Oleoresin sesquiterpene volatiles biosynthesis (Oryza sativa)

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cytosolplastid stroma(E)-alpha-bisabolenePPilongifolenedelta-selinenePPiPPigamma-humuleneTerpene synthase(E)-beta-caryophylleneFAPP


Description

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Quality Tags

Ontology Terms

 

Bibliography

  1. Bohlmann, J, Crock, J, Jetter, R, Croteau, R; ''Terpenoid-based defenses in conifers: cDNA cloning, characterization, and functional expression of wound-inducible (E)-alpha-bisabolene synthase from grand fir (Abies grandis)''; Proc Natl Acad Sci U S A 95(12);6756-61, 1998 PubMed Europe PMC Scholia
  2. Croteau, R, Johnson, MA; ''Biosynthesis of terpenoid wood extractives''; In Biosynthesis and biodegradation of wood components, ed. T. Higuichi, pp 379-439, 1985
  3. Gijzen, M, Lewinsohn, E, Croteau, R; ''Conifer monoterpenes: biochemistry and bark beetle chemical ecology''; In Bioactive volatile compounds from plants, eds R. Teranishi, R.G. Buttery, H. Sugisawa, pp. 8-22, Washington DC: Am. Chem. Soc., 1993
  4. Trapp, S, Croteau, R; ''Defensive resin biosynthesis in conifers''; Annu Rev Plant Physiol Plant Mol Biol 52;689-724, 2001 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
118752view11:26, 1 June 2021EweitzReverted to version '10:52, 1 June 2021' by Eweitz
118751view11:14, 1 June 2021EweitzModified description
118738view10:52, 1 June 2021EweitzModified description
118730view10:40, 1 June 2021EweitzAdd literature references from MetaCyc, http://pathway.gramene.org/RICE/NEW-IMAGE?type=NIL&object=PWY-5425&redirect=T
118664view16:30, 31 May 2021EweitzReverted to version '15:37, 31 May 2021' by Eweitz
118663view16:13, 31 May 2021EweitzModified description
118662view15:37, 31 May 2021EweitzRefine interaction line positions
118661view15:32, 31 May 2021EweitzAdd alpha-longipinene output, fix graphics
118641view12:02, 31 May 2021EweitzOntology Term : 'metabolic pathway of secondary metabolites' added !
118640view11:59, 31 May 2021EweitzReverted to version '11:35, 31 May 2021' by Eweitz
118639view11:48, 31 May 2021EweitzModified description
118638view11:35, 31 May 2021EweitzModified description
118634view11:31, 31 May 2021EweitzReverted to version '11:19, 31 May 2021' by Eweitz
118631view11:19, 31 May 2021EweitzModified description
118630view11:19, 31 May 2021EweitzReverted to version '10:16, 29 May 2021' by Eweitz
118629view11:05, 31 May 2021EweitzModified description
118613view10:16, 29 May 2021EweitzModified description
118612view10:12, 29 May 2021EweitzModified description
118268view12:09, 26 May 2021EweitzModified title
82033view14:40, 8 September 2015Anweshafixing title, data source, & tagging incomplete pathways
80478view14:47, 25 June 2015AnweshaNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
Metabolite
(E)-alpha-bisaboleneMetaboliteCHEBI:49242 (ChEBI)
(E)-beta-caryophylleneMetaboliteCHEBI:10357 (ChEBI)
FAPPMetaboliteCHEBI:17407 (ChEBI)
PPiMetaboliteCHEBI:29888 (ChEBI)
Terpene synthaseProtein4836390 (Reactome) Converts trans, trans-farnesyl diphosphate into (E)-beta-caryophyllene.
delta-selineneMetaboliteCHEBI:49278 (ChEBI)
gamma-humuleneMetaboliteCHEBI:49290 (ChEBI)
longifoleneMetaboliteCHEBI:6530 (ChEBI)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
(E)-alpha-bisaboleneArrow1121537 (Reactome)
(E)-beta-caryophylleneArrow1120850 (Reactome)
1119759 (Reactome) Trans, trans-farnesyl diphosphate is converted into delta-selinene by enzymatic activity of an unknown gene product.
1120246 (Reactome) Trans, trans-farnesyl diphosphate is converted into alpha-longipinene by enzymatic activity of an unknown gene product.
1120441 (Reactome) Trans, trans-farnesyl diphosphate is converted into longifolene by enzymatic activity of an unknown gene product.
1120850 (Reactome) Trans, trans-farnesyl diphosphate is converted into (E)-beta-caryophyllene by enzymatic activity of terpene synthase.
1120917 (Reactome) Trans, trans-farnesyl diphosphate is converted into gamma-humulene by enzymatic activity of an unknown gene product.
1121537 (Reactome) Trans, trans-farnesyl diphosphate is converted into (E)-alpha-bisabolene by enzymatic activity of an unknown gene product.
Arrow1120246 (Reactome)
FAPP1119759 (Reactome)
FAPP1120246 (Reactome)
FAPP1120441 (Reactome)
FAPP1120850 (Reactome)
FAPP1120917 (Reactome)
FAPP1121537 (Reactome)
PPiArrow1119759 (Reactome)
PPiArrow1120246 (Reactome)
PPiArrow1120441 (Reactome)
PPiArrow1120850 (Reactome)
PPiArrow1120917 (Reactome)
PPiArrow1121537 (Reactome)
Terpene synthasemim-catalysis1120850 (Reactome)
delta-selineneArrow1119759 (Reactome)
gamma-humuleneArrow1120917 (Reactome)
longifoleneArrow1120441 (Reactome)
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