Selenoamino acid metabolism (Homo sapiens)

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173323, 26, 34531396, 1033311314, 18, 2221, 2925, 3019, 24320284, 7, 165312812, 273611, 3221, 294, 7, 1618, 201321, 252, 3537cytosolRPL26L1 RPL8 RPSA RPS26 TXNRD1 RPS15 RPS27 GSSebGalNacRPS6 RPL6 RPS14 RPL30 PXLP H2ORPLP0 H+RPL4 SCLY dimer:PXLPRPS14 SeHCysRPL37A RPSA RPS3 RPS5 RPS7 RPS6 RPL38 CTH tetramer:PXLPL-Ala5S rRNA SECISBP2 RPL35A 2OBUTAH2OSecRPL18 RPL32 NH3RPS11 RPS20 RPL39 PPiRPL7 HSeMTRPS8 RPL11 RPL26L1 2OBUTARPL36A RPL6 H2ORPL10 RPS12 ATPRPS19 RPL23A FAU RPS5 Sec RPS15A 5.8S rRNA MeSebGalNacH2ORPL34 reduced acceptorPiSEPSECStetramer:PXLPRPL3L RPS19 H2OAMPLARS RPL5 H+RPS24 RPS13 RPL36A TXNRD1 Sec-tRNA(Sec) PAPSS1,2RPL9 GSHAdoMetPiMetTrans(1)RPLP1 MAT1A multimersRPS15 RPL12 NADP+RPL15 RPL23 RPL3 RPS4X GSSGCeruloplasmin mRNA RPL21 RPS2 RPL35 RPS4X RPL40 RPL11 NADPHQARS RPL39 AdoMetRPLP2 RARS Me2SeRPL5 RPL26L1 H+RPS17 18S rRNA RPL27 MeHist,N1MNA,MeGlyRPL18A RPL18A pyruvic acidAdoHcyRPS27 RPL19 RPL22 MAT1A RPL31 RPL7A RPS16 RPS27 PXLP RPL27A RPL23 SeCystaRPL30 H2ORPL23A RPL34 H+L-SerRPL3L H2OATPMeSeHMTRPS6 RPS21 RPL31 CTH MNA RPS13 NH3PPiAMPRPL17 AIMP2 FAD RPS25 SARS H2OSEPSECS H2SeSCLY RPL39 APSeRPL31 CTH tetramer:PXLP5S rRNA SECISBP2RPL32 RPL27 RPLP1 RPL14 RPS10 RPS27A(77-156) RPL18A Met-tRNAi RPL24 RPL10A GSHRPS28 RPS2 RPS12 RPL7A AdoHcyRPS14 bGalNAc derivative2-acetamidoglucalRPL26 PAPSS2 FAD RPL10A RPL15 RPS7 NADP+RPS21 RPL41 EEFSEC:GTPSec-tRNA(Sec)Ser-tRNA(Sec)RPLP0 RPS20 RPS8 PAPSS1 RPS16 RPS25 H2OPAPCTH PAPSS1 PAPSS2 K+ RPL41 GNMT RPS24 RPL36A ATPRPS21 Hist NNMT RPL38 H2ORPS8 GSHMg2+ H3SePO3RPS18 RPL38 GDP RPL29 EEFSEC:GDPAdoHcyRPS28 GSR-2 Gly PSTK PXLP GTP RPL29 GSR-2:FAD dimerHist,NAM,GlyH+PXLP-CBS PPiRPLP2 RPL21 acceptorRPS26 AIMP1(1-312) Ceruloplasmin mRNA GSSGRPL28 RPS9 PAPSS1,2RPS20 EPRS GSSeSG5.8S rRNA Sep-tRNA(Sec)RPL8 NADPHEEFSEC RPL3 RPS23 RPS10 RPS3 RPL35 bGalNAcEEF1E1 RPLP0 28S rRNA 5.8S rRNA RPL29 RPS5 DARS Me3Se+RPL21 tRNA(Sec)RPL12 H+Sec-tRNA(Sec) RPLP1 GTP MSDMRPS4Y1 SeMetRPS17 80S:Met-tRNAi:mRNA:SECISBP2:SecRPL37 MARS H2ORPL13 RPL4 28S rRNA ATPMeSeHMeSeOHRPS12 TNXRD1:FAD dimerRPL9 80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPRPL19 RPL13 RPL22 SeMet-tRNA(Met)tRNA(Met)RPL4 RPS26 RPL17 ADP18S rRNA FAU RPL12 aminoacyl-tRNAsynthetasemultienzyme complexRPS23 SeO3(2-)RPS9 RPL18 RPL3L AdeSeHCysRPL19 TXNRD1 ADPTNXRD1:FAD dimerRPS29 RPL37 RPS11 Sec-tRNA(Sec):EEFSEC:GTPAdoSeMetEEFSEC RPL37 RPS18 RPL30 RPL13A RPL14 RPL27 ATPRPL27A RPL7A MeSeO2HIARS GSHRPL28 RPSA heme RPL35A RPS4X Met-tRNAi RPL26 NADP+RPL26 5S rRNA NADPHRPS9 RPL13A RPS15A RPL36 Ade-RibRPS7 RPL34 PXLP Ceruloplasmin mRNA PPiRPL10A RPL23A GSSeHH2SeO4RPL37A RPL35A RPL10 RPS10 NADP+RPL35 RPS17 RPL13 PSTK:Mg2+Met-tRNAi RPL40 RPL10 RPL37A RPLP2 RPL24 RPL27A RPS29 RPL15 PAPSeNADPHL-SerSARC RPS2 RPS24 RPS29 RPS27A(77-156) RPS28 RPL14 AdoMetRPL7 RPS3A RPS23 RPL8 AdoHcyRPS16 MeSecMeHist EEFSEC FAD HNMT Mg2+ RPL23 AHCYRPL9 RPS19 RPS25 SECISBP2 RPS18 NADP+TNXRD1:FAD dimerH2ORPS3A EEFSEC H3PO4RPL7 RPL32 RPS27A(77-156) RPL22 RPS3 RPS4Y1 H2OPAPSeRINMTGTP FAU RPL28 RPL13A KARS RPS13 MeOHRPL41 RPS3A RPL11 28S rRNA RPL3 RPL6 RPS15 CBS tetramerRPS11 NAM RPS4Y1 SARS dimerATP18S rRNA RPL36 RPL17 RPL40 RPL5 RPS15A NADPHRPL24 FAD RPL18 80S:Met-tRNAi:mRNARPL36 15


Description

Selenium (Se) is a trace element essential for the normal function of the body. Selenoamino acids are defined as those amino acids where selenium has been substituted for sulphur. Selenium and sulphur share many chemical properties and so the substitution of normal amino acids with selenoamino acids has little effect on protein structure and function. Both inorganic (selenite, SeO3(2-); and selenate, SeO4(2-)) and organic (selenocysteine, Sec; and selenomethionine, SeMet) forms of selenium can be introduced in the diet where they are transformed into the intermediate selenide (Se(2-)) and then utilized for the de novo synthesis of Sec through a phosphorylated intermediate in a tRNA-dependent fashion. The final step of Sec formation is catalyzed by O-phosphoseryl-tRNA:selenocysteinyl-tRNA synthase (SEPSECS) that converts phosphoseryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec).

All nutritional selenium is metabolised into selenide directly or through methylselenol (MeSeH). Sec liberated from selenoproteins is transformed to Se(2-) by selenocysteine lyase (SCLY). SeMet liberated from general proteins and from free SeMet sources is transformed into Se(2-) either through MeSeH by cystathionine gamma-lyase (CTH) followed by demethylation (SeMet to CH3SeH to H2Se), or through Sec by SCLY after the trans-selenation pathway (SeMet to Sec to H2Se). MeSec is hydrolysed into MeSeH by CTH. Methylseleninic acid (MeSeO2H) is reduced to methylselenol. MeSeH is demethylated to Se(2-) for further utilization for selenoprotein synthesis or oxidised to selenite (SeO3(2-)) for excretion in the form of selenosugar. Additionally, MeSeH is further methylated to dimethylselenide (Me2Se) and trimethylselenonium (Me3Se+) for excretion. View original pathway at:Reactome.

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Bibliography

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History

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CompareRevisionActionTimeUserComment
114774view16:26, 25 January 2021ReactomeTeamReactome version 75
113218view11:28, 2 November 2020ReactomeTeamReactome version 74
112442view15:38, 9 October 2020ReactomeTeamReactome version 73
101347view11:23, 1 November 2018ReactomeTeamreactome version 66
100885view20:57, 31 October 2018ReactomeTeamreactome version 65
100426view19:31, 31 October 2018ReactomeTeamreactome version 64
99976view16:15, 31 October 2018ReactomeTeamreactome version 63
99530view14:51, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99168view12:42, 31 October 2018ReactomeTeamreactome version 62
93759view13:34, 16 August 2017ReactomeTeamreactome version 61
93281view11:19, 9 August 2017ReactomeTeamreactome version 61
87653view08:55, 25 July 2016LindarieswijkOntology Term : 'selenoamino acid metabolic pathway' added !
86360view09:16, 11 July 2016ReactomeTeamNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
18S rRNA ProteinX03205 (EMBL)
2-acetamidoglucalMetaboliteCHEBI:73979 (ChEBI)
28S rRNA ProteinM11167 (EMBL)
2OBUTAMetaboliteCHEBI:30831 (ChEBI)
5.8S rRNA ProteinJ01866 (EMBL)
5S rRNA ProteinV00589 (EMBL)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPComplexR-HSA-5359044 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:SecComplexR-HSA-5359053 (Reactome)
80S:Met-tRNAi:mRNAComplexR-HSA-72505 (Reactome)
ADPMetaboliteCHEBI:16761 (ChEBI)
AHCYProteinP23526 (Uniprot-TrEMBL)
AIMP1(1-312) ProteinQ12904 (Uniprot-TrEMBL)
AIMP2 ProteinQ13155 (Uniprot-TrEMBL)
AMPMetaboliteCHEBI:16027 (ChEBI)
APSeMetaboliteCHEBI:2485 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
Ade-RibMetaboliteCHEBI:16335 (ChEBI)
AdeSeHCysMetaboliteCHEBI:77028 (ChEBI)
AdoHcyMetaboliteCHEBI:16680 (ChEBI)
AdoMetMetaboliteCHEBI:15414 (ChEBI)
AdoSeMetMetaboliteCHEBI:9066 (ChEBI)
CBS tetramerComplexR-HSA-1614610 (Reactome)
CTH ProteinP32929 (Uniprot-TrEMBL)
CTH tetramer:PXLPComplexR-HSA-1625212 (Reactome)
Ceruloplasmin mRNA ProteinM13699 (EMBL)
DARS ProteinP14868 (Uniprot-TrEMBL)
EEF1E1 ProteinO43324 (Uniprot-TrEMBL)
EEFSEC ProteinP57772 (Uniprot-TrEMBL)
EEFSEC:GDPComplexR-HSA-5359051 (Reactome)
EEFSEC:GTPComplexR-HSA-5359045 (Reactome)
EPRS ProteinP07814 (Uniprot-TrEMBL)
FAD MetaboliteCHEBI:16238 (ChEBI)
FAU ProteinP62861 (Uniprot-TrEMBL)
GDP MetaboliteCHEBI:17552 (ChEBI)
GNMT ProteinQ14749 (Uniprot-TrEMBL)
GSHMetaboliteCHEBI:16856 (ChEBI)
GSR-2 ProteinP00390-2 (Uniprot-TrEMBL)
GSR-2:FAD dimerComplexR-HSA-71680 (Reactome)
GSSGMetaboliteCHEBI:17858 (ChEBI)
GSSeHMetaboliteCHEBI:64729 (ChEBI)
GSSeSGMetaboliteCHEBI:26634 (ChEBI)
GSSebGalNacMetaboliteCHEBI:77008 (ChEBI)
GTP MetaboliteCHEBI:15996 (ChEBI)
Gly MetaboliteCHEBI:15428 (ChEBI)
H+MetaboliteCHEBI:15378 (ChEBI)
H2OMetaboliteCHEBI:15377 (ChEBI)
H2SeMetaboliteCHEBI:16503 (ChEBI)
H2SeO4MetaboliteCHEBI:18170 (ChEBI)
H3PO4MetaboliteCHEBI:26078 (ChEBI)
H3SePO3MetaboliteCHEBI:64331 (ChEBI)
HNMT ProteinP50135 (Uniprot-TrEMBL)
HSeMTR-HSA-5359039 (Reactome)
Hist MetaboliteCHEBI:18295 (ChEBI)
Hist,NAM,GlyComplexR-ALL-5359033 (Reactome)
IARS ProteinP41252 (Uniprot-TrEMBL)
INMTProteinO95050 (Uniprot-TrEMBL)
K+ MetaboliteCHEBI:29103 (ChEBI)
KARS ProteinQ15046 (Uniprot-TrEMBL)
L-AlaMetaboliteCHEBI:16977 (ChEBI)
L-SerMetaboliteCHEBI:17115 (ChEBI)
LARS ProteinQ9P2J5 (Uniprot-TrEMBL)
MARS ProteinP56192 (Uniprot-TrEMBL)
MAT1A ProteinQ00266 (Uniprot-TrEMBL)
MAT1A multimersComplexR-HSA-174383 (Reactome)
MNA MetaboliteCHEBI:16797 (ChEBI)
MSDMR-HSA-5357666 (Reactome)
Me2SeMetaboliteCHEBI:4610 (ChEBI)
Me3Se+MetaboliteCHEBI:77058 (ChEBI)
MeHist MetaboliteCHEBI:29009 (ChEBI)
MeHist,N1MNA,MeGlyComplexR-ALL-5359014 (Reactome)
MeOHMetaboliteCHEBI:17790 (ChEBI)
MeSeHMetaboliteCHEBI:64685 (ChEBI)
MeSeHMTR-HSA-5359068 (Reactome)
MeSeO2HMetaboliteCHEBI:77012 (ChEBI)
MeSeOHMetaboliteCHEBI:77062 (ChEBI)
MeSebGalNacMetaboliteCHEBI:77010 (ChEBI)
MeSecMetaboliteCHEBI:27812 (ChEBI)
Met-tRNAi R-NUL-72393 (Reactome)
MetTrans(1)ComplexR-HSA-5359013 (Reactome)
Mg2+ MetaboliteCHEBI:18420 (ChEBI)
NADP+MetaboliteCHEBI:18009 (ChEBI)
NADPHMetaboliteCHEBI:16474 (ChEBI)
NAM MetaboliteCHEBI:17154 (ChEBI)
NH3MetaboliteCHEBI:16134 (ChEBI)
NNMT ProteinP40261 (Uniprot-TrEMBL)
PAPMetaboliteCHEBI:17985 (ChEBI)
PAPSS1 ProteinO43252 (Uniprot-TrEMBL)
PAPSS1,2ComplexR-HSA-174400 (Reactome)
PAPSS2 ProteinO95340 (Uniprot-TrEMBL)
PAPSeMetaboliteCHEBI:28450 (ChEBI)
PAPSeRR-HSA-5359054 (Reactome)
PPiMetaboliteCHEBI:29888 (ChEBI)
PSTK ProteinQ8IV42 (Uniprot-TrEMBL)
PSTK:Mg2+ComplexR-HSA-5359062 (Reactome)
PXLP MetaboliteCHEBI:18405 (ChEBI)
PXLP-CBS ProteinP35520 (Uniprot-TrEMBL)
PiMetaboliteCHEBI:18367 (ChEBI)
QARS ProteinP47897 (Uniprot-TrEMBL)
RARS ProteinP54136 (Uniprot-TrEMBL)
RPL10 ProteinP27635 (Uniprot-TrEMBL)
RPL10A ProteinP62906 (Uniprot-TrEMBL)
RPL11 ProteinP62913 (Uniprot-TrEMBL)
RPL12 ProteinP30050 (Uniprot-TrEMBL)
RPL13 ProteinP26373 (Uniprot-TrEMBL)
RPL13A ProteinP40429 (Uniprot-TrEMBL)
RPL14 ProteinP50914 (Uniprot-TrEMBL)
RPL15 ProteinP61313 (Uniprot-TrEMBL)
RPL17 ProteinP18621 (Uniprot-TrEMBL)
RPL18 ProteinQ07020 (Uniprot-TrEMBL)
RPL18A ProteinQ02543 (Uniprot-TrEMBL)
RPL19 ProteinP84098 (Uniprot-TrEMBL)
RPL21 ProteinP46778 (Uniprot-TrEMBL)
RPL22 ProteinP35268 (Uniprot-TrEMBL)
RPL23 ProteinP62829 (Uniprot-TrEMBL)
RPL23A ProteinP62750 (Uniprot-TrEMBL)
RPL24 ProteinP83731 (Uniprot-TrEMBL)
RPL26 ProteinP61254 (Uniprot-TrEMBL)
RPL26L1 ProteinQ9UNX3 (Uniprot-TrEMBL)
RPL27 ProteinP61353 (Uniprot-TrEMBL)
RPL27A ProteinP46776 (Uniprot-TrEMBL)
RPL28 ProteinP46779 (Uniprot-TrEMBL)
RPL29 ProteinP47914 (Uniprot-TrEMBL)
RPL3 ProteinP39023 (Uniprot-TrEMBL)
RPL30 ProteinP62888 (Uniprot-TrEMBL)
RPL31 ProteinP62899 (Uniprot-TrEMBL)
RPL32 ProteinP62910 (Uniprot-TrEMBL)
RPL34 ProteinP49207 (Uniprot-TrEMBL)
RPL35 ProteinP42766 (Uniprot-TrEMBL)
RPL35A ProteinP18077 (Uniprot-TrEMBL)
RPL36 ProteinQ9Y3U8 (Uniprot-TrEMBL)
RPL36A ProteinP83881 (Uniprot-TrEMBL)
RPL37 ProteinP61927 (Uniprot-TrEMBL)
RPL37A ProteinP61513 (Uniprot-TrEMBL)
RPL38 ProteinP63173 (Uniprot-TrEMBL)
RPL39 ProteinP62891 (Uniprot-TrEMBL)
RPL3L ProteinQ92901 (Uniprot-TrEMBL)
RPL4 ProteinP36578 (Uniprot-TrEMBL)
RPL40 ProteinP62987 (Uniprot-TrEMBL)
RPL41 ProteinP62945 (Uniprot-TrEMBL)
RPL5 ProteinP46777 (Uniprot-TrEMBL)
RPL6 ProteinQ02878 (Uniprot-TrEMBL)
RPL7 ProteinP18124 (Uniprot-TrEMBL)
RPL7A ProteinP62424 (Uniprot-TrEMBL)
RPL8 ProteinP62917 (Uniprot-TrEMBL)
RPL9 ProteinP32969 (Uniprot-TrEMBL)
RPLP0 ProteinP05388 (Uniprot-TrEMBL)
RPLP1 ProteinP05386 (Uniprot-TrEMBL)
RPLP2 ProteinP05387 (Uniprot-TrEMBL)
RPS10 ProteinP46783 (Uniprot-TrEMBL)
RPS11 ProteinP62280 (Uniprot-TrEMBL)
RPS12 ProteinP25398 (Uniprot-TrEMBL)
RPS13 ProteinP62277 (Uniprot-TrEMBL)
RPS14 ProteinP62263 (Uniprot-TrEMBL)
RPS15 ProteinP62841 (Uniprot-TrEMBL)
RPS15A ProteinP62244 (Uniprot-TrEMBL)
RPS16 ProteinP62249 (Uniprot-TrEMBL)
RPS17 ProteinP08708 (Uniprot-TrEMBL)
RPS18 ProteinP62269 (Uniprot-TrEMBL)
RPS19 ProteinP39019 (Uniprot-TrEMBL)
RPS2 ProteinP15880 (Uniprot-TrEMBL)
RPS20 ProteinP60866 (Uniprot-TrEMBL)
RPS21 ProteinP63220 (Uniprot-TrEMBL)
RPS23 ProteinP62266 (Uniprot-TrEMBL)
RPS24 ProteinP62847 (Uniprot-TrEMBL)
RPS25 ProteinP62851 (Uniprot-TrEMBL)
RPS26 ProteinP62854 (Uniprot-TrEMBL)
RPS27 ProteinP42677 (Uniprot-TrEMBL)
RPS27A(77-156) ProteinP62979 (Uniprot-TrEMBL)
RPS28 ProteinP62857 (Uniprot-TrEMBL)
RPS29 ProteinP62273 (Uniprot-TrEMBL)
RPS3 ProteinP23396 (Uniprot-TrEMBL)
RPS3A ProteinP61247 (Uniprot-TrEMBL)
RPS4X ProteinP62701 (Uniprot-TrEMBL)
RPS4Y1 ProteinP22090 (Uniprot-TrEMBL)
RPS5 ProteinP46782 (Uniprot-TrEMBL)
RPS6 ProteinP62753 (Uniprot-TrEMBL)
RPS7 ProteinP62081 (Uniprot-TrEMBL)
RPS8 ProteinP62241 (Uniprot-TrEMBL)
RPS9 ProteinP46781 (Uniprot-TrEMBL)
RPSA ProteinP08865 (Uniprot-TrEMBL)
SARC MetaboliteCHEBI:15611 (ChEBI)
SARS ProteinP49591 (Uniprot-TrEMBL)
SARS dimerComplexR-HSA-379557 (Reactome)
SCLY ProteinQ96I15 (Uniprot-TrEMBL)
SCLY dimer:PXLPComplexR-HSA-5359018 (Reactome)
SECISBP2 ProteinQ96T21 (Uniprot-TrEMBL)
SECISBP2ProteinQ96T21 (Uniprot-TrEMBL)
SEPSECS tetramer:PXLPComplexR-HSA-5357724 (Reactome)
SEPSECS ProteinQ9HD40 (Uniprot-TrEMBL)
SeCystaMetaboliteCHEBI:27760 (ChEBI)
SeHCysMetaboliteCHEBI:9096 (ChEBI)
SeMet-tRNA(Met)R-HSA-5357731 (Reactome)
SeMetMetaboliteCHEBI:30021 (ChEBI)
SeO3(2-)MetaboliteCHEBI:18212 (ChEBI)
Sec MetaboliteCHEBI:16633 (ChEBI)
Sec-tRNA(Sec) R-HSA-5357708 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPComplexR-HSA-5359036 (Reactome)
Sec-tRNA(Sec)R-HSA-5357708 (Reactome)
SecMetaboliteCHEBI:16633 (ChEBI)
Sep-tRNA(Sec)R-HSA-5357712 (Reactome)
Ser-tRNA(Sec)R-HSA-5357730 (Reactome)
TNXRD1:FAD dimerComplexR-HSA-73532 (Reactome)
TXNRD1 ProteinQ16881 (Uniprot-TrEMBL)
acceptorR-NUL-5359011 (Reactome)
aminoacyl-tRNA

synthetase

multienzyme complex
ComplexR-HSA-379688 (Reactome)
bGalNAc derivativeMetaboliteCHEBI:17806 (ChEBI)
bGalNAcMetaboliteCHEBI:28497 (ChEBI)
heme MetaboliteCHEBI:17627 (ChEBI)
pyruvic acidMetaboliteCHEBI:32816 (ChEBI)
reduced acceptorR-NUL-5359016 (Reactome)
tRNA(Met)R-HSA-379742 (Reactome)
tRNA(Sec)R-HSA-5357732 (Reactome)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
2-acetamidoglucalArrowR-HSA-5333612 (Reactome)
2OBUTAArrowR-HSA-2408537 (Reactome)
2OBUTAArrowR-HSA-2408543 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPArrowR-HSA-2408529 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:Sec-tRNA(Sec):EEFSEC:GTPmim-catalysisR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNA:SECISBP2:SecArrowR-HSA-5333615 (Reactome)
80S:Met-tRNAi:mRNAR-HSA-2408529 (Reactome)
ADPArrowR-HSA-2408507 (Reactome)
ADPArrowR-HSA-2408540 (Reactome)
AHCYmim-catalysisR-HSA-2408532 (Reactome)
AMPArrowR-HSA-2408526 (Reactome)
AMPArrowR-HSA-2408546 (Reactome)
APSeArrowR-HSA-2408525 (Reactome)
APSeR-HSA-2408540 (Reactome)
ATPR-HSA-2408507 (Reactome)
ATPR-HSA-2408525 (Reactome)
ATPR-HSA-2408526 (Reactome)
ATPR-HSA-2408540 (Reactome)
ATPR-HSA-2408546 (Reactome)
ATPR-HSA-2408551 (Reactome)
Ade-RibArrowR-HSA-2408532 (Reactome)
AdeSeHCysArrowR-HSA-2408544 (Reactome)
AdeSeHCysR-HSA-2408532 (Reactome)
AdoHcyArrowR-HSA-2408536 (Reactome)
AdoHcyArrowR-HSA-2408541 (Reactome)
AdoHcyArrowR-HSA-2408554 (Reactome)
AdoHcyArrowR-HSA-5333608 (Reactome)
AdoMetR-HSA-2408536 (Reactome)
AdoMetR-HSA-2408541 (Reactome)
AdoMetR-HSA-2408554 (Reactome)
AdoMetR-HSA-5333608 (Reactome)
AdoSeMetArrowR-HSA-2408551 (Reactome)
AdoSeMetR-HSA-2408544 (Reactome)
CBS tetramermim-catalysisR-HSA-2408559 (Reactome)
CTH tetramer:PXLPmim-catalysisR-HSA-2408537 (Reactome)
CTH tetramer:PXLPmim-catalysisR-HSA-2408539 (Reactome)
CTH tetramer:PXLPmim-catalysisR-HSA-2408543 (Reactome)
EEFSEC:GDPArrowR-HSA-5333615 (Reactome)
EEFSEC:GTPR-HSA-2408509 (Reactome)
GSHArrowR-HSA-2408542 (Reactome)
GSHArrowR-HSA-5333608 (Reactome)
GSHR-HSA-2408500 (Reactome)
GSHR-HSA-2408556 (Reactome)
GSR-2:FAD dimermim-catalysisR-HSA-2408542 (Reactome)
GSSGArrowR-HSA-2408500 (Reactome)
GSSGArrowR-HSA-2408556 (Reactome)
GSSeHArrowR-HSA-2408542 (Reactome)
GSSeHR-HSA-2408500 (Reactome)
GSSeHR-HSA-5333607 (Reactome)
GSSeSGArrowR-HSA-2408556 (Reactome)
GSSeSGR-HSA-2408542 (Reactome)
GSSebGalNacArrowR-HSA-5333607 (Reactome)
GSSebGalNacR-HSA-5333608 (Reactome)
H+R-HSA-2408542 (Reactome)
H+R-HSA-2408548 (Reactome)
H+R-HSA-2408556 (Reactome)
H+R-HSA-2408558 (Reactome)
H+R-HSA-5263614 (Reactome)
H+R-HSA-5263616 (Reactome)
H2OArrowR-HSA-2408548 (Reactome)
H2OArrowR-HSA-2408556 (Reactome)
H2OArrowR-HSA-2408558 (Reactome)
H2OArrowR-HSA-2408559 (Reactome)
H2OArrowR-HSA-5263614 (Reactome)
H2OArrowR-HSA-5263616 (Reactome)
H2OR-HSA-2408530 (Reactome)
H2OR-HSA-2408532 (Reactome)
H2OR-HSA-2408537 (Reactome)
H2OR-HSA-2408539 (Reactome)
H2OR-HSA-2408543 (Reactome)
H2OR-HSA-2408551 (Reactome)
H2OR-HSA-2408555 (Reactome)
H2OR-HSA-5333609 (Reactome)
H2OR-HSA-5333615 (Reactome)
H2SeArrowR-HSA-2408500 (Reactome)
H2SeArrowR-HSA-2408524 (Reactome)
H2SeArrowR-HSA-2408530 (Reactome)
H2SeArrowR-HSA-2408558 (Reactome)
H2SeO4R-HSA-2408525 (Reactome)
H2SeR-HSA-2408536 (Reactome)
H3PO4ArrowR-HSA-2408555 (Reactome)
H3SePO3R-HSA-2408555 (Reactome)
HSeMTmim-catalysisR-HSA-2408536 (Reactome)
Hist,NAM,GlyR-HSA-2408544 (Reactome)
INMTmim-catalysisR-HSA-2408554 (Reactome)
L-AlaArrowR-HSA-2408524 (Reactome)
L-SerR-HSA-2408526 (Reactome)
L-SerR-HSA-2408559 (Reactome)
MAT1A multimersmim-catalysisR-HSA-2408551 (Reactome)
MSDMmim-catalysisR-HSA-2408530 (Reactome)
Me2SeArrowR-HSA-2408541 (Reactome)
Me2SeR-HSA-2408554 (Reactome)
Me3Se+ArrowR-HSA-2408554 (Reactome)
MeHist,N1MNA,MeGlyArrowR-HSA-2408544 (Reactome)
MeOHArrowR-HSA-2408530 (Reactome)
MeSeHArrowR-HSA-2408536 (Reactome)
MeSeHArrowR-HSA-2408537 (Reactome)
MeSeHArrowR-HSA-2408539 (Reactome)
MeSeHArrowR-HSA-5263614 (Reactome)
MeSeHArrowR-HSA-5333609 (Reactome)
MeSeHMTmim-catalysisR-HSA-2408541 (Reactome)
MeSeHR-HSA-2408530 (Reactome)
MeSeHR-HSA-2408541 (Reactome)
MeSeO2HArrowR-HSA-5333612 (Reactome)
MeSeO2HR-HSA-5263616 (Reactome)
MeSeOHArrowR-HSA-5263616 (Reactome)
MeSeOHR-HSA-5263614 (Reactome)
MeSebGalNacArrowR-HSA-5333608 (Reactome)
MeSebGalNacR-HSA-5333609 (Reactome)
MeSebGalNacR-HSA-5333612 (Reactome)
MeSecR-HSA-2408539 (Reactome)
MetTrans(1)mim-catalysisR-HSA-2408544 (Reactome)
NADP+ArrowR-HSA-2408542 (Reactome)
NADP+ArrowR-HSA-2408548 (Reactome)
NADP+ArrowR-HSA-2408558 (Reactome)
NADP+ArrowR-HSA-5263614 (Reactome)
NADP+ArrowR-HSA-5263616 (Reactome)
NADPHR-HSA-2408542 (Reactome)
NADPHR-HSA-2408548 (Reactome)
NADPHR-HSA-2408558 (Reactome)
NADPHR-HSA-5263614 (Reactome)
NADPHR-HSA-5263616 (Reactome)
NH3ArrowR-HSA-2408537 (Reactome)
NH3ArrowR-HSA-2408539 (Reactome)
NH3ArrowR-HSA-2408543 (Reactome)
PAPArrowR-HSA-2408548 (Reactome)
PAPSS1,2mim-catalysisR-HSA-2408525 (Reactome)
PAPSS1,2mim-catalysisR-HSA-2408540 (Reactome)
PAPSeArrowR-HSA-2408540 (Reactome)
PAPSeR-HSA-2408548 (Reactome)
PAPSeRmim-catalysisR-HSA-2408548 (Reactome)
PPiArrowR-HSA-2408525 (Reactome)
PPiArrowR-HSA-2408526 (Reactome)
PPiArrowR-HSA-2408546 (Reactome)
PPiArrowR-HSA-2408551 (Reactome)
PSTK:Mg2+mim-catalysisR-HSA-2408507 (Reactome)
PiArrowR-HSA-2408551 (Reactome)
PiArrowR-HSA-5333615 (Reactome)
R-HSA-2408500 (Reactome) Gluthathioselenol (GSSeH) and reduced glutathione (GSH) condense to form hydrogen selenide (H2Se) and glutathione disulfide (GSSG). This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408507 (Reactome) L-seryl-tRNA(Sec) kinase (PSTK) phosphorylates the serylated transfer RNA (tRNA) for Sec (Ser-tRNASec) to form Sep-tRNASec in the presence of ATP and Mg2+. PSTK exhibits a strict selectivity for Ser-tRNASec. It does not phosphorylate free Ser or Ser attached to its cognate tRNASer. This reaction involving PSTK is inferred from the equivalent reaction in mouse.
R-HSA-2408509 (Reactome) The final product, selenocysteinyl transfer RNA (tRNA) for Sec (Sec-tRNASec) binds to selenocysteine-specific elongation factor (EEFSEC) aka SelB complexed with GTP. This complex is now ready to be delivered to the 80S ribosome. This reaction is inferred from the equivalent reaction in mouse.
R-HSA-2408524 (Reactome) Selenocysteine lyase (SCLY) homodimer is involved in the reduction of selenocysteine (Sec) to hydrogen selenide (H2Se) and alanine (Ala) (Daher and Van Lente 1992).
R-HSA-2408525 (Reactome) Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthases 1 and 2 (PAPSS1,2) (Venkatachalam et al. 1998, Xu et al. 2000) are involved in transforming adenosine triphosphate (ATP) and selenic acid (H2SeO4) into adenylylselenate (APSe) and diphosphate via its ATP sulphurylase domain. This reaction is inferred from the event in rat (Yu et al. 1989).
R-HSA-2408526 (Reactome) The synthetic cycle of selenocysteine (Sec) synthesis starts with misacylation (serylation) of the cognate transfer RNA (tRNA) for Sec, tRNASec, with serine (Ser) by Serine--tRNA ligase (SARS) homodimer. The structural homology of tRNASec and tRNASer enables SARS to form Ser-tRNASec (Vincent et al. 1997, Amberg et al. 1996, Heckl et al. 1998).
R-HSA-2408529 (Reactome) The complex consisting of selenocysteinyl (Sec) transfer RNA (tRNA) for Sec (Sec-tRNASec), selenocysteine-specific elongation factor (EEFSEC) aka SelB, selenocysteine insertion sequence-binding protein 2 (SECISBP2) aka SBP2 and GTP interacts with the 80S ribosomal protein complex (80S:Met-tRNAi:mRNA). This reaction is inferred from events occurring in rats.
R-HSA-2408530 (Reactome) A yet to be identified enzyme with methylselenol demethylase (MSDM) activity is involved in the hydrolysis of methylselenol aka methaneselenol (MeSeH) into hydrogen selenide (H2Se) and methanol. This reaction is inferred from the event in rat (Suzuki et al. 2007, Ohta and Suzuki 2008).
R-HSA-2408532 (Reactome) Adenosylhomocysteinase (AHCY) is involved in the hydrolysis of adenosylselenohomocysteine (AdeSeHCys) into adenosine and selenohomocysteine (SeHCys). This reaction is inferred from the event in rat involving the protein adenosylhomocysteinase (Ahcy) (Kajander et al. 1991, Kajander and Raina 1981).
R-HSA-2408536 (Reactome) A yet to be identified enzyme with hydrogen selenide methyltransferase (HSeMT) activity is involved in the methylation of hydrogen selenide (H2Se) into methylselenol aka methaneselenol (MeSeH) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in rat (Ohta and Suzuki 2008, Hsieh and Ganther 1977).
R-HSA-2408537 (Reactome) Excess selenomethionine (SeMet) undergoes an alpha,gamma-elimination reaction by cystathionine gamma-lyase (CTH) to produce methylselenol aka methaneselenol (MeSeH), ammonia, and 2-oxobutanoic acid. This reaction is inferred from the event in mouse involving the protein cystathionine gamma-lyase (Cth) (Okuno et al. 2001, Okuno et al. 2005, Okuno et al. 2006).
R-HSA-2408539 (Reactome) Methylselenocysteine (MeSec) undergoes an alpha,gamma-elimination reaction by cystathionine gamma-lyase (CTH) to produce methylselenol aka methaneselenol (MeSeH), ammonia, and pyruvic acid. This reaction is inferred from the event in rat involving the protein cystathionine gamma-lyase (Cth) (Pinto et al. 2011, Suzuki et al. 2007).
R-HSA-2408540 (Reactome) Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthases 1 and 2 (PAPSS1,2) (Venkatachalam et al. 1998, Xu et al. 2000) are involved in phosphorylating adenylylselenate (APSe) into 3'-phosphoadenylyl selenate (PAPSe) via its APS kinase domain. This reaction is inferred from the event in Penicillium chrysogenum involving APS kinase (Kaps) (Yu et al. 1989).
R-HSA-2408541 (Reactome) A yet to be identified enzyme with methylselenol methyltransferase (MeSeHMT) activity is involved in the methylation of methylselenol aka methaneselenol (MeSeH) into dimethyl selenide (Me2Se) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in rat (Ohta and Suzuki 2008, Hsieh and Ganther 1977).
R-HSA-2408542 (Reactome) Glutathione reductase (GSR) homodimer is involved in the reduction of selenodiglutathione (GSSeSG) into gluthathioselenol (GSSeH) and reduced glutathione (GSH). This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408543 (Reactome) Cystathionine gamma-lyase (CTH) homotetramer is involved in the hydrolysis of selenocystathionine (SeCysta) into selenocysteine (Sec), ammonia and 2-oxobutanoic acid by an alpha,gamma-elimination reaction. This reaction is inferred from the event in rat involving the protein cystathionine gamma-lyase (Cth) homotetramer (Esaki et al. 1981).
R-HSA-2408544 (Reactome) A set of methyltransferases (MetTrans(1)) consisting of the proteins histamine-N-methyltransferase (HNMT), glycine-N-methyltransferase (GNMT), and nicotinamide-N-methyltransferase (NNMT) remove a methyl group from adenosylselenomethionine (AdoSeMet) to leave adenosylselenohomocysteine (AdeSeHCys). This reaction is inferred from the event in rat involving the set of methyltransferases (MetTrans(2)) consisting of the proteins histamine-N-methyltransferase (Hnmt), glycine-N-methyltransferase (Gnmt), and nicotinamide-N-methyltransferase (Nnmt) (Kajander et al. 1991).
R-HSA-2408546 (Reactome) The multisynthetase complex consists of bifunctional glutamyl-prolyl-tRNA synthetase, the monospecific isoleucyl, leucyl, glutaminyl, methionyl, lysyl, arginyl, and aspartyl-tRNA synthetases as well as three auxiliary proteins, p18, p48 and p43. It is involved in the selenomethionylation of tRNA(Met) into selenomethionyl-tRNA(Met) (SeMet-tRNA(Met)). This reaction is inferred from the event in mung bean (Burnell 1981) and in wheat germ (Eustice et al. 1981).
R-HSA-2408548 (Reactome) A yet to be identified enzyme with 3'-phosphoadenylyl selenate reductase (PAPSeR) activity is involved in the reduction of 3'-phosphoadenylyl selenate (PAPSe) into selenite (SeO3(2-)) and adenosine 3',5'-bismonophosphate (PAP). This reaction is inferred from the event in yeast (Banszky et al. 2003).
R-HSA-2408551 (Reactome) Methionine adenosyltransferases (MAT multimers) consisting of a S-adenosylmethionine synthase isoform type-1 (MAT1A) homodimer and a MAT1A: S-adenosylmethionine synthase isoform type-2 (MAT2A) heterodimer are responsible for the conversion of selenomethionine (SeMet) and ATP into Se-adenosylselenomethionine (AdoSeMet), orthophosphate (Pi), and diphosphate (PPi) (Kajander et al. 1990).
R-HSA-2408554 (Reactome) Indolethylamine N-methyltransferase (INMT) is involved in the methylation of dimethyl selenide (Me2Se) into trimethylselenonium (Me3Se+) in tandem with S-adenosylmethionine (AdoMet) transforming into S-adenosylhomocysteine (AdoHcy). This reaction is inferred from the event in mouse (Mozier et al. 1988).
R-HSA-2408555 (Reactome) O-phosphoseryl-tRNA(Sec) selenium transferase (SEPSECS) tetramer catalyses the transformation of phosphoserine (Sep) into selenocysteine (Sec) by using selenophosphate (SePO3) as a selenium donor to convert the phosphoserylated transfer RNA (tRNA) for Sec (Sep-tRNASec) into Sec-tRNASec (Palioura et al. 2009, Yuan et al. 2006).
R-HSA-2408556 (Reactome) Selenite (SeO3(2-)) and reduced glutathione (GSH) spontaneously react to form selenodiglutathione (GSSeSG) and glutathione disulfide (GSSG). This has been proposed to be the major form of entry of selenium compounds into metabolism. This reaction is inferred from the event in rat (Bjornstedt et al. 1992).
R-HSA-2408558 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer (Sun et al. 1999) is involved in the reduction of selenite (SeO3(2-)) into hydrogen selenide (H2Se). This reaction is inferred from the event in cow (Kumar et al. 1992).
R-HSA-2408559 (Reactome) Cystathionine beta-synthase (CBS) is involved in the dehydration of selenohomocysteine (SeHCys) and serine that produces selenocystathionine (SeCysta). This reaction is inferred from the event in rat involving the protein cystathionine beta-synthase (Cbs) (Esaki et al. 1981).
R-HSA-5263614 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer is involved in the reduction of methylselenenic acid (MeSeOH) into methylselenol (MeSeH) (Gromer and Gross 2002).
R-HSA-5263616 (Reactome) Thioredoxin reductase 1 (TXNRD1) homodimer is involved in the reduction of methylseleninic acid (MeSeO2H) into methylselenenic acid (MeSeOH) (Gromer and Gross 2002).
R-HSA-5333607 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (bGalNAc ) derivative combines with glutathioselenol (GSSeH) to form 1beta-glutathionylseleno-N-acetyl-D-galactosamine (GSSebGalNac) aka selenosugar A by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Kobayashi et al. 2002).
R-HSA-5333608 (Reactome) 1beta-glutathionylseleno-N-acetyl-D-galactosamine (GSSebGalNac) aka selenosugar A is converted into 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Kobayashi et al. 2002).
R-HSA-5333609 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B is hydrolysed to methylselenol (MeSeH) and N-acetyl-beta-D-galactosamine (bGalNac) by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Suzuki et al. 2006).
R-HSA-5333612 (Reactome) 1beta-methylseleno-N-acetyl-D-galactosamine (MeSebGalNac) aka selenosugar B is oxidatively cleaved to methylseleninic acid (MeSeO2H) and 2-acetamidoglucal by an unknown mechanism. The actual enzyme or enzymes involved have yet to be identified. This reaction is inferred from the event in rat (Suzuki et al. 2006).
R-HSA-5333615 (Reactome) The complex consisting of selenocysteinyl (Sec) transfer RNA (tRNA) for Sec (Sec-tRNASec), selenocysteine-specific elongation factor (EEFSEC) aka SelB, selenocysteine insertion sequence-binding protein 2 (SECISBP2) aka SBP2 and GTP interacts with the 80S ribosomal protein complex (80S:Met-tRNAi:mRNA). This triggers the hydrolysis of GTP (to GDP) by EEFSEC and delivery of Sec-tRNASec to the ribosomal A site. Before the Sec residue is inserted into the nascent polypeptide chain, EEFSEC:GDP is released. This reaction is inferred from events occurring in rats.
SARS dimermim-catalysisR-HSA-2408526 (Reactome)
SCLY dimer:PXLPmim-catalysisR-HSA-2408524 (Reactome)
SECISBP2R-HSA-2408529 (Reactome)
SEPSECS tetramer:PXLPmim-catalysisR-HSA-2408555 (Reactome)
SeCystaArrowR-HSA-2408559 (Reactome)
SeCystaR-HSA-2408543 (Reactome)
SeHCysArrowR-HSA-2408532 (Reactome)
SeHCysR-HSA-2408559 (Reactome)
SeMet-tRNA(Met)ArrowR-HSA-2408546 (Reactome)
SeMetR-HSA-2408537 (Reactome)
SeMetR-HSA-2408546 (Reactome)
SeMetR-HSA-2408551 (Reactome)
SeO3(2-)ArrowR-HSA-2408548 (Reactome)
SeO3(2-)R-HSA-2408556 (Reactome)
SeO3(2-)R-HSA-2408558 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPArrowR-HSA-2408509 (Reactome)
Sec-tRNA(Sec):EEFSEC:GTPR-HSA-2408529 (Reactome)
Sec-tRNA(Sec)ArrowR-HSA-2408555 (Reactome)
Sec-tRNA(Sec)R-HSA-2408509 (Reactome)
SecArrowR-HSA-2408543 (Reactome)
SecR-HSA-2408524 (Reactome)
Sep-tRNA(Sec)ArrowR-HSA-2408507 (Reactome)
Sep-tRNA(Sec)R-HSA-2408555 (Reactome)
Ser-tRNA(Sec)ArrowR-HSA-2408526 (Reactome)
Ser-tRNA(Sec)R-HSA-2408507 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-2408558 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-5263614 (Reactome)
TNXRD1:FAD dimermim-catalysisR-HSA-5263616 (Reactome)
acceptorArrowR-HSA-2408524 (Reactome)
aminoacyl-tRNA

synthetase

multienzyme complex
mim-catalysisR-HSA-2408546 (Reactome)
bGalNAc derivativeR-HSA-5333607 (Reactome)
bGalNAcArrowR-HSA-5333609 (Reactome)
pyruvic acidArrowR-HSA-2408539 (Reactome)
reduced acceptorR-HSA-2408524 (Reactome)
tRNA(Met)R-HSA-2408546 (Reactome)
tRNA(Sec)ArrowR-HSA-5333615 (Reactome)
tRNA(Sec)R-HSA-2408526 (Reactome)
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