Cadmium and glutathione (Arabidopsis thaliana)

Revision as of 19:25, 21 October 2013 by Marijke Jozefczak (Talk | contribs)

Description

No description

View approved pathways at the new wikipathways.org.

Pathway Ontology : cellular detoxification pathway

Jozefczak M, Keunen E, Schat H, Bliek M, Hernández LE, Carleer R, Remans T, Bohler S, Vangronsveld J, Cuypers A; ''Differential response of Arabidopsis leavesand roots to cadmium: glutathione-related chelating capacity vs antioxidant capacity.''; Plant Physiol Biochem, 2014 PubMed Europe PMC Scholia

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Revision	Action	Time	User	Comment
107043	view	14:11, 17 September 2019	MaintBot	ChEBI identifier normalization
105897	view	11:36, 16 August 2019	Mkutmon	HMDB identifier normalization
82711	view	09:46, 23 October 2015	Egonw	Added the paper from which the figure was digitized to the reference list.
82710	view	09:39, 23 October 2015	Egonw	Fixed the identifier for NADP+ (the HMDB id for glutathion was used).
79443	view	06:51, 22 March 2015	Egonw	Removed Entrez Gene xrefs where gene names where used and of which the genes are given by another gene code and identifier too.
77262	view	01:04, 9 August 2014	AlexanderPico	one more shape sent to back
77261	view	01:03, 9 August 2014	AlexanderPico	Set bounding shapes behind datanodes
77260	view	00:56, 9 August 2014	AlexanderPico	Modified description
77206	view	16:14, 5 August 2014	Marijke Jozefczak	Modified description
77205	view	16:11, 5 August 2014	Marijke Jozefczak	Modified description
74481	view	11:29, 25 April 2014	Marijke Jozefczak	no legend
74132	view	05:54, 1 April 2014	Egonw	Removed a non-existing HMDB ID and cannot figure out based on the name 'DHA' what it should be.
74130	view	05:22, 1 April 2014	Egonw	Replaced an unknown HMDB identifier (not on their website) with the ChEBI one.
73612	view	20:35, 4 February 2014	Marijke Jozefczak	Modified title
73611	view	20:34, 4 February 2014	Marijke Jozefczak	PP
72205	view	11:49, 27 October 2013	Egonw	Ontology Term : 'cellular detoxification pathway' added !
71886	view	19:25, 21 October 2013	Marijke Jozefczak	New pathway

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Name	Type	Database reference
2 H2O	Metabolite	HMDB02111 (HMDB)
APX1	GeneProduct	AT1G07890 (Ensembl)
APX2	GeneProduct	AT3G09640 (Ensembl)
ATX1	GeneProduct	AT1G66240 (Ensembl)
AsA	Metabolite	HMDB00044 (HMDB)
CCH	GeneProduct	AT3G56240 (Ensembl)
CCS	GeneProduct	AT1G12520 (Ensembl)
CSD1	GeneProduct	AT1G08830 (Ensembl)
CSD2	GeneProduct	AT2G28190 (Ensembl)
CuZnSOD	Protein	AT1G08830 (Ensembl)
DHA	Metabolite	HMDB13004 (HMDB)
DHAR	Protein	GO:0045174 (GeneOntology)
FSD1	GeneProduct	AT4G25100 (Ensembl)
FeSOD	Protein	AT4G25100 (Ensembl)
GR1	GeneProduct	AT3G24170 (Ensembl)
GR2	GeneProduct	AT3G54660 (Ensembl)
GSH1	GeneProduct	828409 (Entrez Gene)
GSH2	GeneProduct	AT5G27380 (Ensembl)
GSH	Metabolite	HMDB00125 (HMDB)
GSSG	Metabolite	HMDB03337 (HMDB)
H2O2	Metabolite	HMDB03125 (HMDB)
MDHA	Metabolite	HMDB13004 (HMDB)
MDHAR	Protein	GO:0016656 (GeneOntology)
MSD1	GeneProduct	820263 (Entrez Gene)
MnSOD	GeneProduct	820263 (Entrez Gene)
NADP+	Metabolite	HMDB00125 (HMDB)
NADPH	Metabolite	HMDB00221 (HMDB)
PC	Metabolite	GO:0046938 (GeneOntology)
PCS1	GeneProduct	AT5G544070 (Ensembl)
cysteine	Metabolite	HMDB00574 (HMDB)
gamma-EC	Metabolite	HMDB01049 (HMDB)
glutamate	Metabolite	HMDB00148 (HMDB)
glycine	Metabolite	HMDB00123 (HMDB)
miR398a	GeneProduct	AT2G03445 (Ensembl)
miR398b/c	GeneProduct	AT5G14545 (Ensembl)