Geranylgeranyldiphosphate biosynthesis II (plastidic) (Oryza sativa)

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plastid stromacytosolIPPPIPPPPPigeranylgeranyldiphosphateFAPPIPPPGPPPPidimethylallyltranstransferaseDMAPP(2E,6E)-farnesyldiphosphate synthasePPi3-phosphoshikimate1-carboxyvinyltransferase


Description

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History

CompareRevisionActionTimeUserComment
123828view12:17, 16 August 2022EgonwOntology Term : 'classic metabolic pathway' added !
118320view12:23, 26 May 2021EweitzModified title
81978view14:38, 8 September 2015Anweshafixing title, data source, & tagging incomplete pathways
80491view14:48, 25 June 2015AnweshaNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
(2E,6E)-farnesyl diphosphate synthaseProtein4789517 (Reactome) Catalyzes the conversion of geranyl-PP into trans,trans-farnesyl diphosphate.
3-phosphoshikimate 1-carboxyvinyltransferaseProtein1122054 (Reactome) Facilitates the conversion of trans,trans-farnesyl diphosphate to geranylgeranyl diphosphate.
DMAPPMetaboliteCHEBI:16057 (ChEBI)
FAPPMetaboliteCHEBI:17407 (ChEBI)
GPPMetaboliteCHEBI:17211 (ChEBI)
IPPPMetaboliteCHEBI:16584 (ChEBI)
PPiMetaboliteCHEBI:29888 (ChEBI)
dimethylallyltranstransferaseProtein3319480 (Reactome) Facilitates the conversion of dimethylallyl-PP to geranyl-PP.
geranylgeranyl diphosphateMetaboliteCHEBI:48861 (ChEBI)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
(2E,6E)-farnesyl diphosphate synthasemim-catalysis4789539 (Reactome)
1120135 (Reactome) Dimethylallyl-PP is converted into geranyl-PP by enzymatic activity of dimethylallyltranstransferase.
1120932 (Reactome) Trans,trans-farnesyl diphosphate is converted to geranylgeranyl diphosphate by enzymatic activity of 3-phosphoshikimate 1-carboxyvinyltransferase.
3-phosphoshikimate 1-carboxyvinyltransferasemim-catalysis1120932 (Reactome)
4789539 (Reactome) Geranyl-PP is converted to trans,trans-farnesyl diphosphate by enzymatic activity of (2E,6E)-farnesyl diphosphate synthase.
DMAPP1120135 (Reactome)
FAPP1120932 (Reactome)
FAPPArrow4789539 (Reactome)
GPP4789539 (Reactome)
GPPArrow1120135 (Reactome)
IPPP1120135 (Reactome)
IPPP1120932 (Reactome)
IPPP4789539 (Reactome)
PPiArrow1120135 (Reactome)
PPiArrow1120932 (Reactome)
PPiArrow4789539 (Reactome)
dimethylallyltranstransferasemim-catalysis1120135 (Reactome)
geranylgeranyl diphosphateArrow1120932 (Reactome)
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