneProduct | LOC_Os04g56930 (Rice Ensembl Gene) | |
| CIN7 | GeneProduct | LOC_Os09g08072 (Rice Ensembl Gene) | |
| CKX2/ Gn1a | GeneProduct | LOC_Os01g10110 (Rice Ensembl Gene) | Cytokinin oxidase/dehydrogenase 2 |
| CML18 | GeneProduct | LOC_Os05g13580 (Rice Ensembl Gene) | |
| CPL1 | GeneProduct | LOC_Os07g10690 (Rice Ensembl Gene) | Seed Shattering |
| CR4 | GeneProduct | LOC_Os03g43670 (Rice Ensembl Gene) | homology with Crinkly4 |
| CRINKLY4 | GeneProduct | LOC_Os08g28710 (Rice Ensembl Gene) | |
| CRL1 | GeneProduct | LOC_Os03g05510 (Rice Ensembl Gene) | |
| CSN5 | GeneProduct | LOC_Os04g56070 (Rice Ensembl Gene) | |
| CTR1-like | GeneProduct | LOC_Os09g39320 (Rice Ensembl Gene) | Multitransmembrane protein |
| CYP450 | GeneProduct | LOC_Os10g08474 (Rice Ensembl Gene) | AP2 transcription factor |
| CYP450 | GeneProduct | LOC_Os09g10340 (Rice Ensembl Gene) | |
| Centromere protein | GeneProduct | LOC_Os03g20580 (Rice Ensembl Gene) | |
| Complex 1L | GeneProduct | LOC_Os06g50000 (Rice Ensembl Gene) | Assigned as Complex 1L by Nemeth D and Hanumappa M (10/21/2010) complex 1 family protein-like (LYR family) |
| CycA1-1 | GeneProduct | LOC_Os01g13260 (Rice Ensembl Gene) | |
| CycB1;1 | GeneProduct | LOC_Os01g59120 (Rice Ensembl Gene) | Seed Shattering |
| CycD2-2 | GeneProduct | LOC_Os07g42860 (Rice Ensembl Gene) | |
| Cyp2 | GeneProduct | LOC_Os02g02890 (Rice Ensembl Gene) | |
| DAD1 | GeneProduct | LOC_Os04g32550 (Rice Ensembl Gene) | Defender against cell death 1 |
| DAHPS1 | GeneProduct | LOC_Os03g27230 (Rice Ensembl Gene) | 3-deoxy-D-arabino heptulosonate-7-phosphate synthase 1 |
| DEK1 | GeneProduct | LOC_Os02g48000 (Rice Ensembl Gene) | |
| DEP | GeneProduct | LOC_Os11g29370 (Rice Ensembl Gene) | Haloacid dehalogenase-like hydrolase family protein |
| DIP1 | GeneProduct | LOC_Os05g34070 (Rice Ensembl Gene) | |
| DMAS1 | GeneProduct | LOC_Os03g13390 (Rice Ensembl Gene) | Deoxymugineic acid synthase1 |
| DOF ZF | GeneProduct | LOC_Os02g49440 (Rice Ensembl Gene) | |
| DPE1 | GeneProduct | LOC_Os07g43390 (Rice Ensembl Gene) | |
| DPE2 | GeneProduct | LOC_Os07g46790 (Rice Ensembl Gene) | Also called ALK |
| DPK4 | GeneProduct | LOC_Os06g45300 (Rice Ensembl Gene) | Ser/thr/tyr kinase |
| DREB1B | GeneProduct | LOC_Os09g35010 (Rice Ensembl Gene) | |
| DUF151 | GeneProduct | LOC_Os01g50622 (Rice Ensembl Gene) | |
| DUF584 | GeneProduct | LOC_Os05g45450 (Rice Ensembl Gene) | |
| DUF630 | GeneProduct | LOC_Os10g41310 (Rice Ensembl Gene) | Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
| Delta-COP | GeneProduct | LOC_Os01g61710 (Rice Ensembl Gene) | Delta coatamer |
| Disease resistance-like | GeneProduct | LOC_Os12g40490 (Rice Ensembl Gene) | LIM domain-containing protein, putative, expressed |
| Du1 | GeneProduct | LOC_Os10g35550 (Rice Ensembl Gene) | dull endosperm-1 |
| Dynamin | GeneProduct | LOC_Os06g13820 (Rice Ensembl Gene) | |
| E3-Ubi Ligase | GeneProduct | LOC_Os05g47780 (Rice Ensembl Gene) | |
| EBP89 | GeneProduct | LOC_Os03g08460 (Rice Ensembl Gene) | Also called EREBP1 |
| EF-1-d1 | GeneProduct | LOC_Os07g42300 (Rice Ensembl Gene) | EF-1B beta 1, EF-1-beta |
| EF-1-g3 | GeneProduct | LOC_Os06g37440 (Rice Ensembl Gene) | eEF-1B gamma 3 |
| EF-1-g | GeneProduct | LOC_Os02g12800 (Rice Ensembl Gene) | eEF-1G |
| EIL1 | GeneProduct | LOC_Os03g20780 (Rice Ensembl Gene) | |
| ENOD93-1 | GeneProduct | LOC_Os06g05010 (Rice Ensembl Gene) | |
| ERG3 | GeneProduct | LOC_Os04g44870 (Rice Ensembl Gene) | RPP16 |
| EXPB2 | GeneProduct | LOC_Os10g40710 (Rice Ensembl Gene) | |
| EXPB4 | GeneProduct | LOC_Os10g40730 (Rice Ensembl Gene) | Beta-expansin-4 |
| FBK21 | GeneProduct | LOC_Os10g21930 (Rice Ensembl Gene) | F-box domain and kelch repeat containing protein |
| FBL60 | GeneProduct | LOC_Os12g33230 (Rice Ensembl Gene) | Leucine rich repeat |
| FBO10 | GeneProduct | LOC_Os11g34460 (Rice Ensembl Gene) | Adagio-like protein 3 Cytochrome P450 |
| FDH | GeneProduct | LOC_Os02g57040 (Rice Ensembl Gene) | Alcohol dehydrogenase class 3; Also called FALDH, GSH-FDH (Glutathione-dependent formaldehyde dehydrogenase) |
| FERTILLIN | GeneProduct | LOC_Os06g01650 (Rice Ensembl Gene) | |
| Fibrillin | GeneProduct | LOC_Os09g04790 (Rice Ensembl Gene) | |
| Flavin containing monooxygenase 3-like | GeneProduct | LOC_Os09g37620 (Rice Ensembl Gene) | Serine/threonine protein kinase |
| Flavin-containing monooxygenase | GeneProduct | LOC_Os01g15540 (Rice Ensembl Gene) | |
| Fructose-6-phosphate 1-phosphotransferase | GeneProduct | LOC_Os08g25720 (Rice Ensembl Gene) | |
| GABA permease | GeneProduct | LOC_Os01g71720 (Rice Ensembl Gene) | Amino acid/polyamine transporter |
| GAMYB | GeneProduct | LOC_Os01g59660 (Rice Ensembl Gene) | regulates GA induction of Amy2A |
| GB2 | GeneProduct | LOC_Os03g57960 (Rice Ensembl Gene) | Globulin 2 |
| GBSSII | GeneProduct | LOC_Os07g22930 (Rice Ensembl Gene) | Also called ALK |
| GDSL-like Lipase | GeneProduct | LOC_Os10g05088 (Rice Ensembl Gene) | SGNH_plant_lipase |
| GF14-e | GeneProduct | LOC_Os02g36974 (Rice Ensembl Gene) | |
| GF14A | GeneProduct | LOC_Os08g37490 (Rice Ensembl Gene) | WIN2, WIP2 |
| GF14F | GeneProduct | LOC_Os03g50290 (Rice Ensembl Gene) | G-box factor 14-3-3 f |
| GF14b | GeneProduct | LOC_Os04g38870 (Rice Ensembl Gene) | |
| GF14c | GeneProduct | LOC_Os08g33370 (Rice Ensembl Gene) | |
| GLN1-1 | GeneProduct | LOC_Os02g50240 (Rice Ensembl Gene) | Glutamine synthetase cytosolic isozyme 1-1, also called RGS28 and GS1;1 |
| GLUB4 | GeneProduct | LOC_Os02g16830 (Rice Ensembl Gene) | |
| GP-alpha-1 | GeneProduct | LOC_Os05g26890 (Rice Ensembl Gene) | G-alpha protein also called GPA1/D1/GA1 |
| GPT-A | GeneProduct | LOC_Os05g07670 (Rice Ensembl Gene) | Assigned as GPT-A by Nemeth D and Hanumappa M (10/21/2010) |
| GPT1 | GeneProduct | LOC_Os08g08840 (Rice Ensembl Gene) | |
| GPT2-3 | GeneProduct | LOC_Os07g33910 (Rice Ensembl Gene) | |
| GPT2-B | GeneProduct | LOC_Os01g07310 (Rice Ensembl Gene) | Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) |
| GS3 | GeneProduct | C6L686 (Rice Ensembl Gene) | Grain Size 3 QTL
AB488612–AB48866/ BAH89242 |
| GTP cyclohydrolase | GeneProduct | LOC_Os05g38570 (Rice Ensembl Gene) | GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase |
| GW2 | GeneProduct | LOC_Os02g14720 (Rice Ensembl Gene) | encodes a RING protein with E3 ubiquitin ligase activity |
| GW5 | GeneProduct | B3IXB4 (Rice Ensembl Gene) | Grain Width 5 QTL |
| Gal1 | GeneProduct | LOC_Os10g35110 (Rice Ensembl Gene) | |
| Ghd7 | GeneProduct | LOC_Os07g15770 (Rice Ensembl Gene) | yield potential |
| GluA-1 | GeneProduct | LOC_Os01g55690 (Rice Ensembl Gene) | |
| GluA-2 | GeneProduct | LOC_Os10g26060 (Rice Ensembl Gene) | |
| GluA-3 | GeneProduct | LOC_Os03g31360 (Rice Ensembl Gene) | |
| GluB-1A | GeneProduct | LOC_Os02g15169 (Rice Ensembl Gene) | UniProt ID: P14323 |
| GluC | GeneProduct | LOC_Os02g15090 (Rice Ensembl Gene) | |
| GlyH | GeneProduct | LOC_Os11g27400 (Rice Ensembl Gene) | Chitinase |
| HAD-like | GeneProduct | LOC_Os03g16670 (Rice Ensembl Gene) | |
| HDS1 | GeneProduct | LOC_Os02g39160 (Rice Ensembl Gene) | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1 |
| HMG1 | GeneProduct | LOC_Os06g51220 (Rice Ensembl Gene) | |
| HOX 22 | GeneProduct | LOC_Os04g45810 (Rice Ensembl Gene) | In Cooper et al. 2003 protein sequence provided matches HOX 22, however it was named HOX6 (AF145730) |
| HOX6 | GeneProduct | LOC_Os09g35910 (Rice Ensembl Gene) | Cooper et al. 2003 called this leucine zipper and misnamed HOX 22 as HOX 6 (22834) |
| HRGP | GeneProduct | LOC_Os03g13560 (Rice Ensembl Gene) | Hydroxyproline-rich glycoprotein family protein-UniPret ID |
| HSP40 | GeneProduct | LOC_Os03g44620 (Rice Ensembl Gene) | |
| HSP70 | GeneProduct | LOC_Os12g14070 (Rice Ensembl Gene) | |
| HSP90 | GeneProduct | LOC_Os09g30418 (Rice Ensembl Gene) | Also called HSP81-2 |
| Hydrolase | GeneProduct | LOC_Os02g19650 (Rice Ensembl Gene) | Iron/ascorbate oxidoreductases |
| IAA amidohydrolase | GeneProduct | LOC_Os03g62060 (Rice Ensembl Gene) | |
| IAA1 | GeneProduct | LOC_Os01g08320 (Rice Ensembl Gene) | |
| IAA4 | GeneProduct | LOC_Os01g18360 (Rice Ensembl Gene) | |
| IAA9 | GeneProduct | LOC_Os02g56120 (Rice Ensembl Gene) | |
| IDEF1 | GeneProduct | LOC_Os08g01090 (Rice Ensembl Gene) | IDE-binding factor 2 |
| IDEF2 | GeneProduct | LOC_Os05g35170 (Rice Ensembl Gene) | IDE-binding factor 2 |
| IDI2 | GeneProduct | LOC_Os11g11050 (Rice Ensembl Gene) | Initiation factor 2 subunit family protein |
| IDI4 | GeneProduct | LOC_Os09g28050 (Rice Ensembl Gene) | asparate aminotransferase |
| IDS1/ MT4A | GeneProduct | LOC_Os12g38270 (Rice Ensembl Gene) | |
| INV2 | GeneProduct | LOC_Os01g22900 (Rice Ensembl Gene) | Neutral/alkaline invertase 2 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
| INV3 | GeneProduct | LOC_Os02g32730 (Rice Ensembl Gene) | Neutral/alkaline invertase 3 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
| IRO2 | GeneProduct | LOC_Os01g72370 (Rice Ensembl Gene) | basic/helix-loop-helix 56 |
| IRT1 | GeneProduct | LOC_Os03g46470 (Rice Ensembl Gene) | |
| ISA1 | GeneProduct | LOC_Os08g40930 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| ISA2 | GeneProduct | LOC_Os05g32710 (Rice Ensembl Gene) | |
| ISA3 | GeneProduct | LOC_Os09g29404 (Rice Ensembl Gene) | |
| Importin alpha-1a | GeneProduct | LOC_Os01g14950 (Rice Ensembl Gene) | NLS RECEPTOR |
| Integrase | GeneProduct | LOC_Os11g11694 (Rice Ensembl Gene) | |
| Isocitrate lyase | GeneProduct | LOC_Os07g34520 (Rice Ensembl Gene) | |
| JA cmtr | GeneProduct | LOC_Os06g22440 (Rice Ensembl Gene) | Putative S-adenosyl-L-methionine Subtilisin N-terminal Region |
| Jasmonate-induced protein | GeneProduct | LOC_Os12g09700 (Rice Ensembl Gene) | Histone H3 (Lys9) methyltransferase |
| KOB1 | GeneProduct | LOC_Os02g57240 (Rice Ensembl Gene) | Probable voltage-gated potassium channel subunit beta |
| KRP3 | GeneProduct | LOC_Os11g40030 (Rice Ensembl Gene) | |
| Keto acyl CoA thiolase | GeneProduct | LOC_Os02g57260 (Rice Ensembl Gene) | |
| Kinesin | GeneProduct | LOC_Os03g43100 (Rice Ensembl Gene) | |
| LEA 14-A | GeneProduct | LOC_Os05g50710 (Rice Ensembl Gene) | |
| LOC_Os01g12080 | GeneProduct | LOC_Os01g12080 (Rice Ensembl Gene) | |
| LOC_Os01g14110 | GeneProduct | LOC_Os01g14110 (Rice Ensembl Gene) | Assigned as bHLH-tf by Nemeth D and Hanumappa M (10/21/2010) |
| LOC_Os01g62740 | GeneProduct | LOC_Os01g62740 (Rice Ensembl Gene) | |
| LOC_Os02g08530 | GeneProduct | LOC_Os02g08530 (Rice Ensembl Gene) | Protein Kinase-UniProt ID |
| LOC_Os03g03860 | GeneProduct | LOC_Os03g03860 (Rice Ensembl Gene) | Unknown-UniProt ID |
| LOC_Os03g07360 | GeneProduct | LOC_Os03g07360 (Rice Ensembl Gene) | |
| LOC_Os03g50390 | GeneProduct | LOC_Os03g50390 (Rice Ensembl Gene) | Protein Kinase-UniProt ID |
| LOC_Os03g55130 | GeneProduct | LOC_Os03g55130 (Rice Ensembl Gene) | |
| LOC_Os03g56940 | GeneProduct | LOC_Os03g56940 (Rice Ensembl Gene) | |
| LOC_Os04g41910 | GeneProduct | LOC_Os04g41910 (Rice Ensembl Gene) | |
| LOC_Os04g53350 | GeneProduct | LOC_Os04g53350 (Rice Ensembl Gene) | Cooper 31122 ID |
| LOC_Os04g57020 | GeneProduct | LOC_Os04g57020 (Rice Ensembl Gene) | |
| LOC_Os05g06330 | GeneProduct | LOC_Os05g06330 (Rice Ensembl Gene) | |
| LOC_Os05g50190 | GeneProduct | LOC_Os05g50190 (Rice Ensembl Gene) | Protein Kinase-UniProt ID |
| LOC_Os06g14190 | GeneProduct | LOC_Os06g14190 (Rice Ensembl Gene) | |
| LOC_Os06g21400 | GeneProduct | LOC_Os06g21400 (Rice Ensembl Gene) | |
| LOC_Os06g39906 | GeneProduct | LOC_Os06g39906 (Rice Ensembl Gene) | |
| LOC_Os08g04580 | GeneProduct | LOC_Os08g04580 (Rice Ensembl Gene) | Thioredoxin |
| LOC_Os09g38090 | GeneProduct | LOC_Os09g38090 (Rice Ensembl Gene) | |
| LOC_Os10g30450 | GeneProduct | LOC_Os10g30450 (Rice Ensembl Gene) | Unknown-UniProt ID |
| LOC_Os10g40260 | GeneProduct | LOC_Os10g40260 (Rice Ensembl Gene) | |
| LOC_Os12g37570 | GeneProduct | LOC_Os12g37570 (Rice Ensembl Gene) | Protein Kinase-UniProt ID |
| LPLA | GeneProduct | LOC_Os08g33810 (Rice Ensembl Gene) | |
| LTPL109 | GeneProduct | LOC_Os07g37385 (Rice Ensembl Gene) | Extensin_2 |
| Lea3 | GeneProduct | LOC_Os05g46480 (Rice Ensembl Gene) | Interaction with TRAB1 and VP1 by orthology to H vulgare ABA related |
| Luc7-like 2 | GeneProduct | LOC_Os03g62640 (Rice Ensembl Gene) | Sarcoplasmic reticulum |
| MADS 13 | GeneProduct | LOC_Os12g10540 (Rice Ensembl Gene) | Also called MAF1 |
| MADS 14 | GeneProduct | LOC_Os03g54160 (Rice Ensembl Gene) | Also called AGL10, RAP1B |
| MADS 15 | GeneProduct | LOC_Os07g01820 (Rice Ensembl Gene) | Also called RAP1A |
| MADS 16 | GeneProduct | LOC_Os06g49840 (Rice Ensembl Gene) | |
| MADS 18 | GeneProduct | LOC_Os07g41370 (Rice Ensembl Gene) | Also called MADS 28 |
| MADS 1 | GeneProduct | LOC_Os03g11614 (Rice Ensembl Gene) | Also called LHS1 |
| MADS 22 | GeneProduct | LOC_Os02g52340 (Rice Ensembl Gene) | Also called RMD1 |
| MADS 2 | GeneProduct | LOC_Os01g66030 (Rice Ensembl Gene) | |
| MADS 3 | GeneProduct | LOC_Os01g10504 (Rice Ensembl Gene) | Also called RAG |
| MADS 47 | GeneProduct | LOC_Os03g08754 (Rice Ensembl Gene) | Also called MDP |
| MADS 56 | GeneProduct | LOC_Os10g39130 (Rice Ensembl Gene) | |
| MADS 57 | GeneProduct | LOC_Os02g49840 (Rice Ensembl Gene) | |
| MADS 5 | GeneProduct | LOC_Os06g06750 (Rice Ensembl Gene) | |
| MADS 6 | GeneProduct | LOC_Os02g45770 (Rice Ensembl Gene) | Also called MFO1 |
| MADS 8 | GeneProduct | LOC_Os09g32948 (Rice Ensembl Gene) | Also called MADS 24 |
| MADS-box IL | GeneProduct | LOC_Os02g54080 (Rice Ensembl Gene) | |
| MADS17 | GeneProduct | LOC_Os04g49150 (Rice Ensembl Gene) | Also called NMADS3 and RMADS213 |
| MADS7/45 | GeneProduct | LOC_Os08g41950 (Rice Ensembl Gene) | also called MADS 45, AGL6, M79 |
| MAPK2 | GeneProduct | LOC_Os02g05480 (Rice Ensembl Gene) | UniProt:MAPK2, BIMK1, MAP3, MAPK5, MPK3, MSRMK2 |
| MCM2 | GeneProduct | LOC_Os11g29380 (Rice Ensembl Gene) | |
| MLA10 | GeneProduct | LOC_Os11g16470 (Rice Ensembl Gene) | Ankyrin repeat |
| MPK5 | GeneProduct | LOC_Os03g17700 (Rice Ensembl Gene) | UniProt:MPK3, BIMK1, MAP3, MAPK2, MPK5 |
| MT2b | GeneProduct | LOC_Os05g02070 (Rice Ensembl Gene) | |
| MTN | GeneProduct | LOC_Os06g02220 (Rice Ensembl Gene) | Methylthioadenosine/S-adenosyl homocysteine nucleosidase |
| Mal d 1-AP | GeneProduct | LOC_Os01g56470 (Rice Ensembl Gene) | |
| Male sterility protein | GeneProduct | LOC_Os05g43040 (Rice Ensembl Gene) | |
| Mitrochondrial carrier | GeneProduct | LOC_Os03g11510 (Rice Ensembl Gene) | |
| Myosin like | GeneProduct | LOC_Os03g16120 (Rice Ensembl Gene) | |
| Myosin like | GeneProduct | LOC_Os05g02820 (Rice Ensembl Gene) | |
| NAAT1 | GeneProduct | LOC_Os02g20360 (Rice Ensembl Gene) | nicotianamine aminotransferase |
| NAC 10 | GeneProduct | LOC_Os11g03300 (Rice Ensembl Gene) | |
| NAC075 | GeneProduct | LOC_Os01g09550 (Rice Ensembl Gene) | |
| NAC2 | GeneProduct | LOC_Os02g57650 (Rice Ensembl Gene) | |
| NAC4 | GeneProduct | LOC_Os01g60020 (Rice Ensembl Gene) | |
| NAC5 | GeneProduct | LOC_Os11g08210 (Rice Ensembl Gene) | ABA related |
| NADPH G-3-P dh | GeneProduct | LOC_Os08g34210 (Rice Ensembl Gene) | |
| NAS1 | GeneProduct | LOC_Os03g19427 (Rice Ensembl Gene) | NA synthase gene 1 |
| NAS2 | GeneProduct | LOC_Os03g19420 (Rice Ensembl Gene) | NA synthase gene 2 |
| NB-ARC domain protein | GeneProduct | LOC_Os11g34880 (Rice Ensembl Gene) | Jacalin |
| OSE2-like | GeneProduct | LOC_Os05g36160 (Rice Ensembl Gene) | |
| OSE2 | GeneProduct | LOC_Os01g64730 (Rice Ensembl Gene) | bZIP transcription factor domain containing protein |
| Oligopeptide transporter 3 | GeneProduct | LOC_Os03g54000 (Rice Ensembl Gene) | Isp4-like |
| Oryzain alpha Protease | GeneProduct | LOC_Os04g55650 (Rice Ensembl Gene) | |
| Oryzain gamma Protease | GeneProduct | LOC_Os09g27030 (Rice Ensembl Gene) | |
| OsAK | GeneProduct | LOC_Os02g41590 (Rice Ensembl Gene) | Adenosine kinase |
| OsCCP | GeneProduct | LOC_Os12g08760 (Rice Ensembl Gene) | Assigned as OsCCP by Nemeth D and Hanumappa M (10/21/2010) carboxyvinyl-carboxyphosphonate phosphorylmutase |
| OsEM | GeneProduct | LOC_Os05g28210 (Rice Ensembl Gene) | |
| OsFBX237 | GeneProduct | LOC_Os07g35050 (Rice Ensembl Gene) | Cdc2-related protein kinase |
| OsIAA13 | GeneProduct | LOC_Os03g53150 (Rice Ensembl Gene) | |
| OsLKR | GeneProduct | LOC_Os02g54254 (Rice Ensembl Gene) | |
| OsPRP1 | GeneProduct | LOC_Os10g05970 (Rice Ensembl Gene) | Proline rich protein |
| PBZ1 | GeneProduct | LOC_Os12g36880 (Rice Ensembl Gene) | |
| PCNA | GeneProduct | LOC_Os02g56130 (Rice Ensembl Gene) | Proliferating cell nuclear antigen expressed strongly in the shoot apical meristem |
| PGI-a | GeneProduct | LOC_Os09g29070 (Rice Ensembl Gene) | |
| PGI-b | GeneProduct | LOC_Os06g14510 (Rice Ensembl Gene) | |
| PHD Zn-finger | GeneProduct | LOC_Os11g12650 (Rice Ensembl Gene) | |
| PHD zf | GeneProduct | LOC_Os03g04980 (Rice Ensembl Gene) | |
| PHOH | GeneProduct | LOC_Os01g63270 (Rice Ensembl Gene) | Also called ALK |
| PHOL | GeneProduct | LOC_Os03g55090 (Rice Ensembl Gene) | |
| PHT4;3 | GeneProduct | LOC_Os01g63290 (Rice Ensembl Gene) | Na+ dep inorg phosphate cotransporter |
| PIP5K | GeneProduct | LOC_Os02g57660 (Rice Ensembl Gene) | Putative phosphatidylinositol-4-phosphate 5-kinase |
| PP2A-3 | GeneProduct | LOC_Os02g12580 (Rice Ensembl Gene) | |
| PP2A-B | GeneProduct | LOC_Os05g40350 (Rice Ensembl Gene) | |
| PP2A1 | GeneProduct | LOC_Os06g37660 (Rice Ensembl Gene) | |
| PP2A2 | GeneProduct | LOC_Os03g59060 (Rice Ensembl Gene) | |
| PPDK1 | GeneProduct | LOC_Os05g33570 (Rice Ensembl Gene) | CPDK1, PPDKB |
| PPDKA | GeneProduct | LOC_Os03g31750 (Rice Ensembl Gene) | Assigned as GPT-B by Nemeth D and Hanumappa M (10/21/2010) |
| PPDKB | GeneProduct | LOC_Os05g33570 (Rice Ensembl Gene) | Involved in grain filling |
| PPR bZIP | GeneProduct | LOC_Os05g40320 (Rice Ensembl Gene) | Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
| PPROL 14 E | GeneProduct | LOC_Os05g26377 (Rice Ensembl Gene) | 13 kDa Prolamin, also called PPROL 14, PPROL 4A, PPROL 7, PG5a, PROLM 8, PROLM 9, UniProt ID: Q95737 |
| PROLM 24 | GeneProduct | LOC_Os05g31070 (Rice Ensembl Gene) | 16 kDa Prolamin |
| PROLM26 | GeneProduct | LOC_Os07g10580 (Rice Ensembl Gene) | Prolamin precursor, also called RP5 |
| PROLM28 | GeneProduct | LOC_Os12g16890 (Rice Ensembl Gene) | Prolamin precursor, protein also called PPROL 17 |
| PRP1 | GeneProduct | LOC_Os05g13940 (Rice Ensembl Gene) | |
| PSI-D | GeneProduct | LOC_Os08g44680 (Rice Ensembl Gene) | |
| PSII-OEP33 | GeneProduct | LOC_Os01g31690 (Rice Ensembl Gene) | No symbol in gramene so OEP33 was assigned. 33kDa oxygen evolving protein of photosystem II |
| PSRR-L | GeneProduct | LOC_Os07g25710 (Rice Ensembl Gene) | Phosphate starvation response regulator |
| PUL | GeneProduct | LOC_Os04g08270 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| PUP2 | GeneProduct | LOC_Os06g46740 (Rice Ensembl Gene) | |
| Pectinesterase | GeneProduct | LOC_Os07g02810 (Rice Ensembl Gene) | |
| Permease | GeneProduct | LOC_Os07g04180 (Rice Ensembl Gene) | |
| Phosphoglucomutase | GeneProduct | LOC_Os05g48200 (Rice Ensembl Gene) | |
| Phospholipase C | GeneProduct | LOC_Os07g49330 (Rice Ensembl Gene) | |
| Phosphotyrosine | GeneProduct | LOC_Os08g44320 (Rice Ensembl Gene) | |
| Photosystem I RC subunit | GeneProduct | LOC_Os07g05480 (Rice Ensembl Gene) | |
| Phragmoplast kinase | GeneProduct | LOC_Os04g28260 (Rice Ensembl Gene) | |
| Pit | GeneProduct | LOC_Os01g05620 (Rice Ensembl Gene) | |
| Plasma membrane ATPase | GeneProduct | LOC_Os04g56160 (Rice Ensembl Gene) | |
| Pr1b | GeneProduct | LOC_Os01g28450 (Rice Ensembl Gene) | |
| Pto kinase Interactor 1 | GeneProduct | LOC_Os05g04520 (Rice Ensembl Gene) | |
| Pumilio | GeneProduct | LOC_Os12g31000 (Rice Ensembl Gene) | Leucine rich repeat |
| Pyrrolidone-Carboxylpeptidase | GeneProduct | LOC_Os03g25270 (Rice Ensembl Gene) | |
| RACK1A | GeneProduct | LOC_Os01g49290 (Rice Ensembl Gene) | Also called GPB-LR/ RWD |
| RAD6 | GeneProduct | LOC_Os03g57790 (Rice Ensembl Gene) | transcripts of both OsRad6 and OsSgt1 were found to be strongly expressed in the proliferating tissues such SAM |
| RAG-1 | GeneProduct | LOC_Os09g16260 (Rice Ensembl Gene) | RISBZ1 + RPBF activated the RAG-1 promoter greater than RPBF alone, though RISBZ1 did not independently affect promoter activity |
| RALF24 | GeneProduct | LOC_Os11g26340 (Rice Ensembl Gene) | Rapid ALkalinization Factor |
| RA | GeneProduct | LOC_Os04g47080 (Rice Ensembl Gene) | seed coat color, endosperm color |
| RAR1 | GeneProduct | LOC_Os02g33180 (Rice Ensembl Gene) | |
| RAV1-like | GeneProduct | LOC_Os01g49830 (Rice Ensembl Gene) | |
| RB | GeneProduct | LOC_Os01g39580 (Rice Ensembl Gene) | seed coat color, endosperm color |
| RCAA1 | GeneProduct | LOC_Os11g47970 (Rice Ensembl Gene) | RuBisCO activase large isoform |
| REB | GeneProduct | LOC_Os03g58250 (Rice Ensembl Gene) | Symbol assigned by Nemeth D and Hanumappa M (08/19/2010) |
| RIC1 | GeneProduct | LOC_Os01g37800 (Rice Ensembl Gene) | |
| RIR 1b | GeneProduct | LOC_Os05g48260 (Rice Ensembl Gene) | |
| RISBZ1 | GeneProduct | LOC_Os07g08420 (Rice Ensembl Gene) | Functionaly redundant and compensatory expression between RISBZI and RPBF. Double Knock-Down mutant (KD-RISBZ1/KD-RPBF) caused most expression change in OsLKR/SDH |
| RPBF | GeneProduct | LOC_Os02g15350 (Rice Ensembl Gene) | Functionaly redundant and compensatory expression between RISBZI and RPBF except for OsLKR/SDH double KD mutant (KD-RISBZ1/KD-RPBF) caused most expression change |
| RPK-TMK1 precursor | GeneProduct | LOC_Os04g58910 (Rice Ensembl Gene) | receptor protein kinase TMK1 precursor |
| RPS20 | GeneProduct | LOC_Os06g04290 (Rice Ensembl Gene) | P35686 |
| RSR1 | GeneProduct | LOC_Os01g40280 (Rice Ensembl Gene) | |
| RUBQ1 | GeneProduct | LOC_Os02g06640 (Rice Ensembl Gene) | Also called Polyubiquitin 6 Also given LOC_Os05g42424 which is not complete |
| Rab21 | GeneProduct | LOC_Os11g26790 (Rice Ensembl Gene) | ABA related water stress + cold stress |
| Rac | GeneProduct | LOC_Os01g12900 (Rice Ensembl Gene) | |
| Rcd1-L | GeneProduct | LOC_Os04g52340 (Rice Ensembl Gene) | Also given LOC_Os07g37790 and LOC_Os03g57130 |
| Retrotransposon | GeneProduct | LOC_Os12g24050 (Rice Ensembl Gene) | Sulfotransferase |
| Ring Finger | GeneProduct | LOC_Os01g01390 (Rice Ensembl Gene) | |
| Ring ZF | GeneProduct | LOC_Os04g48050 (Rice Ensembl Gene) | |
| S-REP | GeneProduct | LOC_Os04g47990 (Rice Ensembl Gene) | |
| SAL1 | GeneProduct | LOC_Os06g43590 (Rice Ensembl Gene) | |
| SAM cmtr | GeneProduct | LOC_Os02g06770 (Rice Ensembl Gene) | |
| SAP11 | GeneProduct | LOC_Os08g39450 (Rice Ensembl Gene) | Also called ZFP60 |
| SBEIIa | GeneProduct | LOC_Os04g33460 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| SBEIIb | GeneProduct | LOC_Os02g32660 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| SCP40 | GeneProduct | LOC_Os07g46350 (Rice Ensembl Gene) | Serine carboxypesidase |
| SCR-like | GeneProduct | LOC_Os02g45760 (Rice Ensembl Gene) | Scarecrow transcriptional regulator-like protein |
| SET domain protein | GeneProduct | LOC_Os02g40770 (Rice Ensembl Gene) | histone-lysine N-methyltransferase |
| SGT1 | GeneProduct | LOC_Os01g43540 (Rice Ensembl Gene) | Responds to salicylic acid in chemically induced biotic response |
| SIP2 | GeneProduct | LOC_Os10g28350 (Rice Ensembl Gene) | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 Ethylene induced |
| SNAC1 | GeneProduct | LOC_Os03g60080 (Rice Ensembl Gene) | |
| SNAC2 | GeneProduct | LOC_Os01g66120 (Rice Ensembl Gene) | ABA-related |
| SPK | GeneProduct | LOC_Os10g39420 (Rice Ensembl Gene) | required for storage product accumulation during seed development seed-specific protein kinase |
| SPP1 | GeneProduct | LOC_Os01g27880 (Rice Ensembl Gene) | sucrose-phosphatase 1 |
| SPP2 | GeneProduct | LOC_Os02g05030 (Rice Ensembl Gene) | sucrose-phosphatase 2 |
| SPS-Hv | GeneProduct | LOC_Os02g09170 (Rice Ensembl Gene) | sucrose-phosphate synthase-Hordeum vulgare= named after table III on Yamakawa et al. (2007) |
| SPS-O spp | GeneProduct | LOC_Os08g20660 (Rice Ensembl Gene) | sucrose-phosphate synthase-Oncidium spp= named after table III on Yamakawa et al. (2007) |
| SPS-So | GeneProduct | LOC_Os06g43630 (Rice Ensembl Gene) | sucrose-phosphate synthase-Saccharum officinarum= named after table III on Yamakawa et al. (2007) |
| SPS-Zm | GeneProduct | LOC_Os06g42824 (Rice Ensembl Gene) | sucrose-phosphate synthase-Zea mays= named after table III on Yamakawa et al. (2007) |
| SSA1 | GeneProduct | LOC_Os05g41970 (Rice Ensembl Gene) | 26 kDa alpha globulin |
| SSA2 | GeneProduct | LOC_Os03g55730 (Rice Ensembl Gene) | 10 kDa prolamin precursor |
| SSII-2 | GeneProduct | LOC_Os02g51070 (Rice Ensembl Gene) | Also called ALK |
| SSII-3 | GeneProduct | LOC_Os06g12450 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| SSIIIa/ Flo5 | GeneProduct | LOC_Os08g09230 (Rice Ensembl Gene) | expression diminished during grain filling at high temperatures |
| SSIIIb | GeneProduct | LOC_Os04g53310 (Rice Ensembl Gene) | Also called ALK |
| SSIIc | GeneProduct | LOC_Os10g30156 (Rice Ensembl Gene) | Also called ALK |
| SSI | GeneProduct | LOC_Os06g06560 (Rice Ensembl Gene) | |
| SSIVa | GeneProduct | LOC_Os01g52250 (Rice Ensembl Gene) | Also called ALK |
| SSIVb | GeneProduct | LOC_Os05g45720 (Rice Ensembl Gene) | Also called ALK |
| SUS1 | GeneProduct | LOC_Os03g28330 (Rice Ensembl Gene) | Sucrose synthase 1 |
| SUS2 | GeneProduct | LOC_Os06g09450 (Rice Ensembl Gene) | Sucrose synthase 2 |
| SUS3 | GeneProduct | LOC_Os07g42490 (Rice Ensembl Gene) | Sucrose synthase 3 |
| SUT1 | GeneProduct | LOC_Os03g07480 (Rice Ensembl Gene) | |
| SUT2 | GeneProduct | LOC_Os12g44380 (Rice Ensembl Gene) | |
| SUT3 | GeneProduct | LOC_Os10g26470 (Rice Ensembl Gene) | |
| SUT4 | GeneProduct | LOC_Os02g58080 (Rice Ensembl Gene) | |
| SUT5 | GeneProduct | LOC_Os02g36700 (Rice Ensembl Gene) | |
| SWEET3a | GeneProduct | LOC_Os05g12320 (Rice Ensembl Gene) | |
| Sci2 | GeneProduct | LOC_Os01g42860 (Rice Ensembl Gene) | |
| Sdr4 | GeneProduct | LOC_Os07g39700 (Rice Ensembl Gene) | |
| Ser/thr PK | GeneProduct | LOC_Os02g43290 (Rice Ensembl Gene) | |
| Ser/thr PK | GeneProduct | LOC_Os06g04880 (Rice Ensembl Gene) | |
| Serine protease | GeneProduct | LOC_Os04g45910 (Rice Ensembl Gene) | Os04g0542900, |
| Shaggy kinase | GeneProduct | LOC_Os10g37740 (Rice Ensembl Gene) | |
| Smt1-1 | GeneProduct | LOC_Os07g10600 (Rice Ensembl Gene) | Cycloartenol-C24-methyltransferase |
| Stress-related protein | GeneProduct | LOC_Os07g47510 (Rice Ensembl Gene) | |
| SuSy4 | GeneProduct | LOC_Os03g22120 (Rice Ensembl Gene) | Sucrose synthase 4 |
| SuSy5 | GeneProduct | LOC_Os02g58480 (Rice Ensembl Gene) | Sucrose synthase 5 |
| SuSy6 | GeneProduct | LOC_Os04g24430 (Rice Ensembl Gene) | Sucrose synthase 6 |
| Sub9 | GeneProduct | LOC_Os01g58290 (Rice Ensembl Gene) | Amino acid transporters |
| TAP46 | GeneProduct | LOC_Os12g04290 (Rice Ensembl Gene) | |
| TATC | GeneProduct | LOC_Os01g31680 (Rice Ensembl Gene) | |
| THF1 | GeneProduct | LOC_Os07g37250 (Rice Ensembl Gene) | Inositol phosphatase |
| TLR31 | GeneProduct | LOC_Os02g53400 (Rice Ensembl Gene) | Translational repressor MPT5/PUF4 |
| TPR-PK | GeneProduct | LOC_Os03g61010 (Rice Ensembl Gene) | Putative protein kinase |
| TRAB1 | GeneProduct | LOC_Os08g36790 (Rice Ensembl Gene) | Interaction with Wsi18 and Lea3 by orthology to H vulgare bZIP transcription factor TRAB1, ABA RESPONSIVE ELEMENT 1=ABA1 |
| TRNA endonuclease | GeneProduct | LOC_Os11g38930 (Rice Ensembl Gene) | catalytic C-terminal domain containing protein |
| TUBB3 | GeneProduct | LOC_Os06g46000 (Rice Ensembl Gene) | Tubulin beta-3 chain |
| Terpene cyclases | GeneProduct | LOC_Os04g27190 (Rice Ensembl Gene) | |
| Thioredoxin-like | GeneProduct | LOC_Os04g57310 (Rice Ensembl Gene) | thiol-disulphide oxidoreductase DCC |
| TyrK | GeneProduct | LOC_Os11g15340 (Rice Ensembl Gene) | SAM dependent carboxyl methyltransferase |
| U2 snRNP | GeneProduct | LOC_Os11g41820 (Rice Ensembl Gene) | |
| UDP-glucosyl transferase | GeneProduct | LOC_Os04g12960 (Rice Ensembl Gene) | |
| UGP | GeneProduct | LOC_Os02g02550 (Rice Ensembl Gene) | |
| UGP1 | GeneProduct | LOC_Os09g38030 (Rice Ensembl Gene) | |
| UGP2 | GeneProduct | LOC_Os02g02560 (Rice Ensembl Gene) | |
| UOS1 | GeneProduct | LOC_Os06g49120 (Rice Ensembl Gene) | NAD(P)-binding/Rossman fold |
| USP1 | GeneProduct | LOC_Os07g47620 (Rice Ensembl Gene) | ETFP adenine nucleotide |
| Ubi | GeneProduct | LOC_Os09g31031 (Rice Ensembl Gene) | |
| Ubiquitin proteinase | GeneProduct | LOC_Os02g43760 (Rice Ensembl Gene) | ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed |
| VDAC5 | GeneProduct | LOC_Os03g10510 (Rice Ensembl Gene) | |
| VIP1-like | GeneProduct | LOC_Os06g02240 (Rice Ensembl Gene) | |
| VP1 | GeneProduct | LOC_Os01g68370 (Rice Ensembl Gene) | Interaction with Wsi18 and Lea3 by orthology to H vulgare
ABA-related Seed dormancy Interaction with Wsi18 and Lea3 by orthology to H vulgare |
| VP2-like | GeneProduct | LOC_Os03g05750 (Rice Ensembl Gene) | |
| Vin 2 | GeneProduct | LOC_Os02g01590 (Rice Ensembl Gene) | |
| Vin1 | GeneProduct | LOC_Os04g45290 (Rice Ensembl Gene) | |
| WRKY 51 | GeneProduct | LOC_Os04g21950 (Rice Ensembl Gene) | ABA-inducible & GA-repressible WRKY 51 by itself also represses activation of Amy2A by GAMYB |
| WRKY 55 | GeneProduct | LOC_Os03g20550 (Rice Ensembl Gene) | |
| WRKY 71 | GeneProduct | LOC_Os02g08440 (Rice Ensembl Gene) | ABA-inducible & GA-repressible
Interaction between WRKY 51 and 71 enhances the binding affinity of WRKY71 to the Amy32b promoter WRKY 71 by itself also represses activation of Amy2A by GAMYB |
| Wsi18 | GeneProduct | LOC_Os01g50910 (Rice Ensembl Gene) | Interaction with TRAB1 and VP1 by orthology to H vulgare
ABA and GA induced water stress + cold stress member of the group 3 Lea family Wsi18 promoter is active in the whole grain |
| Wx1 | GeneProduct | LOC_Os06g04200 (Rice Ensembl Gene) | 30% less pre-mRNA in du1 mutant line
Granule-bound starch synthase expression diminished during grain filling at high temperatures |
| YSL15 | GeneProduct | LOC_Os02g43410 (Rice Ensembl Gene) | YELLOW STRIPE LIKE 15 |
| YSL2 | GeneProduct | LOC_Os02g43370 (Rice Ensembl Gene) | yellow stripe 1-like |
| ZF-like | GeneProduct | LOC_Os01g40990 (Rice Ensembl Gene) | |
| ZIP-1a | GeneProduct | LOC_Os12g13170 (Rice Ensembl Gene) | |
| ZOS1-15 | GeneProduct | LOC_Os01g62190 (Rice Ensembl Gene) | Salt-stress ABA related |
| b-1,3-Glucanase | GeneProduct | LOC_Os03g25790 (Rice Ensembl Gene) | |
| bHLH60 | GeneProduct | LOC_Os08g04390 (Rice Ensembl Gene) | Helix-loop-helix TF |
| bZIP | GeneProduct | LOC_Os11g06170 (Rice Ensembl Gene) | |
| beta-fructofuranosidase | GeneProduct | LOC_Os03g20020 (Rice Ensembl Gene) | Neutral/alkaline invertase 1 Assigned as NA-INV1 by Nemeth D and Hanumappa M (10/21/2010) |
| bhlh113 | GeneProduct | LOC_Os10g40740 (Rice Ensembl Gene) | basic/helix-loop-helix 113 |
| bip110 | GeneProduct | LOC_Os06g08530 (Rice Ensembl Gene) | Putative ubiquitin-specific protease 23, BRI1-KD interacting protein 110 |
| bip129 | GeneProduct | LOC_Os08g40790 (Rice Ensembl Gene) | |
| double-stranded beta-helix domain | GeneProduct | LOC_Os11g06370 (Rice Ensembl Gene) | |
| eif(iso)4g | GeneProduct | LOC_Os04g42140 (Rice Ensembl Gene) | |
| ferroportin1 | GeneProduct | LOC_Os06g36450 (Rice Ensembl Gene) | |
| flavanone 3-hydroxylase | GeneProduct | LOC_Os08g37456 (Rice Ensembl Gene) | 2-oxoglutarate (2OG) - Fe(II) oxygenase |
| grpA3 | GeneProduct | LOC_Os05g02780 (Rice Ensembl Gene) | |
| msrB-1 | GeneProduct | LOC_Os03g24600 (Rice Ensembl Gene) |
|
| phosphomannomutase | GeneProduct | LOC_Os06g28194 (Rice Ensembl Gene) | Soluble epoxide hydrolase |
| prx61 | GeneProduct | LOC_Os04g59190 (Rice Ensembl Gene) | Class III peroxidase 61 |
| psbC | GeneProduct | LOC_Os02g24632 (Rice Ensembl Gene) | |
| rbcL | GeneProduct | LOC_Os10g21268 (Rice Ensembl Gene) | |
| taxane 10-beta-hydroxylase | GeneProduct | LOC_Os07g33480 (Rice Ensembl Gene) | Glutamate synthase cytochrome P450 domain containing protein |
| vATP synthase C | GeneProduct | LOC_Os05g51530 (Rice Ensembl Gene) |
Annotated Interactions
No annotated interactions
