Pinobanksin biosynthesis (Oryza sativa)

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Description

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History

Compare	Revision	Action	Time	User	Comment
	118628	view	09:42, 31 May 2021	Finterly	Fixed KEGG Compound linkout
	118305	view	12:15, 26 May 2021	Eweitz	Modified title
	82061	view	14:41, 8 September 2015	Anwesha	fixing title, data source, & tagging incomplete pathways
	80595	view	14:52, 25 June 2015	Anwesha	New pathway

External references

DataNodes

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Name	Type	Database reference	Comment
	Metabolite
(2R,3R)-pinobanksin	Metabolite	C09826 (COMPOUND)
(2S)-pinocembrin	Metabolite	C09827 (COMPOUND)
(E)-cinnamoyl-CoA	Metabolite	CHEBI:10956 (ChEBI)
2OG	Metabolite	CHEBI:30915 (ChEBI)
AdoHcy	Metabolite	CHEBI:16680 (ChEBI)
AdoMet	Metabolite	CHEBI:15414 (ChEBI)
CO2	Metabolite	CHEBI:16526 (ChEBI)
CoA-SH	Metabolite	CHEBI:15346 (ChEBI)
Malonyl-CoA	Metabolite	CHEBI:15531 (ChEBI)
O2	Metabolite	CHEBI:15379 (ChEBI)
SUCCA	Metabolite	CHEBI:15741 (ChEBI)
chalcone isomerase 3	Protein	1121716 (Reactome)	Catalizes the conversion of cinnamoyl-CoA to pinocembrin chalcone
chalcone synthase (LOC_OS07G11440.1)	Protein	Q8H4L3 (Uniprot-TrEMBL)	a putative expresssed chalcone synthase which facilitates the conversion of 4-coumaroyl-CoA to isoliquiritigenin Or the primary product of this enzyme could be 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone)

Annotated Interactions

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Source	Target	Type	Database reference	Comment
	(2R,3R)-pinobanksin	Arrow	1120510 (Reactome)
(2S)-pinocembrin			1119847 (Reactome)
(2S)-pinocembrin			1120510 (Reactome)
	(2S)-pinocembrin	Arrow	1120345 (Reactome)
(E)-cinnamoyl-CoA			1120188 (Reactome)
			1119847 (Reactome)
			1120188 (Reactome)	(E)-cinnamoyl-CoA is converted into pinocembrin chalcone by enzymatic activity of chalcone synthase.
			1120345 (Reactome)
			1120510 (Reactome)	(2S)-pinocembrin is converted into (2R,3R)-pinobanksin by enzymatic activity of flavanone-3-hydroxylase.
2OG			1120510 (Reactome)
	AdoHcy	Arrow	1119847 (Reactome)
AdoMet			1119847 (Reactome)
		Arrow	1119847 (Reactome)
		Arrow	1120188 (Reactome)
	CO2	Arrow	1120188 (Reactome)
	CO2	Arrow	1120510 (Reactome)
	CoA-SH	Arrow	1120188 (Reactome)
Malonyl-CoA			1120188 (Reactome)
O2			1120510 (Reactome)
	SUCCA	Arrow	1120510 (Reactome)
chalcone isomerase 3		mim-catalysis	1120345 (Reactome)
chalcone synthase (LOC_OS07G11440.1)		mim-catalysis	1120188 (Reactome)