Interferon gamma signaling (Homo sapiens)
From WikiPathways
Description
Quality Tags
Ontology Terms
Bibliography
View all... |
- Kotenko SV, Izotova LS, Pollack BP, Mariano TM, Donnelly RJ, Muthukumaran G, Cook JR, Garotta G, Silvennoinen O, Ihle JN.; ''Interaction between the components of the interferon gamma receptor complex.''; PubMed Europe PMC Scholia
- ten Hoeve J, de Jesus Ibarra-Sanchez M, Fu Y, Zhu W, Tremblay M, David M, Shuai K.; ''Identification of a nuclear Stat1 protein tyrosine phosphatase.''; PubMed Europe PMC Scholia
- Martinez FO, Gordon S, Locati M, Mantovani A.; ''Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression.''; PubMed Europe PMC Scholia
- Briscoe J, Rogers NC, Witthuhn BA, Watling D, Harpur AG, Wilks AF, Stark GR, Ihle JN, Kerr IM.; ''Kinase-negative mutants of JAK1 can sustain interferon-gamma-inducible gene expression but not an antiviral state.''; PubMed Europe PMC Scholia
- Aaronson DS, Horvath CM.; ''A road map for those who don't know JAK-STAT.''; PubMed Europe PMC Scholia
- Feng J, Witthuhn BA, Matsuda T, Kohlhuber F, Kerr IM, Ihle JN.; ''Activation of Jak2 catalytic activity requires phosphorylation of Y1007 in the kinase activation loop.''; PubMed Europe PMC Scholia
- Mowen K, David M.; ''Regulation of STAT1 nuclear export by Jak1.''; PubMed Europe PMC Scholia
- Costa-Pereira AP, Hermanns HM, Is'harc H, Williams TM, Watling D, Arulampalam V, Newman SJ, Heinrich PC, Kerr IM.; ''Signaling through a mutant IFN-gamma receptor.''; PubMed Europe PMC Scholia
- Pestka S, Kotenko SV, Muthukumaran G, Izotova LS, Cook JR, Garotta G.; ''The interferon gamma (IFN-gamma) receptor: a paradigm for the multichain cytokine receptor.''; PubMed Europe PMC Scholia
- Strehlow I, Decker T.; ''Transcriptional induction of IFN-gamma-responsive genes is modulated by DNA surrounding the interferon stimulation response element.''; PubMed Europe PMC Scholia
- McBride KM, Reich NC.; ''The ins and outs of STAT1 nuclear transport.''; PubMed Europe PMC Scholia
- Krause CD, Mei E, Xie J, Jia Y, Bopp MA, Hochstrasser RM, Pestka S.; ''Seeing the light: preassembly and ligand-induced changes of the interferon gamma receptor complex in cells.''; PubMed Europe PMC Scholia
- Krause CD, Lavnikova N, Xie J, Mei E, Mirochnitchenko OV, Jia Y, Hochstrasser RM, Pestka S.; ''Preassembly and ligand-induced restructuring of the chains of the IFN-gamma receptor complex: the roles of Jak kinases, Stat1 and the receptor chains.''; PubMed Europe PMC Scholia
- Simoncic PD, Lee-Loy A, Barber DL, Tremblay ML, McGlade CJ.; ''The T cell protein tyrosine phosphatase is a negative regulator of janus family kinases 1 and 3.''; PubMed Europe PMC Scholia
- Bach EA, Aguet M, Schreiber RD.; ''The IFN gamma receptor: a paradigm for cytokine receptor signaling.''; PubMed Europe PMC Scholia
- Ouellet S, Müller E, Rola-Pleszczynski M.; ''IFN-gamma up-regulates platelet-activating factor receptor gene expression in human monocytes.''; PubMed Europe PMC Scholia
- Ealick SE, Cook WJ, Vijay-Kumar S, Carson M, Nagabhushan TL, Trotta PP, Bugg CE.; ''Three-dimensional structure of recombinant human interferon-gamma.''; PubMed Europe PMC Scholia
- Walter MR, Windsor WT, Nagabhushan TL, Lundell DJ, Lunn CA, Zauodny PJ, Narula SK.; ''Crystal structure of a complex between interferon-gamma and its soluble high-affinity receptor.''; PubMed Europe PMC Scholia
- Shuai K, Horvath CM, Huang LH, Qureshi SA, Cowburn D, Darnell JE.; ''Interferon activation of the transcription factor Stat91 involves dimerization through SH2-phosphotyrosyl peptide interactions.''; PubMed Europe PMC Scholia
- Stratowa C, Audette M.; ''Transcriptional regulation of the human intercellular adhesion molecule-1 gene: a short overview.''; PubMed Europe PMC Scholia
- Ungureanu D, Vanhatupa S, Kotaja N, Yang J, Aittomaki S, Jänne OA, Palvimo JJ, Silvennoinen O.; ''PIAS proteins promote SUMO-1 conjugation to STAT1.''; PubMed Europe PMC Scholia
- Rosenman SJ, Shrikant P, Dubb L, Benveniste EN, Ransohoff RM.; ''Cytokine-induced expression of vascular cell adhesion molecule-1 (VCAM-1) by astrocytes and astrocytoma cell lines.''; PubMed Europe PMC Scholia
- Matsuda T, Feng J, Witthuhn BA, Sekine Y, Ihle JN.; ''Determination of the transphosphorylation sites of Jak2 kinase.''; PubMed Europe PMC Scholia
- Sakatsume M, Igarashi K, Winestock KD, Garotta G, Larner AC, Finbloom DS.; ''The Jak kinases differentially associate with the alpha and beta (accessory factor) chains of the interferon gamma receptor to form a functional receptor unit capable of activating STAT transcription factors.''; PubMed Europe PMC Scholia
- Nair JS, DaFonseca CJ, Tjernberg A, Sun W, Darnell JE, Chait BT, Zhang JJ.; ''Requirement of Ca2+ and CaMKII for Stat1 Ser-727 phosphorylation in response to IFN-gamma.''; PubMed Europe PMC Scholia
- Huang F, Xiao H, Sun BL, Yang RG.; ''Characterization of TRIM62 as a RING finger E3 ubiquitin ligase and its subcellular localization.''; PubMed Europe PMC Scholia
- Gough DJ, Levy DE, Johnstone RW, Clarke CJ.; ''IFNgamma signaling-does it mean JAK-STAT?''; PubMed Europe PMC Scholia
- Shuai K, Stark GR, Kerr IM, Darnell JE.; ''A single phosphotyrosine residue of Stat91 required for gene activation by interferon-gamma.''; PubMed Europe PMC Scholia
- Wenta N, Strauss H, Meyer S, Vinkemeier U.; ''Tyrosine phosphorylation regulates the partitioning of STAT1 between different dimer conformations.''; PubMed Europe PMC Scholia
- Quintás-Cardama A, Vaddi K, Liu P, Manshouri T, Li J, Scherle PA, Caulder E, Wen X, Li Y, Waeltz P, Rupar M, Burn T, Lo Y, Kelley J, Covington M, Shepard S, Rodgers JD, Haley P, Kantarjian H, Fridman JS, Verstovsek S.; ''Preclinical characterization of the selective JAK1/2 inhibitor INCB018424: therapeutic implications for the treatment of myeloproliferative neoplasms.''; PubMed Europe PMC Scholia
- Thiel DJ, le Du MH, Walter RL, D'Arcy A, Chène C, Fountoulakis M, Garotta G, Winkler FK, Ealick SE.; ''Observation of an unexpected third receptor molecule in the crystal structure of human interferon-gamma receptor complex.''; PubMed Europe PMC Scholia
- Fountoulakis M, Zulauf M, Lustig A, Garotta G.; ''Stoichiometry of interaction between interferon gamma and its receptor.''; PubMed Europe PMC Scholia
- Fridman JS, Scherle PA, Collins R, Burn TC, Li Y, Li J, Covington MB, Thomas B, Collier P, Favata MF, Wen X, Shi J, McGee R, Haley PJ, Shepard S, Rodgers JD, Yeleswaram S, Hollis G, Newton RC, Metcalf B, Friedman SM, Vaddi K.; ''Selective inhibition of JAK1 and JAK2 is efficacious in rodent models of arthritis: preclinical characterization of INCB028050.''; PubMed Europe PMC Scholia
- Hanan EJ, van Abbema A, Barrett K, Blair WS, Blaney J, Chang C, Eigenbrot C, Flynn S, Gibbons P, Hurley CA, Kenny JR, Kulagowski J, Lee L, Magnuson SR, Morris C, Murray J, Pastor RM, Rawson T, Siu M, Ultsch M, Zhou A, Sampath D, Lyssikatos JP.; ''Discovery of potent and selective pyrazolopyrimidine janus kinase 2 inhibitors.''; PubMed Europe PMC Scholia
- Lew DJ, Decker T, Strehlow I, Darnell JE.; ''Overlapping elements in the guanylate-binding protein gene promoter mediate transcriptional induction by alpha and gamma interferons.''; PubMed Europe PMC Scholia
- Igarashi K, Garotta G, Ozmen L, Ziemiecki A, Wilks AF, Harpur AG, Larner AC, Finbloom DS.; ''Interferon-gamma induces tyrosine phosphorylation of interferon-gamma receptor and regulated association of protein tyrosine kinases, Jak1 and Jak2, with its receptor.''; PubMed Europe PMC Scholia
- Greenlund AC, Morales MO, Viviano BL, Yan H, Krolewski J, Schreiber RD.; ''Stat recruitment by tyrosine-phosphorylated cytokine receptors: an ordered reversible affinity-driven process.''; PubMed Europe PMC Scholia
- Rupper AC, Cardelli JA.; ''Induction of guanylate binding protein 5 by gamma interferon increases susceptibility to Salmonella enterica serovar Typhimurium-induced pyroptosis in RAW 264.7 cells.''; PubMed Europe PMC Scholia
- Kaplan DH, Greenlund AC, Tanner JW, Shaw AS, Schreiber RD.; ''Identification of an interferon-gamma receptor alpha chain sequence required for JAK-1 binding.''; PubMed Europe PMC Scholia
- Liao J, Fu Y, Shuai K.; ''Distinct roles of the NH2- and COOH-terminal domains of the protein inhibitor of activated signal transducer and activator of transcription (STAT) 1 (PIAS1) in cytokine-induced PIAS1-Stat1 interaction.''; PubMed Europe PMC Scholia
- Pearse RN, Feinman R, Shuai K, Darnell JE, Ravetch JV.; ''Interferon gamma-induced transcription of the high-affinity Fc receptor for IgG requires assembly of a complex that includes the 91-kDa subunit of transcription factor ISGF3.''; PubMed Europe PMC Scholia
- Decker T, Lew DJ, Mirkovitch J, Darnell JE.; ''Cytoplasmic activation of GAF, an IFN-gamma-regulated DNA-binding factor.''; PubMed Europe PMC Scholia
- Palvimo JJ.; ''PIAS proteins as regulators of small ubiquitin-related modifier (SUMO) modifications and transcription.''; PubMed Europe PMC Scholia
- Yasukawa H, Misawa H, Sakamoto H, Masuhara M, Sasaki A, Wakioka T, Ohtsuka S, Imaizumi T, Matsuda T, Ihle JN, Yoshimura A.; ''The JAK-binding protein JAB inhibits Janus tyrosine kinase activity through binding in the activation loop.''; PubMed Europe PMC Scholia
- Boehm U, Klamp T, Groot M, Howard JC.; ''Cellular responses to interferon-gamma.''; PubMed Europe PMC Scholia
- Quelle FW, Thierfelder W, Witthuhn BA, Tang B, Cohen S, Ihle JN.; ''Phosphorylation and activation of the DNA binding activity of purified Stat1 by the Janus protein-tyrosine kinases and the epidermal growth factor receptor.''; PubMed Europe PMC Scholia
- Sasaki A, Yasukawa H, Suzuki A, Kamizono S, Syoda T, Kinjyo I, Sasaki M, Johnston JA, Yoshimura A.; ''Cytokine-inducible SH2 protein-3 (CIS3/SOCS3) inhibits Janus tyrosine kinase by binding through the N-terminal kinase inhibitory region as well as SH2 domain.''; PubMed Europe PMC Scholia
- Ozato K, Shin DM, Chang TH, Morse HC.; ''TRIM family proteins and their emerging roles in innate immunity.''; PubMed Europe PMC Scholia
- DeVries TA, Kalkofen RL, Matassa AA, Reyland ME.; ''Protein kinase Cdelta regulates apoptosis via activation of STAT1.''; PubMed Europe PMC Scholia
- Rajsbaum R, Stoye JP, O'Garra A.; ''Type I interferon-dependent and -independent expression of tripartite motif proteins in immune cells.''; PubMed Europe PMC Scholia
- Greenlund AC, Farrar MA, Viviano BL, Schreiber RD.; ''Ligand-induced IFN gamma receptor tyrosine phosphorylation couples the receptor to its signal transduction system (p91).''; PubMed Europe PMC Scholia
- Shuai K, Schindler C, Prezioso VR, Darnell JE.; ''Activation of transcription by IFN-gamma: tyrosine phosphorylation of a 91-kD DNA binding protein.''; PubMed Europe PMC Scholia
- Schroder K, Hertzog PJ, Ravasi T, Hume DA.; ''Interferon-gamma: an overview of signals, mechanisms and functions.''; PubMed Europe PMC Scholia
- Argetsinger LS, Kouadio JL, Steen H, Stensballe A, Jensen ON, Carter-Su C.; ''Autophosphorylation of JAK2 on tyrosines 221 and 570 regulates its activity.''; PubMed Europe PMC Scholia
- Argetsinger LS, Stuckey JA, Robertson SA, Koleva RI, Cline JM, Marto JA, Myers MG, Carter-Su C.; ''Tyrosines 868, 966, and 972 in the kinase domain of JAK2 are autophosphorylated and required for maximal JAK2 kinase activity.''; PubMed Europe PMC Scholia
- Clark JD, Flanagan ME, Telliez JB.; ''Discovery and development of Janus kinase (JAK) inhibitors for inflammatory diseases.''; PubMed Europe PMC Scholia
History
View all... |
External references
DataNodes
View all... |
Name | Type | Database reference | Comment |
---|---|---|---|
ADP | Metabolite | CHEBI:16761 (ChEBI) | |
ATP | Metabolite | CHEBI:15422 (ChEBI) | |
B2M(21-119) | Protein | P61769 (Uniprot-TrEMBL) | |
CIITA | Protein | P33076 (Uniprot-TrEMBL) | |
CaMKII and PKC-delta | R-HSA-909568 (Reactome) | ||
Class I MHC heavy chain (MHC HC) | R-HSA-983117 (Reactome) | ||
FCGRA | R-HSA-1031694 (Reactome) | ||
GAF bound to GAS promoter element | Complex | R-HSA-1031710 (Reactome) | |
GAS promoter region
in IFNG-regulated genes | R-NUL-1031708 (Reactome) | ||
GBP | R-HSA-1031695 (Reactome) | ||
H2O | Metabolite | CHEBI:15377 (ChEBI) | |
HLA class II
histocompatibility antigen, DP | Protein | P04440 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DP alpha chain precursor | Protein | P20036 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DQ | Protein | P01906 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DQ | Protein | P01909 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DQ | Protein | P01920 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DQ beta 2 chain | Protein | P05538 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DQB1*0602 beta chain precursor | Protein | P01920 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DR alpha chain precursor | Protein | P01903 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DR beta 4 chain | Protein | P13762 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DR beta 5 chain | Protein | Q30154 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DR-1 beta chain precursor | Protein | P01912 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-1 beta chain | Protein | P04229 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-10 beta chain | Protein | Q30167 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-11 beta chain | Protein | P20039 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-12 beta chain | Protein | Q95IE3 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-13 beta chain | Protein | Q5Y7A7 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-14 beta chain | Protein | Q9GIY3 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-15 beta chain | Protein | P01911 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-16 beta chain | Protein | Q29974 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-4 beta chain | Protein | P13760 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-7 beta chain | Protein | P13761 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-8 beta chain | Protein | Q30134 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB1-9 beta chain precursor | Protein | Q9TQE0 (Uniprot-TrEMBL) | |
HLA class II
histocompatibility antigen, DRB3-1 beta chain precursor | Protein | P79483 (Uniprot-TrEMBL) | |
IFI30 | Protein | P13284 (Uniprot-TrEMBL) | |
IFN-gamma upregulated CAMs | R-HSA-1031690 (Reactome) | ||
IFNG | Protein | P01579 (Uniprot-TrEMBL) | |
IFNG homodimer | Complex | R-HSA-873823 (Reactome) | |
IFNG-activated factor (GAF) | Complex | R-HSA-873824 (Reactome) | |
IFNG-activated factor (GAF) | Complex | R-HSA-873827 (Reactome) | |
IFNG:IFNGR1:JAK1:IFNGR2:JAK2 | Complex | R-HSA-873829 (Reactome) | |
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2:SOCS-1/-3 | Complex | R-HSA-873821 (Reactome) | |
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2 | Complex | R-HSA-873811 (Reactome) | |
IFNG:IFNGR1:p-JAK1:IFNGR2:p-JAK2 | Complex | R-HSA-873820 (Reactome) | |
IFNG:p-IFNGR1:p-JAK1:IFNGR2:p-JAK2 | Complex | R-HSA-873814 (Reactome) | |
IFNGR1 | Protein | P15260 (Uniprot-TrEMBL) | |
IFNGR1:JAK1:INFG2:JAK2 | Complex | R-HSA-873810 (Reactome) | |
IFNGR2 | Protein | P38484 (Uniprot-TrEMBL) | |
INFG induced TRIMs | R-HSA-5624346 (Reactome) | ||
IRF 1-9 | R-HSA-1015695 (Reactome) | ||
JAK1 | Protein | P23458 (Uniprot-TrEMBL) | |
JAK2 | Protein | O60674 (Uniprot-TrEMBL) | |
MHC class II alpha/beta dimer | Complex | R-HSA-2213189 (Reactome) | |
MT2A | Protein | P02795 (Uniprot-TrEMBL) | |
OAS proteins | R-HSA-1015696 (Reactome) | ||
PIAS1 | Protein | O75925 (Uniprot-TrEMBL) | |
PIAS1 | Protein | O75925 (Uniprot-TrEMBL) | |
PML | Protein | P29590 (Uniprot-TrEMBL) | |
PTAFR | Protein | P25105 (Uniprot-TrEMBL) | |
PTPN1 | Protein | P18031 (Uniprot-TrEMBL) | |
PTPN2-1 | Protein | P17706-2 (Uniprot-TrEMBL) | |
PTPN6 | Protein | P29350 (Uniprot-TrEMBL) | |
PTPs-SHP1/2/PTP1B | R-HSA-997298 (Reactome) | ||
Pi | Metabolite | CHEBI:18367 (ChEBI) | |
SOCS-1 and SOCS-3 | R-HSA-877267 (Reactome) | ||
SOCS1 | Protein | O15524 (Uniprot-TrEMBL) | |
SOCS3 | Protein | O14543 (Uniprot-TrEMBL) | |
SP100 | Protein | P23497 (Uniprot-TrEMBL) | |
STAT1 bound to p-IFNGR1 | Complex | R-HSA-873828 (Reactome) | |
STAT1-1 | Protein | P42224-1 (Uniprot-TrEMBL) | |
STAT1-1 | Protein | P42224-1 (Uniprot-TrEMBL) | |
SUMO1 | Protein | P63165 (Uniprot-TrEMBL) | |
SUMO1 | Protein | P63165 (Uniprot-TrEMBL) | |
p-S727,Y701-STAT1-1 | Protein | P42224-1 (Uniprot-TrEMBL) | |
p-STAT1 dimer:PIAS:SUMO1 | Complex | R-HSA-877297 (Reactome) | |
p-STAT1 dimer bound to p-IFNGR1 | Complex | R-HSA-909556 (Reactome) | |
p-STAT1(Y701) bound to p-IFNGR1 | Complex | R-HSA-873817 (Reactome) | |
p-Y-JAK1 | Protein | P23458 (Uniprot-TrEMBL) | |
p-Y1007-JAK2 | Protein | O60674 (Uniprot-TrEMBL) | |
p-Y440-IFNGR1 | Protein | P15260 (Uniprot-TrEMBL) | |
p-Y701-STAT1-1 | Protein | P42224-1 (Uniprot-TrEMBL) |
Annotated Interactions
View all... |
Source | Target | Type | Database reference | Comment |
---|---|---|---|---|
ADP | Arrow | R-HSA-873918 (Reactome) | ||
ADP | Arrow | R-HSA-873919 (Reactome) | ||
ADP | Arrow | R-HSA-873922 (Reactome) | ||
ADP | Arrow | R-HSA-873924 (Reactome) | ||
ADP | Arrow | R-HSA-909552 (Reactome) | ||
ATP | R-HSA-873918 (Reactome) | |||
ATP | R-HSA-873919 (Reactome) | |||
ATP | R-HSA-873922 (Reactome) | |||
ATP | R-HSA-873924 (Reactome) | |||
ATP | R-HSA-909552 (Reactome) | |||
B2M(21-119) | Arrow | R-HSA-1031716 (Reactome) | ||
CIITA | Arrow | R-HSA-1031716 (Reactome) | ||
CaMKII and PKC-delta | mim-catalysis | R-HSA-909552 (Reactome) | ||
Class I MHC heavy chain (MHC HC) | Arrow | R-HSA-1031716 (Reactome) | ||
FCGRA | Arrow | R-HSA-1031716 (Reactome) | ||
GAF bound to GAS promoter element | Arrow | R-HSA-1031713 (Reactome) | ||
GAF bound to GAS promoter element | Arrow | R-HSA-1031716 (Reactome) | ||
GAS promoter region
in IFNG-regulated genes | R-HSA-1031713 (Reactome) | |||
GBP | Arrow | R-HSA-1031716 (Reactome) | ||
H2O | R-HSA-877308 (Reactome) | |||
H2O | R-HSA-997326 (Reactome) | |||
IFI30 | Arrow | R-HSA-1031716 (Reactome) | ||
IFN-gamma upregulated CAMs | Arrow | R-HSA-1031716 (Reactome) | ||
IFNG homodimer | R-HSA-873926 (Reactome) | |||
IFNG-activated factor (GAF) | Arrow | R-HSA-873917 (Reactome) | ||
IFNG-activated factor (GAF) | Arrow | R-HSA-873927 (Reactome) | ||
IFNG-activated factor (GAF) | R-HSA-1031713 (Reactome) | |||
IFNG-activated factor (GAF) | R-HSA-873917 (Reactome) | |||
IFNG-activated factor (GAF) | R-HSA-877281 (Reactome) | |||
IFNG-activated factor (GAF) | R-HSA-997326 (Reactome) | |||
IFNG:IFNGR1:JAK1:IFNGR2:JAK2 | Arrow | R-HSA-873926 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:JAK2 | Arrow | R-HSA-877308 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:JAK2 | R-HSA-873919 (Reactome) | |||
IFNG:IFNGR1:JAK1:IFNGR2:JAK2 | mim-catalysis | R-HSA-873919 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2:SOCS-1/-3 | Arrow | R-HSA-877269 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2:SOCS-1/-3 | TBar | R-HSA-873918 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2 | Arrow | R-HSA-873919 (Reactome) | ||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2 | R-HSA-873918 (Reactome) | |||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2 | R-HSA-877269 (Reactome) | |||
IFNG:IFNGR1:JAK1:IFNGR2:p-JAK2 | mim-catalysis | R-HSA-873918 (Reactome) | ||
IFNG:IFNGR1:p-JAK1:IFNGR2:p-JAK2 | Arrow | R-HSA-873918 (Reactome) | ||
IFNG:IFNGR1:p-JAK1:IFNGR2:p-JAK2 | R-HSA-873924 (Reactome) | |||
IFNG:IFNGR1:p-JAK1:IFNGR2:p-JAK2 | R-HSA-877308 (Reactome) | |||
IFNG:IFNGR1:p-JAK1:IFNGR2:p-JAK2 | mim-catalysis | R-HSA-873924 (Reactome) | ||
IFNG:p-IFNGR1:p-JAK1:IFNGR2:p-JAK2 | Arrow | R-HSA-873924 (Reactome) | ||
IFNG:p-IFNGR1:p-JAK1:IFNGR2:p-JAK2 | Arrow | R-HSA-873927 (Reactome) | ||
IFNG:p-IFNGR1:p-JAK1:IFNGR2:p-JAK2 | R-HSA-873921 (Reactome) | |||
IFNGR1:JAK1:INFG2:JAK2 | R-HSA-873926 (Reactome) | |||
INFG induced TRIMs | Arrow | R-HSA-1031716 (Reactome) | ||
IRF 1-9 | Arrow | R-HSA-1031716 (Reactome) | ||
MHC class II alpha/beta dimer | Arrow | R-HSA-1031716 (Reactome) | ||
MT2A | Arrow | R-HSA-1031716 (Reactome) | ||
OAS proteins | Arrow | R-HSA-1031716 (Reactome) | ||
PIAS1 | R-HSA-877281 (Reactome) | |||
PML | Arrow | R-HSA-1031716 (Reactome) | ||
PTAFR | Arrow | R-HSA-1031716 (Reactome) | ||
PTPN2-1 | mim-catalysis | R-HSA-997326 (Reactome) | ||
PTPs-SHP1/2/PTP1B | mim-catalysis | R-HSA-877308 (Reactome) | ||
Pi | Arrow | R-HSA-877308 (Reactome) | ||
Pi | Arrow | R-HSA-997326 (Reactome) | ||
R-HSA-1031713 (Reactome) | GAF transcription factor translocated into nucleus binds to defined DNA sequence called GAS (gamma activated sequence) elements in the promoters of IFN-gamma responsive elements and initiate transcription. | |||
R-HSA-1031716 (Reactome) | IFN-gamma stimulates gene expression of about 200 genes which include the primary response genes like IRFs, Fc-gamma receptor (FCGR), GBPs (guanylate-binding proteins) and also major histocompatibility complex (MHC) class I and class II molecules, proteins involved in antigen presentation, antiviral proteins like PKR, OAS proteins etc. A wonderful list of most of the IFN-gamma inducible proteins with corresponding literature are mentioned in the review article and the supplementary document by Boehm et al 1997. | |||
R-HSA-873917 (Reactome) | Released GAF complex translocates to the nucleus and binds to the gamma-activated sequence (GAS) element present in the promoters of IFNG-regulated genes and induces the transcription of IFNG-responsive genes. | |||
R-HSA-873918 (Reactome) | The initial phosphorylation of JAK1 and JAK2 is mediated by JAK2. Autophosphorylated JAK2 may transphopshorylate JAK1 bound to IFNGR1 chain. Tyrosine 1033 in the activation loop of the JAK1 kinase domain may be the target for transphosphorylation (phosphorylation site mentioned here is based on sequence similarity with all the other JAK kinases). | |||
R-HSA-873919 (Reactome) | IFN-gamma binding to the receptor complex, induces JAK2 autophosphorylation and activation. Like all protein tyrosine kinases (PTKs) JAK2 activity also depends on the phosphorylation of tandem tyrosine residues within the activation loop that results in the removal of the activation loop from the active site. Multiple phosphorylation sites have been identified in JAK2 (tyrosines 221, 570, 868, 966, 972, 1007 and 1008 ) of which phosphorylation of tyrosine 1007 is essential for kinase activity. Tyrosine 1007 is in the activation loop and phosphorylation allows access of the catalytic loop to the ATP in the ATP binding domain. Of all the predicted phoshorylation sites only tyrosine 1007 is represented in the reaction. | |||
R-HSA-873921 (Reactome) | The phosphorylated tyrosine residue 440 in the 440YDKPH444 motif on IFNGR1 chain serves as a docking site and recruits STAT1, an SH2 domain-containing transcription factor to the functional receptor unit. | |||
R-HSA-873922 (Reactome) | STAT1 pair recruited to the receptor complex is phosphorylated near the C-terminus at residue Y701, probably by JAK2. This phosphorylation enables the STAT1 homodimer formation which is further phosphorylated on residue S727. | |||
R-HSA-873924 (Reactome) | The phosphorylated active JAK1 kinase inturn phosphorylates tyrosine residue 440 on each of the IFNGR1 chains to form two adjacent docking sites for the latent STAT1 SH2 domains. | |||
R-HSA-873926 (Reactome) | The IFNG receptor complex is a pre-assembled entity, as constitutive interactions are seen between IFNGR1 and IFNGR2, and between two IFNGR2 chains in the absence of ligand IFNG. JAK1 and JAK2 constitutively associate with the intracellular domains of the subunits of the IFNG receptor complex, providing it with tyrosine kinase activity. In unstimulated cells JAK1 preferentially associates with IFNGR1 and while JAK2 associates with IFNGR2 chains. JAK1 enhances the interaction between IFNGR1 and IFNGR2 chains, and thus has a major role in the pre-assembly of the IFNGR complex, in contrast the kinase activity of JAK2 is required to observe any signaling by IFNG. IFNG binds directly to both the receptor chains IFNGR1 and IFNGR2. IFNGR1 is a high affinity receptor and binds directly to IFNG whereas IFNGR2 binds to IFNG in presence of IFNGR1. According to Krause et al. model IFNG binds to IFNGR1 chains first and then IFNGR2 chains interact with the IFNGR1:IFNG:IFNGR1 complex. | |||
R-HSA-873927 (Reactome) | The phosphorylated STAT1 on IFNGR1 chains homodimerize through reciprocal SH2-phosphotyrosine interactions to form p-STAT1 homodimer called gamma-activated-factor (GAF). This phosphorylated STAT1 homodimer disassociates from the receptor complex and translocates to the nucleus. | |||
R-HSA-877269 (Reactome) | SOCS-1 and SOCS-3 coprecipitates with JAK kinases upon IFNG stimulation and are able to inhibit the JAK-STAT pathway, although with different affinity and kinetics. SOCS1 and SOCS3 binds to phosphorylated JAK1/2 and prevent the tyrosine kinase activity of JAKs through their kinase inhibitory region (KIR), thereby inhibiting downstream IFNG signaling. SOCS1 may also prevent IFNG signaling by targeting the signaling machinery to ubiquitin-proteasomal degradation pathway. | |||
R-HSA-877281 (Reactome) | PIAS1 protein interacts directly with phoshorylated STAT1 dimers and inhibit the transcriptional activity of STAT1 by blocking the DNA-binding domain of STAT1. It has also been suggested that PIAS proteins might regulate transcription by promoting small ubiquitin-related modifier (SUMO1) conjugation of STAT1. The significance of STAT1 sumoylation in regulating STAT1 activity is controversial and needs to be clarified. | |||
R-HSA-877308 (Reactome) | Protein tyrosine phosphatases (PTPs) SHP1 and SHP2 down regulate the IFNG signaling by dephosphorylating the tyrosine residues critical to the activation of JAK kinases. PTP1B interacts directly with JAK2 but not JAK1 and dephosphorylate the tyrosine Y1007 on JAK2. | |||
R-HSA-909552 (Reactome) | Kinases like Protein kinase C delta (PKC-delta) and Calcium/calmodulin-dependent protein kinase II (CaMK II ) can phosphorylate STAT1 at serine 727 (S727). This phosphorylation is not required for STAT1 homodimer formation, nuclear translocation and DNA binding. However, it is essential for the full transcriptional activation of STAT1. | |||
R-HSA-997326 (Reactome) | The nuclear isoform of T cell protein tyrosine phosphatase (TC-PTP) referred as TC45 (or TC-PTPa) dephosphorylates p-STAT1 dimer in the nucleus. It can also dephosphorylate p-JAK1/3 in IFNG stimulated cells. | |||
SOCS-1 and SOCS-3 | R-HSA-877269 (Reactome) | |||
SP100 | Arrow | R-HSA-1031716 (Reactome) | ||
STAT1 bound to p-IFNGR1 | Arrow | R-HSA-873921 (Reactome) | ||
STAT1 bound to p-IFNGR1 | R-HSA-873922 (Reactome) | |||
STAT1 bound to p-IFNGR1 | mim-catalysis | R-HSA-873922 (Reactome) | ||
STAT1-1 | Arrow | R-HSA-997326 (Reactome) | ||
STAT1-1 | R-HSA-873921 (Reactome) | |||
SUMO1 | R-HSA-877281 (Reactome) | |||
TBar | R-HSA-873918 (Reactome) | |||
p-STAT1 dimer:PIAS:SUMO1 | Arrow | R-HSA-877281 (Reactome) | ||
p-STAT1 dimer bound to p-IFNGR1 | Arrow | R-HSA-909552 (Reactome) | ||
p-STAT1 dimer bound to p-IFNGR1 | R-HSA-873927 (Reactome) | |||
p-STAT1(Y701) bound to p-IFNGR1 | Arrow | R-HSA-873922 (Reactome) | ||
p-STAT1(Y701) bound to p-IFNGR1 | R-HSA-909552 (Reactome) |