Signaling by PDGF (Homo sapiens)
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Bibliography
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- Turjanski AG, Vaqué JP, Gutkind JS.; ''MAP kinases and the control of nuclear events.''; PubMed Europe PMC Scholia
- Yokote K, Margolis B, Heldin CH, Claesson-Welsh L.; ''Grb7 is a downstream signaling component of platelet-derived growth factor alpha- and beta-receptors.''; PubMed Europe PMC Scholia
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- Kashishian A, Kazlauskas A, Cooper JA.; ''Phosphorylation sites in the PDGF receptor with different specificities for binding GAP and PI3 kinase in vivo.''; PubMed Europe PMC Scholia
- Kashishian A, Cooper JA.; ''Phosphorylation sites at the C-terminus of the platelet-derived growth factor receptor bind phospholipase C gamma 1.''; PubMed Europe PMC Scholia
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- Sun T, Aceto N, Meerbrey KL, Kessler JD, Zhou C, Migliaccio I, Nguyen DX, Pavlova NN, Botero M, Huang J, Bernardi RJ, Schmitt E, Hu G, Li MZ, Dephoure N, Gygi SP, Rao M, Creighton CJ, Hilsenbeck SG, Shaw CA, Muzny D, Gibbs RA, Wheeler DA, Osborne CK, Schiff R, Bentires-Alj M, Elledge SJ, Westbrook TF.; ''Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase.''; PubMed Europe PMC Scholia
- Plotnikov A, Zehorai E, Procaccia S, Seger R.; ''The MAPK cascades: signaling components, nuclear roles and mechanisms of nuclear translocation.''; PubMed Europe PMC Scholia
- Somasundaram R, Schuppan D.; ''Type I, II, III, IV, V, and VI collagens serve as extracellular ligands for the isoforms of platelet-derived growth factor (AA, BB, and AB).''; PubMed Europe PMC Scholia
- Lechleider RJ, Sugimoto S, Bennett AM, Kashishian AS, Cooper JA, Shoelson SE, Walsh CT, Neel BG.; ''Activation of the SH2-containing phosphotyrosine phosphatase SH-PTP2 by its binding site, phosphotyrosine 1009, on the human platelet-derived growth factor receptor.''; PubMed Europe PMC Scholia
- Nishimura R, Li W, Kashishian A, Mondino A, Zhou M, Cooper J, Schlessinger J.; ''Two signaling molecules share a phosphotyrosine-containing binding site in the platelet-derived growth factor receptor.''; PubMed Europe PMC Scholia
- Satoh T, Fantl WJ, Escobedo JA, Williams LT, Kaziro Y.; ''Platelet-derived growth factor receptor mediates activation of ras through different signaling pathways in different cell types.''; PubMed Europe PMC Scholia
- Heldin CH, Westermark B.; ''Mechanism of action and in vivo role of platelet-derived growth factor.''; PubMed Europe PMC Scholia
- Chardin P, Camonis JH, Gale NW, van Aelst L, Schlessinger J, Wigler MH, Bar-Sagi D.; ''Human Sos1: a guanine nucleotide exchange factor for Ras that binds to GRB2.''; PubMed Europe PMC Scholia
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- Fredriksson L, Li H, Eriksson U.; ''The PDGF family: four gene products form five dimeric isoforms.''; PubMed Europe PMC Scholia
- Gelderloos JA, Rosenkranz S, Bazenet C, Kazlauskas A.; ''A role for Src in signal relay by the platelet-derived growth factor alpha receptor.''; PubMed Europe PMC Scholia
- Kazlauskas A, Kashishian A, Cooper JA, Valius M.; ''GTPase-activating protein and phosphatidylinositol 3-kinase bind to distinct regions of the platelet-derived growth factor receptor beta subunit.''; PubMed Europe PMC Scholia
- Leduc R, Molloy SS, Thorne BA, Thomas G.; ''Activation of human furin precursor processing endoprotease occurs by an intramolecular autoproteolytic cleavage.''; PubMed Europe PMC Scholia
- Roberts PJ, Der CJ.; ''Targeting the Raf-MEK-ERK mitogen-activated protein kinase cascade for the treatment of cancer.''; PubMed Europe PMC Scholia
- Fantl WJ, Escobedo JA, Martin GA, Turck CW, del Rosario M, McCormick F, Williams LT.; ''Distinct phosphotyrosines on a growth factor receptor bind to specific molecules that mediate different signaling pathways.''; PubMed Europe PMC Scholia
- Brown MD, Sacks DB.; ''Protein scaffolds in MAP kinase signalling.''; PubMed Europe PMC Scholia
- Raines EW, Lane TF, Iruela-Arispe ML, Ross R, Sage EH.; ''The extracellular glycoprotein SPARC interacts with platelet-derived growth factor (PDGF)-AB and -BB and inhibits the binding of PDGF to its receptors.''; PubMed Europe PMC Scholia
- Heldin CH, Ostman A, Rönnstrand L.; ''Signal transduction via platelet-derived growth factor receptors.''; PubMed Europe PMC Scholia
- Ostman A, Thyberg J, Westermark B, Heldin CH.; ''PDGF-AA and PDGF-BB biosynthesis: proprotein processing in the Golgi complex and lysosomal degradation of PDGF-BB retained intracellularly.''; PubMed Europe PMC Scholia
- Stover DR, Furet P, Lydon NB.; ''Modulation of the SH2 binding specificity and kinase activity of Src by tyrosine phosphorylation within its SH2 domain.''; PubMed Europe PMC Scholia
- Cseh B, Doma E, Baccarini M.; ''"RAF" neighborhood: protein-protein interaction in the Raf/Mek/Erk pathway.''; PubMed Europe PMC Scholia
- Roskoski R.; ''ERK1/2 MAP kinases: structure, function, and regulation.''; PubMed Europe PMC Scholia
- Meisenhelder J, Suh PG, Rhee SG, Hunter T.; ''Phospholipase C-gamma is a substrate for the PDGF and EGF receptor protein-tyrosine kinases in vivo and in vitro.''; PubMed Europe PMC Scholia
- Vignais ML, Sadowski HB, Watling D, Rogers NC, Gilman M.; ''Platelet-derived growth factor induces phosphorylation of multiple JAK family kinases and STAT proteins.''; PubMed Europe PMC Scholia
- Patterson RL, van Rossum DB, Nikolaidis N, Gill DL, Snyder SH.; ''Phospholipase C-gamma: diverse roles in receptor-mediated calcium signaling.''; PubMed Europe PMC Scholia
- Mori S, Rönnstrand L, Yokote K, Engström A, Courtneidge SA, Claesson-Welsh L, Heldin CH.; ''Identification of two juxtamembrane autophosphorylation sites in the PDGF beta-receptor; involvement in the interaction with Src family tyrosine kinases.''; PubMed Europe PMC Scholia
- Arvidsson AK, Rupp E, Nånberg E, Downward J, Rönnstrand L, Wennström S, Schlessinger J, Heldin CH, Claesson-Welsh L.; ''Tyr-716 in the platelet-derived growth factor beta-receptor kinase insert is involved in GRB2 binding and Ras activation.''; PubMed Europe PMC Scholia
- Davies H, Bignell GR, Cox C, Stephens P, Edkins S, Clegg S, Teague J, Woffendin H, Garnett MJ, Bottomley W, Davis N, Dicks E, Ewing R, Floyd Y, Gray K, Hall S, Hawes R, Hughes J, Kosmidou V, Menzies A, Mould C, Parker A, Stevens C, Watt S, Hooper S, Wilson R, Jayatilake H, Gusterson BA, Cooper C, Shipley J, Hargrave D, Pritchard-Jones K, Maitland N, Chenevix-Trench G, Riggins GJ, Bigner DD, Palmieri G, Cossu A, Flanagan A, Nicholson A, Ho JW, Leung SY, Yuen ST, Weber BL, Seigler HF, Darrow TL, Paterson H, Marais R, Marshall CJ, Wooster R, Stratton MR, Futreal PA.; ''Mutations of the BRAF gene in human cancer.''; PubMed Europe PMC Scholia
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- McKay MM, Morrison DK.; ''Integrating signals from RTKs to ERK/MAPK.''; PubMed Europe PMC Scholia
- Fukumoto T, Kubota Y, Kitanaka A, Yamaoka G, Ohara-Waki F, Imataki O, Ohnishi H, Ishida T, Tanaka T.; ''Gab1 transduces PI3K-mediated erythropoietin signals to the Erk pathway and regulates erythropoietin-dependent proliferation and survival of erythroid cells.''; PubMed Europe PMC Scholia
History
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External references
DataNodes
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Name | Type | Database reference | Comment |
---|---|---|---|
3x4Hyp-3Hyp-5Hyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-5Hyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-GalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-GalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-GlcGalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-3Hyp-GlcGalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-5Hyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-5Hyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-GalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-GalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
3x4Hyp-GlcGalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
3x4Hyp-GlcGalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
5Hyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
5Hyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
ADP | Metabolite | CHEBI:16761 (ChEBI) | |
ATP | Metabolite | CHEBI:15422 (ChEBI) | |
Active PDGF dimers (AA, AB, BB) | Complex | REACT_17845 (Reactome) | |
Active PDGF dimers (CC, DD) | Complex | REACT_17802 (Reactome) | |
BCAR1 [cytosol] | Protein | P56945 (Uniprot-TrEMBL) | |
BCAR1 | Protein | P56945 (Uniprot-TrEMBL) | |
COL4A1(173-1669)
[extracellular region] | Protein | P02462 (Uniprot-TrEMBL) | |
COL4A2(184-?)
[extracellular region] | Protein | P08572 (Uniprot-TrEMBL) | |
COL4A3(29-1670)
[extracellular region] | Protein | Q01955 (Uniprot-TrEMBL) | |
COL4A4(39-?)
[extracellular region] | Protein | P53420 (Uniprot-TrEMBL) | |
COL4A5(27-?)
[extracellular region] | Protein | P29400 (Uniprot-TrEMBL) | |
COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
COL9A1
[extracellular region] | Protein | P20849 (Uniprot-TrEMBL) | |
COL9A2
[extracellular region] | Protein | Q14055 (Uniprot-TrEMBL) | |
COL9A3
[extracellular region] | Protein | Q14050 (Uniprot-TrEMBL) | |
CRK(2-304) [cytosol] | Protein | P46108 (Uniprot-TrEMBL) | |
CRK, CRKL | Protein | REACT_17492 (Reactome) | |
CRKL [cytosol] | Protein | P46109 (Uniprot-TrEMBL) | |
Classical PDGF
precursor dimers (AA, AB, BB) | Complex | REACT_17671 (Reactome) | |
Cleaved classical PDGF peptides | Protein | REACT_17262 (Reactome) | |
Cleaved novel PDGF fragments | Protein | REACT_18041 (Reactome) | |
DAG and IP3 signaling | Pathway | WP2688 (WikiPathways) | This pathway describes the generation of DAG and IP3 by the PLCgamma-mediated hydrolysis of PIP2 and the subsequent downstream signaling events. |
Extracellular matrix ligands | Protein | REACT_17129 (Reactome) | |
FURIN | Protein | P09958 (Uniprot-TrEMBL) | |
GDP [cytosol] | Metabolite | CHEBI:17552 (ChEBI) | |
GDP | Metabolite | CHEBI:17552 (ChEBI) | |
GRB2-1 [cytosol] | Protein | P62993-1 (Uniprot-TrEMBL) | |
GRB2:SOS1 | Complex | REACT_4435 (Reactome) | |
GRB7 [cytosol] | Protein | Q14451 (Uniprot-TrEMBL) | |
GRB7 | Protein | Q14451 (Uniprot-TrEMBL) | |
GTP [cytosol] | Metabolite | CHEBI:15996 (ChEBI) | |
GTP | Metabolite | CHEBI:15996 (ChEBI) | |
GalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
GalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
GlcGalHyl-COL6A1
[extracellular region] | Protein | P12109 (Uniprot-TrEMBL) | |
GlcGalHyl-COL6A2
[extracellular region] | Protein | P12110 (Uniprot-TrEMBL) | |
HRAS(1-186) [plasma membrane] | Protein | P01112 (Uniprot-TrEMBL) | |
Heparan sulfate
N-acetyl-alpha-D-glucosaminide [extracellular region] | Metabolite | CHEBI:17421 (ChEBI) | |
Heparan sulfate
alpha-D-glucosaminide [extracellular region] | Metabolite | CHEBI:18137 (ChEBI) | |
KRAS(1-186) [plasma membrane] | Protein | P01116 (Uniprot-TrEMBL) | |
NCK1 [cytosol] | Protein | P16333 (Uniprot-TrEMBL) | |
NCK2 [cytosol] | Protein | O43639 (Uniprot-TrEMBL) | |
NCK | Protein | REACT_17190 (Reactome) | |
NRAS [plasma membrane] | Protein | P01111 (Uniprot-TrEMBL) | |
Novel PDGF precursor dimers (CC, DD) | Complex | REACT_17079 (Reactome) | |
Novel PDGF precursor dimers (CC, DD) | Complex | REACT_17162 (Reactome) | |
PDGF A and B chains:ECM complex | Complex | REACT_17710 (Reactome) | |
PDGF A and B chains with retention motif | Protein | REACT_17714 (Reactome) | |
PDGF alpha receptor: PDGF dimers | Complex | REACT_17393 (Reactome) | |
PDGF alpha/beta:PDGF AB and BB dimers | Complex | REACT_17544 (Reactome) | |
PDGF beta
receptor:PDGF chain B homodimer | Complex | REACT_17457 (Reactome) | |
PDGF precursor
dimers (AA, BB, A/B, CC, DD) | Complex | REACT_17541 (Reactome) | |
PDGF precursor
dimers (AA, BB, A/B, CC, DD) | Complex | REACT_17912 (Reactome) | |
PDGF receptor monomer | Protein | REACT_18211 (Reactome) | |
PDGF:PDGF receptor dimer | Complex | REACT_18025 (Reactome) | |
PDGF:Phospho-PDGF
receptor dimer:Crk:p130Cas:C3G | Complex | REACT_17351 (Reactome) | |
PDGF:Phospho-PDGF
receptor dimer:Grb2:Sos1 | Complex | REACT_18248 (Reactome) | |
PDGF:Phospho-PDGF
receptor dimer:PLC-gamma | Complex | REACT_17327 (Reactome) | |
PDGF:Phospho-PDGF
receptor dimer:phospho-Src | Complex | REACT_17206 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer:Crk | Complex | REACT_17941 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer:Grb7 | Complex | REACT_17607 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer:PI3K | Complex | REACT_17825 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer:SHP2 | Complex | REACT_17654 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer:Src | Complex | REACT_18132 (Reactome) | |
PDGF:Phospho-PDGF receptor dimer | Complex | REACT_17756 (Reactome) | |
PDGF:Phospho-PDGFR receptor dimer:Nck | Complex | REACT_17490 (Reactome) | |
PDGF:p-PDGFR dimer:p-PLCgamma | Complex | REACT_111673 (Reactome) | |
PDGF:phospho-PDGF receptor dimer:STAT | Complex | REACT_17883 (Reactome) | |
PDGFA-1
[extracellular region] | Protein | P04085-1 (Uniprot-TrEMBL) | |
PDGFA-1(1-211) [Golgi membrane] | Protein | P04085-1 (Uniprot-TrEMBL) | |
PDGFA-1(1-211)
[endoplasmic reticulum lumen] | Protein | P04085-1 (Uniprot-TrEMBL) | |
PDGFA-2
[extracellular region] | Protein | P04085-2 (Uniprot-TrEMBL) | |
PDGFA-2 [Golgi membrane] | Protein | P04085-2 (Uniprot-TrEMBL) | |
PDGFA-2 [endoplasmic reticulum lumen] | Protein | P04085-2 (Uniprot-TrEMBL) | |
PDGFB [extracellular region] | Protein | P01127 (Uniprot-TrEMBL) | |
PDGFB(1-241)
[endoplasmic reticulum lumen] | Protein | P01127 (Uniprot-TrEMBL) | |
PDGFB(1-241) [Golgi membrane] | Protein | P01127 (Uniprot-TrEMBL) | |
PDGFB(82-241)
[extracellular region] | Protein | P01127 (Uniprot-TrEMBL) | |
PDGFC-1 [Golgi membrane] | Protein | Q9NRA1-1 (Uniprot-TrEMBL) | |
PDGFC-1 [endoplasmic reticulum lumen] | Protein | Q9NRA1-1 (Uniprot-TrEMBL) | |
PDGFC-1(23-345)
[extracellular region] | Protein | Q9NRA1-1 (Uniprot-TrEMBL) | |
PDGFC-1(235-345)
[extracellular region] | Protein | Q9NRA1-1 (Uniprot-TrEMBL) | |
PDGFD(1-370)
[endoplasmic reticulum lumen] | Protein | Q9GZP0 (Uniprot-TrEMBL) | |
PDGFD(1-370) [Golgi membrane] | Protein | Q9GZP0 (Uniprot-TrEMBL) | |
PDGFD(19-370)
[extracellular region] | Protein | Q9GZP0 (Uniprot-TrEMBL) | |
PDGFD(258-370)
[extracellular region] | Protein | Q9GZP0 (Uniprot-TrEMBL) | |
PDGFRA [plasma membrane] | Protein | P16234 (Uniprot-TrEMBL) | |
PDGFRB [plasma membrane] | Protein | P09619 (Uniprot-TrEMBL) | |
PI(3,4,5)P3 | Metabolite | CHEBI:16618 (ChEBI) | |
PI(4,5)P2 | Metabolite | CHEBI:18348 (ChEBI) | |
PI3K | Complex | REACT_4240 (Reactome) | |
PIK3CA [cytosol] | Protein | P42336 (Uniprot-TrEMBL) | |
PIK3CB [cytosol] | Protein | P42338 (Uniprot-TrEMBL) | |
PIK3R1 [cytosol] | Protein | P27986 (Uniprot-TrEMBL) | |
PIK3R2 [cytosol] | Protein | O00459 (Uniprot-TrEMBL) | |
PIP3 activates AKT signaling | Pathway | WP2653 (WikiPathways) | Signaling by AKT is one of the key outcomes of receptor tyrosine kinase (RTK) activation. AKT is activated by the cellular second messenger PIP3, a phospholipid that is generated by PI3K. In ustimulated cells, PI3K class IA enzymes reside in the cytosol as inactive heterodimers composed of p85 regulatory subunit and p110 catalytic subunit. In this complex, p85 stabilizes p110 while inhibiting its catalytic activity. Upon binding of extracellular ligands to RTKs, receptors dimerize and undergo autophosphorylation. The regulatory subunit of PI3K, p85, is recruited to phosphorylated cytosolic RTK domains either directly or indirectly, through adaptor proteins, leading to a conformational change in the PI3K IA heterodimer that relieves inhibition of the p110 catalytic subunit. Activated PI3K IA phosphorylates PIP2, converting it to PIP3; this reaction is negatively regulated by PTEN phosphatase. PIP3 recruits AKT to the plasma membrane, allowing TORC2 to phosphorylate a conserved serine residue of AKT. Phosphorylation of this serine induces a conformation change in AKT, exposing a conserved threonine residue that is then phosphorylated by PDPK1 (PDK1). Phosphorylation of both the threonine and the serine residue is required to fully activate AKT. The active AKT then dissociates from PIP3 and phosphorylates a number of cytosolic and nuclear proteins that play important roles in cell survival and metabolism. For a recent review of AKT signaling, please refer to Manning and Cantley, 2007. |
PLCG1(2-1290) [plasma membrane] | Protein | P19174 (Uniprot-TrEMBL) | |
PLCG1(2-1290) | Protein | P19174 (Uniprot-TrEMBL) | |
PTPN11 [cytosol] | Protein | Q06124 (Uniprot-TrEMBL) | |
PTPN11 | Protein | Q06124 (Uniprot-TrEMBL) | |
Phospho PDGF
alpha-beta dimer:PDGF AB or BB dimers | Complex | REACT_17875 (Reactome) | |
Phospho PDGF alpha receptor:PDGF dimers | Complex | REACT_17261 (Reactome) | |
Phospho PDGF beta
receptor: PDGF chain B homodimer | Complex | REACT_17403 (Reactome) | |
Phospho-beta
receptor homodimer:GAP | Complex | REACT_17783 (Reactome) | |
RAF/MAP kinase cascade | Pathway | WP2735 (WikiPathways) | The MAP kinase cascade describes a sequence of phosphorylation events involving serine/threonine-specific protein kinases. Used by various signal transduction pathways, this cascade constitutes a common 'module' in the transmission of an extracellular signal into the nucleus. |
RAPGEF1 [cytosol] | Protein | Q13905 (Uniprot-TrEMBL) | |
RAPGEF1 | Protein | Q13905 (Uniprot-TrEMBL) | |
RASA1 [cytosol] | Protein | P20936 (Uniprot-TrEMBL) | |
RASA1 | Protein | P20936 (Uniprot-TrEMBL) | |
SOS1 [cytosol] | Protein | Q07889 (Uniprot-TrEMBL) | |
SPP1(17-?)
[extracellular region] | Protein | P10451 (Uniprot-TrEMBL) | |
SRC-1 [plasma membrane] | Protein | P12931-1 (Uniprot-TrEMBL) | |
SRC-1 | Protein | P12931-1 (Uniprot-TrEMBL) | |
STAT family members | Protein | REACT_17706 (Reactome) | |
STAT1 [cytosol] | Protein | P42224 (Uniprot-TrEMBL) | |
STAT3 [cytosol] | Protein | P40763 (Uniprot-TrEMBL) | |
STAT5A [cytosol] | Protein | P42229 (Uniprot-TrEMBL) | |
STAT5B [cytosol] | Protein | P51692 (Uniprot-TrEMBL) | |
STAT6 [cytosol] | Protein | P42226 (Uniprot-TrEMBL) | |
THBS1 [extracellular region] | Protein | P07996 (Uniprot-TrEMBL) | |
THBS2 [extracellular region] | Protein | P35442 (Uniprot-TrEMBL) | |
THBS3 [extracellular region] | Protein | P49746 (Uniprot-TrEMBL) | |
THBS4 [extracellular region] | Protein | P35443 (Uniprot-TrEMBL) | |
p-11Y-PDGFRA [plasma membrane] | Protein | P16234 (Uniprot-TrEMBL) | |
p-12Y-PDGFRB [plasma membrane] | Protein | P09619 (Uniprot-TrEMBL) | |
p-4Y-PLCG1 [plasma membrane] | Protein | P19174 (Uniprot-TrEMBL) | |
p-4Y-PLCG1 | Protein | P19174 (Uniprot-TrEMBL) | |
p-Y419-SRC-1 [plasma membrane] | Protein | P12931-1 (Uniprot-TrEMBL) | |
p21 RAS:GDP | Complex | REACT_2657 (Reactome) | |
p21 RAS:GTP | Complex | REACT_4782 (Reactome) | |
serine-type
endopeptidases involved in novel PDGF processing | REACT_17837 (Reactome) |
Annotated Interactions
View all... |
Source | Target | Type | Database reference | Comment |
---|---|---|---|---|
ADP | Arrow | REACT_16877 (Reactome) | ||
ADP | Arrow | REACT_16926 (Reactome) | ||
ADP | Arrow | REACT_16991 (Reactome) | ||
ADP | Arrow | REACT_16993 (Reactome) | ||
ADP | Arrow | REACT_17034 (Reactome) | ||
ATP | REACT_16877 (Reactome) | |||
ATP | REACT_16926 (Reactome) | |||
ATP | REACT_16991 (Reactome) | |||
ATP | REACT_16993 (Reactome) | |||
ATP | REACT_17034 (Reactome) | |||
Active PDGF dimers (AA, AB, BB) | Arrow | REACT_17059 (Reactome) | ||
Active PDGF dimers (AA, AB, BB) | REACT_16905 (Reactome) | |||
Active PDGF dimers (CC, DD) | Arrow | REACT_16891 (Reactome) | ||
BCAR1 | REACT_16951 (Reactome) | |||
CRK, CRKL | REACT_16940 (Reactome) | |||
Classical PDGF
precursor dimers (AA, AB, BB) | REACT_17059 (Reactome) | |||
Cleaved classical PDGF peptides | Arrow | REACT_17059 (Reactome) | ||
Cleaved novel PDGF fragments | Arrow | REACT_16891 (Reactome) | ||
Extracellular matrix ligands | REACT_16880 (Reactome) | |||
FURIN | mim-catalysis | REACT_17059 (Reactome) | ||
GDP | Arrow | REACT_16923 (Reactome) | ||
GRB2:SOS1 | REACT_16901 (Reactome) | |||
GRB7 | REACT_17063 (Reactome) | |||
GTP | REACT_16923 (Reactome) | |||
NCK | REACT_16997 (Reactome) | |||
Novel PDGF precursor dimers (CC, DD) | Arrow | REACT_17022 (Reactome) | ||
Novel PDGF precursor dimers (CC, DD) | REACT_16891 (Reactome) | |||
Novel PDGF precursor dimers (CC, DD) | REACT_17022 (Reactome) | |||
PDGF A and B chains:ECM complex | Arrow | REACT_16880 (Reactome) | ||
PDGF A and B chains with retention motif | REACT_16880 (Reactome) | |||
PDGF alpha receptor: PDGF dimers | REACT_16993 (Reactome) | |||
PDGF alpha receptor: PDGF dimers | mim-catalysis | REACT_16993 (Reactome) | ||
PDGF alpha/beta:PDGF AB and BB dimers | REACT_17034 (Reactome) | |||
PDGF alpha/beta:PDGF AB and BB dimers | mim-catalysis | REACT_17034 (Reactome) | ||
PDGF beta
receptor:PDGF chain B homodimer | REACT_16926 (Reactome) | |||
PDGF beta
receptor:PDGF chain B homodimer | mim-catalysis | REACT_16926 (Reactome) | ||
PDGF precursor
dimers (AA, BB, A/B, CC, DD) | REACT_17051 (Reactome) | |||
PDGF precursor
dimers (AA, BB, A/B, CC, DD) | Arrow | REACT_17051 (Reactome) | ||
PDGF receptor monomer | REACT_16905 (Reactome) | |||
PDGF:PDGF receptor dimer | Arrow | REACT_16905 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:Crk:p130Cas:C3G | Arrow | REACT_16951 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:Grb2:Sos1 | Arrow | REACT_16901 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:Grb2:Sos1 | mim-catalysis | REACT_16923 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:PLC-gamma | Arrow | REACT_16998 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:PLC-gamma | REACT_111134 (Reactome) | |||
PDGF:Phospho-PDGF
receptor dimer:PLC-gamma | mim-catalysis | REACT_111134 (Reactome) | ||
PDGF:Phospho-PDGF
receptor dimer:phospho-Src | Arrow | REACT_16991 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:Crk | Arrow | REACT_16940 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:Crk | REACT_16951 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer:Grb7 | Arrow | REACT_17063 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:PI3K | Arrow | REACT_17052 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:PI3K | mim-catalysis | REACT_16877 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:SHP2 | Arrow | REACT_16960 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:Src | Arrow | REACT_17048 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer:Src | REACT_16991 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | Arrow | REACT_111066 (Reactome) | ||
PDGF:Phospho-PDGF receptor dimer | REACT_16901 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_16940 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_16960 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_16982 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_16997 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_16998 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_17048 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_17052 (Reactome) | |||
PDGF:Phospho-PDGF receptor dimer | REACT_17063 (Reactome) | |||
PDGF:Phospho-PDGFR receptor dimer:Nck | Arrow | REACT_16997 (Reactome) | ||
PDGF:p-PDGFR dimer:p-PLCgamma | Arrow | REACT_111134 (Reactome) | ||
PDGF:p-PDGFR dimer:p-PLCgamma | REACT_111066 (Reactome) | |||
PDGF:phospho-PDGF receptor dimer:STAT | Arrow | REACT_16982 (Reactome) | ||
PI(3,4,5)P3 | Arrow | REACT_16877 (Reactome) | ||
PI(4,5)P2 | REACT_16877 (Reactome) | |||
PI3K | REACT_17052 (Reactome) | |||
PLCG1(2-1290) | REACT_16998 (Reactome) | |||
PTPN11 | REACT_16960 (Reactome) | |||
Phospho PDGF
alpha-beta dimer:PDGF AB or BB dimers | Arrow | REACT_17034 (Reactome) | ||
Phospho PDGF alpha receptor:PDGF dimers | Arrow | REACT_16993 (Reactome) | ||
Phospho PDGF beta
receptor: PDGF chain B homodimer | Arrow | REACT_16926 (Reactome) | ||
Phospho PDGF beta
receptor: PDGF chain B homodimer | REACT_16950 (Reactome) | |||
Phospho-beta
receptor homodimer:GAP | Arrow | REACT_16950 (Reactome) | ||
RAPGEF1 | REACT_16951 (Reactome) | |||
RASA1 | REACT_16950 (Reactome) | |||
REACT_111066 (Reactome) | Once phosphorylated, PLCgamma dissociates from the receptor. The active enzyme promotes intracelllular signaling by catalysing the hydrolysis of PIP2 to generate the second messengers IP3 and DAG. | |||
REACT_111134 (Reactome) | The activated PDGF receptor phosphorylates PLCgamma on tyrosine residues 472,771,783 and 1254, activating the enzyme. | |||
REACT_16877 (Reactome) | PI3K's preferred substrate is phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2] which is phosphorylated to the trisphosphate [PI(3,4,5)P3]. PI3-kinase and its products have been found to be of importance in PDGF-stimulated actin reorganization, and directed cell movement, as well as in the stimulation of cell growth and inhibition of apoptosis. | |||
REACT_16880 (Reactome) | The long splice version of the PDGF-A chain as well as the COOH-terminal part of the PDGF-B precursor contain C-terminal protein motifs that confer retention of the secreted factors. In both the PDGF A- and B-chains, exon 6 encodes a basic sequence that mediates interaction with components of the extracellular matrix. PDGF binds to various types of collagens, thrombospondin and osteopontin; however, the major component of the matrix involved in PDGF binding is likely to be haparan sulphate. The negatively charged sulfate groups on the disaccharide building blocks of heparan sulfate (HS) polysaccharide chains provide binding sites for positively charged amino acid sequence motifs. The precursor of the B-chain may be retained in the matrix; after maturation when the COOH-terminal retention sequence has been cleaved off, the molecule may become more diffusible. | |||
REACT_16891 (Reactome) | During the extracellular proteolytic activation of PDGF-C and PDGF-D chains, the CUB domains is removed and plasmin protease has been shown to proteolytically cleave within the hinge regions, and thus releasing the corresponding growth factor domains. In addition the protease tissue-type plasminogen activator (tPA) is also involved in the activation of PDGF-CC but not able to cleave and activate PDGF-DD. | |||
REACT_16901 (Reactome) | Grb2 is an adaptor molecule containing one SH2 domain and two SH3 domains. The SH2 domain of Grb2 binds directly to autophosphorylated PDGF receptors and with its SH3 domain it forms a complex with Sos1. The binding of Grb2/Sos1 to the PDGF receptor juxtaposes the complex towards Ras molecules leading to Ras activation. Ras is implicated in the MAP kinase cascade, a pathway in cell growth stimulation, migration and differentiation. | |||
REACT_16905 (Reactome) | PDGF dimer binds two receptors simultaneously. The receptors dimerise on binding and this is key to receptor autophosphorylation. | |||
REACT_16923 (Reactome) | SOS is the guanine nucleotide exchange factor (GEF) for Ras. SOS activates Ras nucleotide exchange from the inactive form (bound to GDP) to an active form (bound to GTP). | |||
REACT_16926 (Reactome) | Receptor dimerisation is key event in PDGF receptor activation. The intracellular parts of the receptors are juxtaposed which allows trans-phosphorylation between the two receptors in the complex. The autophosphorylation site Y857 located inside the kinase domain of beta-receptor is important for activation of the kinase. This tyrosine is conserved in the alpha-receptor (Y849 ) and in almost all other tyrosine kinase receptors. The other known autophosphorylation sites are localized outside the kinase domains of the alpha- and beta- receptors ; 11 out of 15 tyrosine residues in the intracellular, non-catalytic part of the beta-receptor are autophosphorylation sites | |||
REACT_16940 (Reactome) | Crk family of adaptor molecules consists of CrkI with one SH2 and one SH3 domains and CrkII and CrkL with one SH2 and two SH3 domains each. They bind to Tyr762 of the PDGF alpha-receptor and represent the only known SH2-domain containing molecule which binds with significantly higher affinity to the alpha-receptor than to the beta-receptor. | |||
REACT_16950 (Reactome) | GTPase-activating protein (GAP) has two SH2 domains which bind only to PDGF beta-receptors on Tyr771. GAP does not bind the alpha-receptor. GAP converts Ras-GTP to Ras-GDP, deactivating Ras. | |||
REACT_16951 (Reactome) | The presence of both SH2 and SH3 domains in Crk proteins is of crucial importance for their function as adaptor molecules. Crk forms complex with Cas, an SH3 domain-containing docking protein which has been shown to be phosphorylated after PDGF-stimulation of cells, and C3G, a nucleotide exchange protein which has been linked to the activation of JNK. | |||
REACT_16960 (Reactome) | Protein-tyrosine phosphatase 2C (SHP2) is ubiquitously expressed and has two SH2 domains, both of which need to be bound to phosphorylated tyrosine residues for full activation of catalytic activity. SHP-2 binds with high affinity to Tyr 1009 of the PDGF beta-receptor and with lower affinity to Tyr 763; it also binds to the alpha-receptor and Tyr 720 in the interkinase domain has been implicated in this binding. The phosphatase is able to dephosphorylate autophosphorylated PDGF receptors and substrates for PDGF receptors so SHP2 can be thought of as a negative regulator of signaling from PDGF receptors. SHP2 may be involved in positive signaling by binding Grb2/Sos1 and dephosphorylating the COOH-terminal tyrosine of Src, factors important for Src activation. | |||
REACT_16982 (Reactome) | Among the seven members of the Stat family, Stat1, Stat3, Stat5 alpha and -beta, and Stat6 have been shown to bind to the activated PDGF beta-receptor and to be phosphorylated after PDGF stimulation; binding also occurs to the alpha-receptor, albeit only weakly. | |||
REACT_16991 (Reactome) | Activation of Src kinases involves displacement of Tyr527 from the SH2 domain and phosphorylation of other tyrosine residues in the kinase domain. Src activation appears to be important for the mitogenic response of PDGF. | |||
REACT_16993 (Reactome) | Receptor dimerisation is key event in PDGF receptor activation. The intracellular parts of the receptors are juxtaposed which allows trans-phosphorylation between the two receptors in the complex. The autophosphorylation site Y857 located inside the kinase domain of beta-receptor is important for activation of the kinase. This tyrosine is conserved in the alpha-receptor (Y849 ) and in almost all other tyrosine kinase receptors. The other known autophosphorylation sites are localized outside the kinase domains of the alpha- and beta- receptors ; 11 out of 15 tyrosine residues in the intracellular, non-catalytic part of the beta-receptor are autophosphorylation sites | |||
REACT_16997 (Reactome) | Nck is a widely expressed protein consisting exclusively of SH2 and SH3 domains. With its SH2 doamin Nck interacts with Tyr571 of the PDGF beta-receptor and it also interacts with the alpha-receptor, but the sites of interaction has not been determined. Nck is involved in the activation of the JNK serine/threonine kinase through interaction with the serine/threonine kinases PAK1 and NIK. | |||
REACT_16998 (Reactome) | PLC-gamma 1 has been shown to bind to phosphorylated Tyr 1021 of the PDGF beta-receptor with high affinity and to Tyr 1009 with low affinity. In the alpha-receptor, Tyr 988 and Tyr 1018 bind PLC-gamma1. Association of PLC-gamma1 with the activated PDGF receptor has been shown to be necessary for its activation. | |||
REACT_17022 (Reactome) | Novel PDGFs both PDGF-CC and PDGF-DD dimers are secreted as latent factors without removal of the N-terminal CUB domain. These require further activation by extracellular proteolysis. | |||
REACT_17034 (Reactome) | Receptor dimerisation is key event in PDGF receptor activation. The intracellular parts of the receptors are juxtaposed which allows trans-phosphorylation between the two receptors in the complex. The autophosphorylation site Y857 located inside the kinase domain of beta-receptor is important for activation of the kinase. This tyrosine is conserved in the alpha-receptor (Y849 ) and in almost all other tyrosine kinase receptors. The other known autophosphorylation sites are localized outside the kinase domains of the alpha- and beta- receptors ; 11 out of 15 tyrosine residues in the intracellular, non-catalytic part of the beta-receptor are autophosphorylation sites | |||
REACT_17048 (Reactome) | The Src family of tyrosine kinases are characterized by a SH3 and a SH2 domain in addition to the kinase domain.Src is activated when the SH2 domain binds to autophosphorylation sites on PDGF receptors (Tyr579 and 581 in the beta-receptor, Tyr572 and 574 in the alpha receptor), in conjuction with dephosporylation of the COOH-terminal phosphorylated tyrosine 527. | |||
REACT_17051 (Reactome) | All the newly synthesized PDGF chains are dimerized in the ER and thereafter transferred to the Golgi complex for proteolytic processing. The four PDGF chains assemble into disulphide-bonded dimers via homo- or heterodimerization, and five different dimeric isoforms have been described so far; PDGF-AA, PDGF-AB, PDGF-BB, PDGF-CC and PDGF-DD. | |||
REACT_17052 (Reactome) | Phosphatidylinositol 3'-kinases (PI3Ks) are a family of enzymes which can phosphorylate phosphoinositides. These bind to and are activated by PDGF receptors. Tyr 740 and tyr 751 in PDGF beta-receptor, and tyr 731 and tyr 742 in PDGF alpha-receptor have been shown to be autophosphorylation sites and to bind PI3-kinase. | |||
REACT_17059 (Reactome) | After dimerization of the PDGF-A and PDGF-B chains in the ER of producing cells, the dimers are proteolytically cleaved in the trans-Golgi network during protein maturation and secretion. The dibasic-specific proprotein convertase, furin, or related convertases are involved in the conversion of proPDGF forms to active PDGF forms. | |||
REACT_17063 (Reactome) | Grb7 an adapter protein contains a single SH2 domain, a pleckstrin homology (PH) domain, and a proline-rich region. Similar to Grb2, Grb7 interacts with phosphorylated tyrosines in pYXNX motifs, including Tyr716 and Tyr775 of the PDGF beta-receptor. | |||
SRC-1 | REACT_17048 (Reactome) | |||
SRC-1 | mim-catalysis | REACT_16991 (Reactome) | ||
STAT family members | REACT_16982 (Reactome) | |||
p-4Y-PLCG1 | Arrow | REACT_111066 (Reactome) | ||
p21 RAS:GDP | REACT_16923 (Reactome) | |||
p21 RAS:GTP | Arrow | REACT_16923 (Reactome) | ||
serine-type
endopeptidases involved in novel PDGF processing | mim-catalysis | REACT_16891 (Reactome) |