Glycolysis (Arabidopsis thaliana)

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1ChloroplastPPifructose 1,6-bisphosphate aldolaseglycerate 2-phosphatefructose 1,6-bisphosphatepyruvateglycerate 3-phosphatehexokinaseglucoseoxaloacetatephosphoglycerate mutasephosphoenolpyruvatemalic enzymeglucose 6-phosphatephosphopyruvate hydratasefructose 6-phosphatemalateglucose-6-phosphate isomeraseglyceraldehyde 3-phosphate dehydrogenaseNADHglycerate 1,3-bisphosphateNAD+phosphoenolpyruvate carboxylasephosphoglycerate kinaseHCO3-PPi-dependent phosphofructokinasepyruvate kinaseDihydroxyacetone phosphateglyceraldahyde-3-phosphatetriose phosphate isomeraseNADPHNADP+ATPADPmalate dehydrogenaseNAD+NADHATPADPATPADPATP-dependent phosphofructokinasePiATPADPPiH2OPiSucrose MetabolismStarch MetabolismCalvin CycleTCA Cycle(Krebs Cycle)Valine and IsoleucineBiosynthesisPiPiCysteine and MethionineBiosynthesisLysineBiosynthesisChloroplastMitochondrion


Description

No description

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Quality Tags

Ontology Terms

 

Bibliography

  1. Lincoln Taiz, Eduardo Zeiger; ''Plant Physiology''; Sinauer Associates, third edition, 2002
  2. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, Moore BD; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis.''; Planta, 2008 PubMed Europe PMC Scholia
  3. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, Moore BD; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis.''; Planta, 2008 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
125286view16:41, 31 January 2023LarsgwAdd ISBN to reference
115459view08:16, 21 February 2021EgonwMade four pathways clickable
105900view11:36, 16 August 2019MkutmonHMDB identifier normalization
78381view10:22, 7 January 2015MaintBotadded missing graphIds
76229view12:05, 19 June 2014SbohlerAll protein noder are now annotated with UNIPROT IDs. Information about protein isoforms was added. Subcellular location of hexokinase 2 was verified by litterature, since the information is stated wrongly in UNIPROT.
75324view13:31, 19 May 2014SbohlerAdded cell border, added RNAs for GAPC1, GAPC2, NADP-ME 1, 2 and 3.
73929view11:13, 4 March 2014AnweshaModified description
73928view11:08, 4 March 2014SbohlerModified description
73927view11:05, 4 March 2014AnweshaAdded metabolite identifiers
73926view11:03, 4 March 2014AnweshaAdded metabolite identifiers
73925view10:58, 4 March 2014AnweshaAdded pathway identifiers
73878view21:50, 26 February 2014MaintBotOntology Term : 'glycolysis pathway' added !
73680view08:28, 15 February 2014EgonwAdded a bunch of missing metabolite identifiers.
73621view11:19, 6 February 2014SbohlerPeriodical save, work in progress
73620view10:54, 6 February 2014SbohlerAdded organelle labels
73605view13:22, 4 February 2014AnweshaNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ADPMetabolite
ATP-dependent phosphofructokinaseProtein2.7.1.11 (Enzyme Nomenclature)
ATPMetaboliteHMDB00538 (HMDB)
Calvin CyclePathway
Cysteine and Methionine BiosynthesisPathway
Dihydroxyacetone phosphateMetaboliteHMDB01473 (HMDB)
H2OMetaboliteHMDB02111 (HMDB)
HCO3-Metabolite
Lysine BiosynthesisPathway
NAD+MetaboliteHMDB00902 (HMDB)
NADHMetaboliteHMDB01487 (HMDB)
NADP+MetaboliteHMDB00217 (HMDB)
NADPHMetaboliteHMDB00221 (HMDB)
PPiMetabolite
PPi-dependent phosphofructokinaseProtein2.7.1.90 (Enzyme Nomenclature)
PiMetabolite
Starch Metabolism Pathway
Sucrose Metabolism Pathway
TCA Cycle (Krebs Cycle)Pathway
Valine and Isoleucine BiosynthesisPathway
fructose 1,6-bisphosphate aldolaseProtein4.1.2.13 (Enzyme Nomenclature)
fructose 1,6-bisphosphateMetaboliteHMDB01058 (HMDB)
fructose 6-phosphateMetaboliteHMDB00124 (HMDB)
glucose 6-phosphateMetaboliteHMDB01401 (HMDB)
glucose-6-phosphate isomeraseProtein5.3.1.9 (Enzyme Nomenclature)
glucoseMetaboliteHMDB00122 (HMDB)
glyceraldahyde-3-phosphateMetabolite
glyceraldehyde 3-phosphate dehydrogenaseProtein1.2.1.12 (Enzyme Nomenclature)
glycerate 1,3-bisphosphateMetabolite
glycerate 2-phosphateMetabolite
glycerate 3-phosphateMetabolite
hexokinaseProtein2.7.1.1 (Enzyme Nomenclature)
malateMetabolite
malate dehydrogenaseProtein1.1.1.37 (Enzyme Nomenclature)
malic enzymeProteinQ9LYG3 (Uniprot-TrEMBL)
oxaloacetateMetabolite
phosphoenolpyruvateMetabolite
phosphoenolpyruvate carboxylaseProtein4.1.1.31 (Enzyme Nomenclature)
phosphoglycerate kinaseProtein2.7.2.3 (Enzyme Nomenclature)
phosphoglycerate mutaseProtein5.4.2.1 (Enzyme Nomenclature)
phosphopyruvate hydrataseProtein4.2.1.11 (Enzyme Nomenclature)
pyruvateMetabolite
pyruvate kinaseProtein2.7.1.40 (Enzyme Nomenclature)
triose phosphate isomeraseProtein5.3.1.1 (Enzyme Nomenclature)

Annotated Interactions

No annotated interactions

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