Phytyl-PP biosynthesis (Arabidopsis thaliana)

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This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.<p>Details of projection methods and parameters may be found <a href="/projection.html">here.</a><p>Original Pathway at Reactome: http://www.reactome.org/PathwayBrowser/#DB=gk_current&FOCUS_SPECIES_ID=48887&FOCUS_PATHWAY_ID=5402161</div>

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Ontology Terms

Bibliography

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History

Compare	Revision	Action	Time	User	Comment
	123824	view	12:16, 16 August 2022	Egonw	Ontology Term : 'classic metabolic pathway' added !
	118302	view	12:15, 26 May 2021	Eweitz	Modified title
	82048	view	14:41, 8 September 2015	Anwesha	fixing title, data source, & tagging incomplete pathways
	80514	view	14:49, 25 June 2015	Anwesha	New pathway

External references

DataNodes

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Name	Type	Database reference	Comment
	Metabolite
AT1G74470	Protein	AT1G74470 (TAIR)
NADP+	Metabolite	CHEBI:18009 (ChEBI)
NADPH	Metabolite	CHEBI:16474 (ChEBI)
geranylgeranyl diphosphate	Metabolite	CHEBI:48861 (ChEBI)
phytyl-PP	Metabolite	CHEBI:18187 (ChEBI)

Annotated Interactions

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Source	Target	Type	Database reference	Comment
			5399411 (Reactome)
			5399711 (Reactome)	This event has been computationally inferred from an event that has been demonstrated in another species. The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation. Details of projection methods and parameters may be found here.
			5401249 (Reactome)
AT1G74470		mim-catalysis	5399411 (Reactome)
AT1G74470		mim-catalysis	5399711 (Reactome)
AT1G74470		mim-catalysis	5401249 (Reactome)
		Arrow	5399711 (Reactome)
		Arrow	5401249 (Reactome)
	NADP+	Arrow	5399411 (Reactome)
	NADP+	Arrow	5399711 (Reactome)
	NADP+	Arrow	5401249 (Reactome)
NADPH			5399411 (Reactome)
NADPH			5399711 (Reactome)
NADPH			5401249 (Reactome)
geranylgeranyl diphosphate			5399711 (Reactome)
	phytyl-PP	Arrow	5399411 (Reactome)