B cell receptor signaling pathway (Rattus norvegicus)

From WikiPathways

Revision as of 13:20, 6 October 2016 by Mkutmon (Talk | contribs)
Jump to: navigation, search
CY->PMCY->PMProteolytic cleavageMitochondriaCY->NUDERGODPMCY->NUCY->PMPM->CYPM->CYCY->NUDCY->PMDNUCY->PMENComplexCY->NUDemethylationEndosomeARP2/3RecruitmentPalmitoylationAcetylationGolgi apparatusDCY->PMMolecule in the pathwayDECCYReaction through unknown mechanisms/moleculesDesumoylationReceptorControlDGlycosylationProteins in a complex interactionUbiquitinationAccesion Number: NetPath 12CY->PMPlasma membraneMolecular associationPhosphorylationCY->PMDMTDeacetylationTranslocation(Protein-protein interaction)ExtracellularEnzyme ComplexCY->NUDephosphorylationCY->PMDAutophosphorylationCY->MTNucleusCY->PMCY->PMCY->PMDLigandDDSumoylationNU->CYCY->PMDMAInhibitionCY->NUMethylationCY->PMCytoplasmEndoplasmic reticulumDCY->NUCY->PMCY->PMDeubiquitinationCY->PMMT->CYNU->CYDCY->NUActivationCY->PMDIkbkgStap1Lat2Actr3PrkcqGtf2iPip4k2bElk1Gene 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-6stPrkcbNFATC1Cd72Sos1Ccnd3HckRaf1Arpc4Gab1Creb1LynRelaPdk2Pip4k2bCcna2RelaMapk4JunCdk2Map2k2Map3k7Stat1Dusp6TecRelNfkbiaRhoaMap4k1Plcg1Gab1LckItpr1Ppp3cbCblbPlekha1PILRBCdk6Cd79aPrkcdMap2k1


Description

The functional B-cell receptor is a multi-protein complex consisting of an antigen binding subunit and a signaling subunit. The antigen binding subunit is the membrane bound immunoglobulin and the signaling subunit consists of the Igα and Igβ proteins, which are covalently bound to each other. Both Igα and Igβ proteins have an immunoreceptor tyrosine -based activation motif (ITAM) each in its cytoplasmic region, which is responsible for the initiation and propagation of signaling. Antigen binding to the immunoglubulin results in the aggregation of both the immunoglobulin and the Igα/β subunits. This results in the phosphorylation of the tyrosine residues in the ITAM motif of the Igα/β subunits by the src-family of protein tyrosine kinases Lyn and Syk. The Src family kinases are initially in the proximity of the BCR as a result of membrane anchoring by virtue of its their acetylation. The N-terminal region of the kinases can also interact with the non-phosphorylated ITAMs of Igα. This association is further enhanced upon BCR engagement as a result of accumulation in BCR containing lipid rafts and SH2 domain mediated binding to the phosphorylated tyrosine residues in ITAMs. This increased association helps in amplifying the BCR mediated signaling. Doubly phosphorylated Igα/β ITAMs are necessary for efficient recruitment of Syk and its activation. Activated Syk then phsophorylates the adapter molecule B cell linker protein (BLNK), which acts as molecular scaffold for the recruitment of multiple effectors and hence the propagation of multiple signaling pathways. BLNK binds to Btk and PLCγ2 which results in optimal phosphorylation and activation of PLC. This is an important mechanism which links BCR to Ca2+ signaling. Apart from the PLC mediated Ca2+ signaling, BCR triggering also results in the the activaion of phosphatidylinositol-3 kinase (PI-3K). This activation takes place through the recruitment of p85 adaptor subunit of PI-3K to CD19 co-receptor, which is phosphorylated by Lyn on its cytoplasmic Y-X-X-M motif. Alternatively, PI-3K can be recruited to the plasma membrane by other adapter molecules including PIK3AP, CBL or GAB1/2. PI-3K catalyzes the phosphorylation of phosphatidylinositol 4,5-bisphosphate to phosphatidyl inositol 3,4,5-bisphosphate. Akt, a serine threonine kinase, is recruited to the plasma membrane by virtue of its N-terminal PH-domain where it is activated by conformational changes and phosphorylation. Activated Akt phosphorylates several substrates resulting in diverse physiological consequences: Forkhead transcription factors - resulting in its degradation and hence inhibition of expression of pro-apoptotic genes, glycogen synthase kinase-3 GSK3 -leading to its inhibition and hence regulation of cell-cycle. The tanscription factor NF-kappaB is also found to be activated in BCR signaling in a Btk, PI-3K and PKC dependent manner.

BCR engagement can also result in the association of GRB2/SOS complex with either SHC or BLNK, which results in the activation of the Ras/Raf/MEK/ERK signaling cascade. This cascade leads to the activation of transcription factors including ELK and MYC. BCR activation also results in the activation of JNKs and p38MAPK.


Please access this pathway at NetSlim database.

If you use this pathway, you must cite following paper:

Kandasamy, K., Mohan, S. S., Raju, R., Keerthikumar, S., Kumar, G. S. S., Venugopal, A. K., Telikicherla, D., Navarro, J. D., Mathivanan, S., Pecquet, C., Gollapudi, S. K., Tattikota, S. G., Mohan, S., Padhukasahasram, H., Subbannayya, Y., Goel, R., Jacob, H. K. C., Zhong, J., Sekhar, R., Nanjappa, V., Balakrishnan, L., Subbaiah, R., Ramachandra, Y. L., Rahiman, B. A., Prasad, T. S. K., Lin, J., Houtman, J. C. D., Desiderio, S., Renauld, J., Constantinescu, S. N., Ohara, O., Hirano, T., Kubo, M., Singh, S., Khatri, P., Draghici, S., Bader, G. D., Sander, C., Leonard, W. J. and Pandey, A. (2010). NetPath: A public resource of curated signal transduction pathways. Genome Biology. 11:R3.

Comments

GenMAPP notes 
NetPath 12 - B Cell Receptor Signaling pathway. NetPath (http://www.netpath.org) is a collaborative project between PandeyLab at Johns Hopkins University (http://pandeylab.igm.jhmi.edu) and the Institute of Bioinformatics (http://www.ibioinformatics.org). If you use this pathway, you must cite the NetPath website until the pathway is published.
GenMAPP remarks 
http://www.netpath.org
HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP23(r20725) with a 92% conversion rate.

Try the New WikiPathways

View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

No bibliography


History

View all...
CompareRevisionActionTimeUserComment
116941view10:03, 16 May 2021EweitzModified title
89912view13:25, 6 October 2016MkutmonModified description
89902view13:20, 6 October 2016MkutmonModified description
83939view22:47, 4 January 2016MaintBotminor
67073view10:02, 26 June 2013Christine ChichesterOntology Term : 'B cell receptor signaling pathway' added !
41776view02:42, 2 March 2011MaintBotRemoved redundant pathway information and comments
35702view23:13, 12 February 2010AlexanderPico
34144view19:34, 9 December 2009MaintBotAutomatic update of empty xrefs
31422view20:58, 13 August 2009MaintBotFixed text labels
30969view00:49, 30 July 2009MaintBotConverted from Homo sapiens
21279view11:31, 14 November 2008MaintBot[[Pathway:Rattus norvegicus:B Cell Receptor NetPath 12]] moved to [[Pathway:WP285]]: Moved to stable identifier
7918view13:46, 7 January 2008MaintBot[[Pathway:Rat:B Cell Receptor NetPath 12]] moved to [[Pathway:Rattus norvegicus:B Cell Receptor NetPath 12]]: Renaming species
7584view16:02, 18 December 2007MaintBotfixed category names
7203view12:33, 4 November 2007MaintBotAdded categories to GPML
6520view22:19, 22 May 2007A.Pandeygpml file for [[Rat:B_Cell_Receptor_NetPath_12]]

External references

DataNodes

View all...
NameTypeDatabase referenceComment
Actr2GeneProduct289820 (Entrez Gene)
Actr3GeneProduct81732 (Entrez Gene)
Akt1GeneProduct24185 (Entrez Gene)
Arpc1bGeneProduct54227 (Entrez Gene)
Arpc2GeneProduct301511 (Entrez Gene)
Arpc3GeneProduct288669 (Entrez Gene)
Arpc4GeneProduct297518 (Entrez Gene)
Arpc5GeneProduct360854 (Entrez Gene)
Atf2GeneProduct81647 (Entrez Gene)
Atp2b4GeneProduct29600 (Entrez Gene)
BaxGeneProduct24887 (Entrez Gene)
Bcar1GeneProduct25414 (Entrez Gene)
Bcl10GeneProduct83477 (Entrez Gene)
Bcl2GeneProduct24224 (Entrez Gene)
Bcl2l11GeneProduct64547 (Entrez Gene)
Bcl6GeneProduct303836 (Entrez Gene)
BlkGeneProduct364403 (Entrez Gene)
BlnkGeneProduct499356 (Entrez Gene)
BrafGeneProduct114486 (Entrez Gene)
BtkGeneProduct367901 (Entrez Gene)
CARD11GeneProduct304314 (Entrez Gene)
Casp7GeneProduct64026 (Entrez Gene)
Casp9GeneProduct58918 (Entrez Gene)
CblGeneProduct500985 (Entrez Gene)
CblbGeneProduct171136 (Entrez Gene)
Ccna2GeneProduct114494 (Entrez Gene)
Ccnd2GeneProduct64033 (Entrez Gene)
Ccnd3GeneProduct25193 (Entrez Gene)
Ccne1GeneProduct25729 (Entrez Gene)
Cd19GeneProduct365367 (Entrez Gene)
Cd22GeneProduct308501 (Entrez Gene)
Cd5GeneProduct54236 (Entrez Gene)
Cd72GeneProduct313498 (Entrez Gene)
Cd79aGeneProduct681236 (Entrez Gene)
Cd79bGeneProduct171055 (Entrez Gene)
Cd81GeneProduct25621 (Entrez Gene)
Cdk2GeneProduct362817 (Entrez Gene)
Cdk4GeneProduct94201 (Entrez Gene)
Cdk6GeneProduct114483 (Entrez Gene)
Cdk7GeneProduct171150 (Entrez Gene)
ChukGeneProduct309361 (Entrez Gene)
Cmtm3GeneProduct291813 (Entrez Gene)
Cr2GeneProduct289395 (Entrez Gene)
Creb1GeneProduct81646 (Entrez Gene)
CrkGeneProduct54245 (Entrez Gene)
CrklGeneProduct287942 (Entrez Gene)
CskGeneProduct315707 (Entrez Gene)
Ctnnb1GeneProduct84353 (Entrez Gene)
CycsGeneProduct25309 (Entrez Gene)
Dapp1GeneProduct362046 (Entrez Gene)
Dok1GeneProduct312477 (Entrez Gene)
Dok3GeneProduct306760 (Entrez Gene)
Dusp4GeneProduct60587 (Entrez Gene)
Dusp6GeneProduct116663 (Entrez Gene)
Elk1GeneProduct314436 (Entrez Gene)
Fcgr2bGeneProduct289211 (Entrez Gene)
Foxo1GeneProduct84482 (Entrez Gene)
FynGeneProduct25150 (Entrez Gene)
Gab1GeneProduct361388 (Entrez Gene)
Gab2GeneProduct84477 (Entrez Gene)
Galnac4s-6stGeneProduct286974 (Entrez Gene)
Gene SymbolGeneProduct
Grb2GeneProduct81504 (Entrez Gene)
Gsk3aGeneProduct50686 (Entrez Gene)
Gsk3bGeneProduct84027 (Entrez Gene)
Gtf2iGeneProduct353256 (Entrez Gene)
HDAC5GeneProduct84580 (Entrez Gene)
HckGeneProduct25734 (Entrez Gene)
Hcls1GeneProduct288077 (Entrez Gene)
Hdac7GeneProduct84582 (Entrez Gene)
HnrnpkGeneProduct117282 (Entrez Gene)
IGHMGeneProduct
IkbkbGeneProduct84351 (Entrez Gene)
IkbkgGeneProduct309295 (Entrez Gene)
Inpp5dGeneProduct54259 (Entrez Gene)
ItkGeneProduct363577 (Entrez Gene)
Itpr1GeneProduct25262 (Entrez Gene)
Itpr2GeneProduct81678 (Entrez Gene)
JunGeneProduct24516 (Entrez Gene)
LOC365948GeneProduct365948 (Entrez Gene)
Lat2GeneProduct317676 (Entrez Gene)
LckGeneProduct313050 (Entrez Gene)
Lcp2GeneProduct155918 (Entrez Gene)
Lime1GeneProduct362289 (Entrez Gene)
LynGeneProduct81515 (Entrez Gene)
Map2k1GeneProduct170851 (Entrez Gene)
Map2k2GeneProduct58960 (Entrez Gene)
Map3k7GeneProduct313121 (Entrez Gene)
Map4k1GeneProduct292763 (Entrez Gene)
Mapk1GeneProduct116590 (Entrez Gene)
Mapk14GeneProduct81649 (Entrez Gene)
Mapk3GeneProduct50689 (Entrez Gene)
Mapk4GeneProduct54268 (Entrez Gene)
Mapk8GeneProduct116554 (Entrez Gene)
Mapkapk2GeneProduct289014 (Entrez Gene)
NFATC1GeneProduct
Nck1GeneProduct300955 (Entrez Gene)
Nedd9GeneProduct291044 (Entrez Gene)
Nfatc2GeneProduct311658 (Entrez Gene)
Nfatc3GeneProduct361400 (Entrez Gene)
NfkbiaGeneProduct25493 (Entrez Gene)
PILRBGeneProduct288554 (Entrez Gene)
PIP5K1AGeneProduct365865 (Entrez Gene)
PLEKHA2GeneProduct
Pdk2GeneProduct81530 (Entrez Gene)
Pdpk1GeneProduct81745 (Entrez Gene)
Pik3ap1GeneProduct294048 (Entrez Gene)
Pik3cgGeneProduct298947 (Entrez Gene)
Pik3r1GeneProduct25513 (Entrez Gene)
Pik3r2GeneProduct29741 (Entrez Gene)
Pip4k2aGeneProduct116723 (Entrez Gene)
Pip4k2bGeneProduct89812 (Entrez Gene)
Pip4k2cGeneProduct140607 (Entrez Gene)
Pip5k1bGeneProduct309419 (Entrez Gene)
Pip5k1cGeneProduct314641 (Entrez Gene)
Plcg1GeneProduct25738 (Entrez Gene)
Plcg2GeneProduct29337 (Entrez Gene)
Plekha1GeneProduct361659 (Entrez Gene)
Ppp3caGeneProduct24674 (Entrez Gene)
Ppp3cbGeneProduct24675 (Entrez Gene)
Ppp3r1GeneProduct29748 (Entrez Gene)
PrkcbGeneProduct25023 (Entrez Gene)
PrkcdGeneProduct170538 (Entrez Gene)
PrkceGeneProduct29340 (Entrez Gene)
PrkcqGeneProduct85420 (Entrez Gene)
Prkd1GeneProduct85421 (Entrez Gene)
Ptk2GeneProduct25614 (Entrez Gene)
Ptk2bGeneProduct50646 (Entrez Gene)
Ptpn11GeneProduct25622 (Entrez Gene)
Ptpn18GeneProduct301333 (Entrez Gene)
Ptpn6GeneProduct116689 (Entrez Gene)
PtprcGeneProduct24699 (Entrez Gene)
RAP2AGeneProduct114560 (Entrez Gene)
RAPGEF1GeneProduct63881 (Entrez Gene)
RGD1562071GeneProduct499931 (Entrez Gene)
Raf1GeneProduct24703 (Entrez Gene)
Rasa1GeneProduct25676 (Entrez Gene)
Rasgrp3GeneProduct313874 (Entrez Gene)
Rb1GeneProduct24708 (Entrez Gene)
RelGeneProduct305584 (Entrez Gene)
RelaGeneProduct309165 (Entrez Gene)
RhoaGeneProduct117273 (Entrez Gene)
Rps6GeneProduct29304 (Entrez Gene)
Rps6ka1GeneProduct81771 (Entrez Gene)
Rps6kb1GeneProduct83840 (Entrez Gene)
SOS2GeneProduct85384 (Entrez Gene)
Sh2b2GeneProduct114203 (Entrez Gene)
Sh3bp2GeneProduct305450 (Entrez Gene)
Shc1GeneProduct85385 (Entrez Gene)
Sos1GeneProduct313845 (Entrez Gene)
Stap1GeneProduct305269 (Entrez Gene)
Stat1GeneProduct25124 (Entrez Gene)
Stat3GeneProduct25125 (Entrez Gene)
SykGeneProduct25155 (Entrez Gene)
TecGeneProduct84492 (Entrez Gene)
Vav1GeneProduct25156 (Entrez Gene)
Vav2GeneProduct296603 (Entrez Gene)
WASGeneProduct317371 (Entrez Gene)
Zap70GeneProduct301348 (Entrez Gene)

Annotated Interactions

No annotated interactions
Personal tools