Starch metabolism (Arabidopsis thaliana)

From WikiPathways

Description

Quality Tags

Ontology Terms

Bibliography

1. Abhijit Karve, Bradley L. Rauh, Xiaoxia Xia, Muthugapatti Kandasamy, Richard B. Meagher, Jen Sheen, Brandon d. Moore; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis''; Planta, 2008 PubMed Europe PMC Scholia

History

View all...

Compare	Revision	Action	Time	User	Comment
	122568 Approved Featured	view	10:35, 16 April 2022	Egonw	Made three pathways clickable
	118335	view	13:12, 27 May 2021	Mkutmon	fixed publication ref
	117256	view	10:01, 19 May 2021	Eweitz	Modified title
	105901	view	11:36, 16 August 2019	Mkutmon	HMDB identifier normalization
	85067	view	11:56, 10 April 2016	Egonw	Removed duplicate info from PubMedCentral ID.
	83905	view	22:07, 28 December 2015	Sbohler	Primary ID of proteins changed to Ensembl
	83904	view	18:37, 28 December 2015	Sbohler	Minor cosmetic changes
	83903	view	18:34, 28 December 2015	Sbohler	eaction identifier corrections regarding cellular compartment.
	83902	view	17:48, 28 December 2015	Sbohler	Reaction annotations modified, pathway corrected.
	83901	view	17:01, 28 December 2015	Sbohler	Reactions annotated with KEGG Reaction IDs
	78385	view	10:22, 7 January 2015	MaintBot	added missing graphIds
	76153	view	13:40, 12 June 2014	Egonw	PubMed Central IDs don't work with the "PubMed" database; replaced the ID with the matching PubMed ID.
	76142	view	14:50, 11 June 2014	Sbohler	All protein nodes are now annotated with Uniprot-TrEMBL IDs. Some nodes were split into isoforms and/or subunits.
	75327	view	13:41, 19 May 2014	Sbohler	Added cell border and label for Chloroplast.
	73923	view	10:21, 4 March 2014	Anwesha	Ontology Term : 'starch biosynthetic pathway' added !
	73922	view	10:16, 4 March 2014	Anwesha	Modified description
	73918	view	09:55, 4 March 2014	Sbohler	Modified description
	73914	view	09:27, 4 March 2014	Anwesha	Added metabolite idenitifiers
	73913	view	09:24, 4 March 2014	Anwesha	Added metabolite identifiers
	73912	view	09:23, 4 March 2014	Anwesha	Periodical save, work in progress
	73911	view	09:19, 4 March 2014	Anwesha	Added pathway identifiers
	73606	view	13:22, 4 February 2014	Anwesha	New pathway

External references

DataNodes

View all...

Name	Type	Database reference	Comment
ADP	Metabolite
ADP-glucose pyrophosphorylase	Protein	2.7.7.27 (Enzyme Nomenclature)
ADP-glucose	Metabolite	HMDB06557 (HMDB)
ADP	Metabolite	C00008 (KEGG Compound)
ATP	Metabolite	HMDB00538 (HMDB)
Calvin-Benson Cycle	Pathway	WP2619 (WikiPathways)
Glycolysis	Pathway	WP2621 (WikiPathways)
H2O	Metabolite	HMDB02111 (HMDB)
PPi	Metabolite
Pi	Metabolite
Sucrose Metabolism	Pathway	WP2623 (WikiPathways)
amylase	Protein	3.2.1.3 (Enzyme Nomenclature)
fructose 1,6-bisphosphate	Metabolite	HMDB01058 (HMDB)
fructose 6-phosphate	Metabolite	HMDB00124 (HMDB)
fructose-1,6-bisphosphatase	Protein	3.1.3.11 (Enzyme Nomenclature)
glucokinase	Protein	2.7.1.2 (Enzyme Nomenclature)
glucose 1-phosphate	Metabolite	HMDB01586 (HMDB)
glucose 6-phosphate	Metabolite	HMDB01401 (HMDB)
glucose	Metabolite	HMDB00122 (HMDB)
hexosephosphate isomerase	Protein	5.3.1.9 (Enzyme Nomenclature)
phosphoglucomutase	Protein	5.4.2.2 (Enzyme Nomenclature)
starch phosphorylase	Protein	2.4.1.1 (Enzyme Nomenclature)
starch synthase	Protein	2.4.1.21 (Enzyme Nomenclature)
starch	Metabolite	C00369 (KEGG Compound)

Annotated Interactions

No annotated interactions