Calvin-Benson cycle (Arabidopsis thaliana)

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Description

Quality Tags

Ontology Terms

Bibliography

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History

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Compare	Revision	Action	Time	User	Comment
	123537	view	14:42, 2 August 2022	Egonw	Made two pathways clickable
	118209	view	11:43, 26 May 2021	Eweitz	Modified title
	105898	view	11:36, 16 August 2019	Mkutmon	HMDB identifier normalization
	97813	view	14:31, 9 June 2018	Egonw	Undo revision 97771 by [[Special:Contributions/Youssefwalid|Youssefwalid]] ([[User talk:Youssefwalid|Talk]]) Text cannot be copied from other websites.
	97771	view	13:34, 7 June 2018	Youssefwalid	Modified description
	78379	view	10:22, 7 January 2015	MaintBot	added missing graphIds
	76143	view	15:53, 11 June 2014	Sbohler	All protein nodes are now annotated with Uniprot-TrEMBL IDs. Some nodes were split up into their different isoforms/subunits.
	75326	view	13:38, 19 May 2014	Sbohler	Added cell border and label for Chloroplast.
	73916	view	09:45, 4 March 2014	Anwesha	Added pathway identifiers
	73915	view	09:42, 4 March 2014	Anwesha	Added metabolite identifiers
	73881	view	21:54, 26 February 2014	MaintBot	Ontology Term : 'photosynthesis pathway' added !
	73880	view	21:52, 26 February 2014	MaintBot	fixing scaling issue
	73603	view	13:21, 4 February 2014	Anwesha	New pathway

External references

DataNodes

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Name	Type	Database reference	Comment
1,3-bisphosphoglycerate	Metabolite
2-phosphoglycolate	Metabolite
2H+	Metabolite	CHEBI:18276 (ChEBI)
3-phosphoglycerate	Metabolite
3-phosphoglycerate	Metabolite	C00197 (KEGG Compound)
ADP	Metabolite
ATP	Metabolite	HMDB00538 (HMDB)
CO2 + H2O	Metabolite
CO2	Metabolite	HMDB01967 (HMDB)
Dihydroxyacetone phosphate	Metabolite	HMDB01473 (HMDB)
Glycolysis	Pathway
H+	Metabolite	CHEBI:15378 (ChEBI)
H2CO3	Metabolite
H2O	Metabolite	HMDB02111 (HMDB)
NADP+	Metabolite	HMDB00217 (HMDB)
NADPH	Metabolite	HMDB00221 (HMDB)
O2	Metabolite
Photorespiration	Pathway
Pi	Metabolite
RuBisCO LSU	Protein	O03042 (Uniprot-TrEMBL)
RuBisCO SSU	Protein	4.1.1.39 (Enzyme Nomenclature)
RuBisCO activase	Protein	P10896 (Uniprot-TrEMBL)
RuBisCO activase	Protein	Q941B7 (Uniprot-TrEMBL)
Starch Metabolism	Pathway
aldolase	Protein	O65581 (Uniprot-TrEMBL)
aldolase	Protein	O65581 (Uniprot-TrEMBL)
aldolase	Protein	Q944G9 (Uniprot-TrEMBL)
carbonic anhydrase 1	Protein	P27140 (Uniprot-TrEMBL)
carbonic anhydrase 2	Protein	P42737 (Uniprot-TrEMBL)
erythrose 4-phosphate	Metabolite	HMDB01321 (HMDB)
fructose 1,6-bisphosphate	Metabolite	HMDB01058 (HMDB)
fructose 6-phosphate	Metabolite	HMDB00124 (HMDB)
fructose-1,6-bisphosphatase	Protein	3.1.3.11 (Enzyme Nomenclature)
fructose-1,6-bisphosphate	Metabolite	HMDB01058 (HMDB)
glyceraldahyde-3-phosphate	Metabolite
glyceraldehyde-3-phosphate dehydrogenase	Protein	P25856 (Uniprot-TrEMBL)
phosphoglycerate kinase	Protein	2.7.2.3 (Enzyme Nomenclature)
phosphoribulokinase	Protein	2.7.1.19 (Enzyme Nomenclature)
ribose 5-phosphate	Metabolite	HMDB01548 (HMDB)
ribulose 5-phosphate 3-epimerase	Protein	5.1.3.1 (Enzyme Nomenclature)
ribulose 5-phosphate isomerase	Protein	5.1.3.1 (Enzyme Nomenclature)
ribulose 5-phosphate	Metabolite	HMDB00618 (HMDB)
ribulose-1,5-bisphosphate	Metabolite
sedoheptulose 1,7-bisphosphatase	Protein	3.1.3.37 (Enzyme Nomenclature)
sedoheptulose 1,7-bisphosphate	Metabolite
sedoheptulose 7-phosphate	Metabolite	HMDB01068 (HMDB)
transketolase	Protein	2.2.1.1 (Enzyme Nomenclature)
triose phosphate isomerase	Protein	5.3.1.1 (Enzyme Nomenclature)
xyluloase-5-phosphate	Metabolite

Annotated Interactions

No annotated interactions